Protobothrops mucrosquamatus (Taiwan habu): 107291711
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Entry
107291711 CDS
T05763
Symbol
COL6A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(VI) chain
KO
K06238
collagen type VI alpha
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04510
Focal adhesion
pmur04512
ECM-receptor interaction
pmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107291711 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107291711 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107291711 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmur04147
]
107291711 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
pmur00536
]
107291711 (COL6A3)
Exosome [BR:
pmur04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107291711 (COL6A3)
Glycosaminoglycan binding proteins [BR:
pmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107291711 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
107291711 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
vWA_SIBA-E
fn3
Motif
Other DBs
NCBI-GeneID:
107291711
NCBI-ProteinID:
XP_029140835
LinkDB
All DBs
Position
Unknown
AA seq
2918 aa
AA seq
DB search
MKKYHHLIFATICCLLLSGNHEADAQQKETTQESADIIFLIDGSKNGAVTFSAIRDFIAN
LIERLSVGAELIRIGVVMFSDEPRTVFSLNSYTQKVDILEAVKALSILGGEEANIGDALD
FVMQNHFTHSGGSRIEEGVPQILVLISSIESSDDIREGVLAMKQASIFSFCIGVQNADNA
ELQQIATDASFIFTALDTRNLGELQELLLPNIVGVAQRLILLDAPTILTEVVEVNKRDIV
FLIDGSTALGSAPFNAIRDFVAKIINRMEIGPDLIQVAVAQYADSVRPEFYFNSFQTKKD
IATNVRKIKPMGGTTLNTGSALRFVKDNFFTSAAGARIDEGVLPMLILITGGVSRDDVVQ
PTQEIKKNGIVVLAVGARNADRTELEKIAYEPSLVFTPTEFRTVALTVIIPDVLSSIRSL
PIKIWEIPSTEGNFFVTKRDIVFLLDGSVNVGNTNFPYVRDFLVNLVNSLDVGIDDVRIG
LVQFSENPKTEFFLNSFLTKADVLSRLRQLRLQGGSILNSGAALDFVRSNHFTETGGSRK
DENVPQVLVFLAAGPSADAFQDAANALARARVLTFCVGVRNAKLAELQQIAFNPQIVYFK
DEFSSLPALPQEMISPLTTYVSGDVEEITITLTENKIDILFLIDGSMNVAGQFPAVREFV
FQIISDLTVGPDAVRVSVAQFSDNVNVEFNFDVPSKIEILQKVRKMRMKGGRLLNIGAAL
DYAIKDIFVRHAGSRIEEGVPQFLVLLVAGRSDDIVDESADTLKQTGVITFVIQTKTSDP
VELEKIVYAPQFILKADTLSQIGDIQPEIVNLLKTIELKPQAQKKNDVFLIDGSDGSRSG
STXFNTFEQRIADSLEIGPDKVQVAMTQHSDTINLEFLLDEYCDKIEVIKVIQRLFPMGS
SLNIGAALNYXVFLSPPGSRIPEGVPXFLILLTAKKIRDYVKKASLYLKMXLFSIGIENA
DVTELQTNYFVAEFAVFVFGISELNTLQQLISEXTQLTRAEIEALAPQLIFSPLGLDTKK
DVVFLIDGSQFAISEFPSICEFIERLVNNMNVGSDATRVAVIQFSDNPKVEFLLNEHSTK
EEVLAAVRRLSPRGGRQVNLGSALEYVSKNIFTRPSGSRIEEGAPQFLILLYSHRSHDDT
ENPVHLIKQIGVAPLPIGKNVDPEELIKIALGPDYIFQVSTYQDLPSLEQKILTPLTTLT
TQQIQKIITDTSRPPDIDSEAKDIIFLVDSSDDVRPDGLAHIRDFIYRIVQQLDIQPSRV
RIAVVQFSNEVFPEFDLKAYLTKESVLQAIRRLRHKGGSPLNVGKALDHVMKTLFIRSAG
SRREDGVSQHLVLLLGGRSQDDISRPSILVQNSGISTLGVGTRQVDSAELQRIISNPKTA
FIVRDFTELPAIEKRVLAAIKTEPEPTELPTDVITVDKKQGDIVFLLDSSINFGRDNFPN
VVEFIHDLIDAIYDEGDSIRVGLVQYNSDVSDEFFLKDFSDKEHILEAVKKIAYKGGRIA
NTGAGVKHIQVKHFVKEAGSRKDQNVPQIAVIVTAGKPEDDGEAAVLGLSQSGVKVFAVG
VKNIDLNEITKLSSDSTTAFRASTPQVLSELNEAVLVTLNDVMREQLCRGVVEVSRDCNL
DVIFGFDVSGTVQGQNIFSVQRMLESIVEDILNRISQMQKISCTPNQAPTVRVAFLAQTP
SGVVEAFDFSEYQPELFEKFQALRNDGPYVFTADTLKSYQDKFKTAPTGSTKVVIHLTDG
IDGAMGPLAAASANLKKEGVKALILVGLERVSNFEEAMKLEFGRGFTYNRPLQVNQLDLD
FEVAEQLDNIAERSCCAVPCKCSGQRGDRGFPGIVGPKGIPGENGYRGYPGDEGGLGERG
PPGINGTQGFQGCPGERGMKGGRGFPGEKGELGENGLDGIDGEEGERGFPGVPGERGSPG
RQGGRGSKGEIGDPGDHGLRGNPGSFGTDSSDRGLKGEKGELGSAGELGRNGPRGDAGGA
GRDGALGRRGPPGIKGNKGALGSLGFNGEQGIKGPQGPPGTTGIPGLQGELGLPGQRGAG
GPVGVVGERGRSGPLGKKGDAGEPGPKGPIGPPGPRGETGDDGRDGVGKEGPKGRTGQPG
FPGYPGPRGVPGDHGDDGKPGPKGSSGERGHSGEPGQRGQKGESGYPGPLGFMGSKGESR
DHCTLVRNIKDKCPCCYGPKECPVYPTELAFALDTAAGGNADTFNRMKDTIVSIVNNITI
AESNCPRGARVALVTYNSEVTTEIRFADSRKKKDLVKRIKDLQFVQTSKQRSLETAMGFV
ARNTFKRARSGFLMRKVAVFFTNGPTKASPKLNEAVLRLYIAGVLPVFLTNREDRVLIDA
LQINNTGGQAFAFTGGASQLAATIRKVFTCHICLDVCDPDPSCGIQRGSFGRDRRAAPTD
VDIDIAFIVDSSESTTPMQFKEIKSYISYIVNQLETSSDPKVSRHHARVAVVQHAPFEFQ
SNSSISPVKVELSLTDYGPRDKLTDFIQNQISQLYGTRAVATAVDYTMRHIFESAPNPRD
HKVIVLMMTGGIEKEELEHLQEVIIEAKCKGYFFVIIGVGRNINIPSIYSLASEPNDVFF
KYADKASELHEEPLLHFGSLLPSFINSENAFYLSPDIRKKCDLFQGDQPIKKNGPKQLNI
PNNVTVTPAVPEKTEVIKHNGDVQITDITENSAKLHWMIPELQKVYVYDIIVTSAHDHSL
VVKLNLTSNERVIGGLQSGQKYHVAITGYHNAQAKATYKGTFNTKSMPAVKGPSAAAAAA
TNVMVNTEPLEVLEKDPCLLDLDMGMQCKEYQVKWFFDYKNKICTQVWYGGCGGNANRFE
TEADCISRCVKPYEKDMQLPVLEKSHLSVTDICQLKKEGGPCSNFVLKWYFDPETASCAR
FWYGNCGGNENRFNTQKDCEKVCVSAHIKSGVVTMIGT
NT seq
8757 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtatcaccatttgatttttgcaacaatctgttgtcttttactctcaggcaat
catgaggctgatgcacagcagaaagaaactacacaagaatctgctgacattattttcctt
attgacggatcaaagaacggcgctgtcactttctcagccattcgtgatttcattgcaaat
ttaattgaaagactctcagttggagctgagctcatacgcattggggtggttatgtttagt
gatgaacccagaactgtattctccttgaacagctacacccaaaaagttgatattctagag
gcagtgaaggcccttagtattcttggtggcgaggaagctaatattggagatgctcttgat
tttgtcatgcaaaaccacttcacccactcaggaggcagcagaatagaggaaggtgtgcca
cagattttagtgctcataagtagcattgagtctagtgatgacataagagaaggagtttta
gccatgaagcaagctagtatattctcattttgcattggggtccaaaatgctgacaatgca
gagcttcagcaaatagctactgatgcaagcttcatatttactgccctggatacacgtaac
cttggtgaacttcaagaactcttactgccaaacattgttggagtggcccaaagactcatt
ttgttagatgccccaactattcttacagaagttgttgaagtcaataagagagacatagtc
ttcctgatagatggttctactgcattgggatccgccccctttaatgcaattcgtgatttc
gtggccaaaatcatcaacagaatggaaattggaccagatctcattcaagttgcagtggca
caatatgcagattctgtaagaccagaattttattttaatagcttccagacgaaaaaagac
attgccaccaatgttaggaaaataaaaccaatgggtggtactacacttaatacaggctcg
gcattgcggtttgttaaagacaacttcttcaccagcgccgctggagccaggattgatgaa
ggtgtccttcccatgttgattctgatcactgggggtgtgtccagagatgatgttgtccaa
ccaacgcaagaaattaaaaagaatggcatcgtggtccttgctgtgggagcccgaaatgct
gaccgtaccgaacttgaaaaaattgcctacgaaccaagcctggttttcacccccacagaa
ttccgcacagttgcactaacagtcatcattcctgatgttttgtcatctataaggtcactc
cctataaaaatttgggaaataccatcaacagaaggtaatttctttgtaaccaaaagagat
atcgtctttcttttggatggatcagtcaacgttggaaataccaacttcccatatgtccgt
gactttcttgtgaacctagttaattcccttgatgttggaattgatgatgtacgaatcggc
ctagtgcaatttagcgagaaccccaaaacagaattctttttaaactccttcctaaccaag
gcagatgtcctttctcgtctgaggcagttgagactgcaaggggggtcaattctgaattca
ggagctgcactagattttgtgcgttccaatcacttcactgaaacaggtgggagcaggaaa
gatgagaatgtccctcaagtgctagtcttccttgcggcagggccatctgctgatgccttc
caagatgccgccaatgccttagctcgtgcgagagtgctcaccttttgtgttggggttagg
aatgccaaactggcagaacttcagcagatcgcatttaatccacaaatagtatattttaag
gatgaattcagctctctgccagctttaccacaggaaatgattagtccactaacaacatat
gttagtggagatgtggaagaaattacgatcacattaacagaaaacaagattgatatttta
tttttgattgatggctcaatgaacgtggctggccagtttcctgctgttcgagagtttgtg
ttccaaattatttctgacctgactgtggggccagatgctgtacgagtatctgtagcacaa
tttagtgacaatgtaaatgtggagttcaactttgatgtcccatccaagatagaaatcctt
cagaaagtaagaaagatgaggatgaaaggaggaaggctactgaacattggagctgcacta
gattatgccataaaagacatctttgtgagacatgctgggagcaggattgaagaaggcgtg
ccacaatttctggttcttcttgtggctgggagatcagatgatattgtggatgaaagtgct
gataccctgaaacaaactggtgtgattacttttgttatccaaaccaaaacctctgatccg
gttgaattagaaaagatagtttatgctcctcagttcattctaaaggctgataccctttct
caaattggagacatacaacccgaaatagtcaatctgttgaaaaccatagaacttaaacct
caagctcagaagaagaatgatgtatttctaatagatggttcagatggctccagaagtggt
tccacataatttaatacttttgaacaaagaattgctgatagtctggaaattggtcctgat
aaagtccaggttgctatgacccagcacagtgatactatcaacttagagttccttctggat
gaatattgtgacaagattgaggtgatcaaggtcatccagagattatttcctatgggctct
tcacttaacataggggcagcccttaattacnncgtgttcctgagcccacctggaagcagg
atacctgaaggtgtcccatagttcttgattctgctgacagctaaaaagataagagattat
gtcaaaaaggcttccttatatctgaagatgngtctttttagcattggcattgaaaatgca
gatgtcactgagttgcagacaaattattttgttgctgaatttgctgtctttgtttttggt
attagtgaactgaatactttacagcaactcatttcagaantcacccaactgaccagagca
gaaatagaagctttggcccctcagctgattttttcaccacttggtctagatacaaagaaa
gacgttgttttccttattgatggctctcagtttgcaatttctgagttcccttcaatttgt
gaatttatcgaacggcttgtaaacaatatgaatgtgggttcagatgctactcgagtagct
gtaattcagttcagtgataatcctaaagttgaatttttactgaatgaacattctaccaag
gaggaggtgctggctgccgtgagaagactaagtcccagaggagggaggcaagtgaacctt
ggttctgccctagaatatgtgtcaaagaatatctttacaaggccttctgggagccgcata
gaggaaggagcacctcagtttttaatccttctttattcccaccgatctcatgatgataca
gagaacccagtacacctgatcaaacagattggtgtggctccgcttcctattggaaagaat
gtggatcctgaggaactgatcaaaatagcacttggtcctgattatatatttcaagtgtca
acttaccaagatctacctagtctggaacagaaaatattaacccctcttacaacattaact
acccagcagatacaaaaaatcattactgatacaagtcgccctccagacattgatagtgaa
gcaaaggacatcatcttccttgttgacagctctgatgatgtcagaccagatggacttgct
cacattcgtgatttcatttaccggattgtccagcaactagatatccaaccaagcagagtg
agaattgctgttgtccagtttagcaatgaagtgtttccagagttcgacttaaaagcctac
ctgaccaaagagagtgtgctacaagccatacggcgcttaagacacaaaggcggttctccc
ctgaatgttgggaaagctctggaccatgtcatgaagactctctttatcagatcagcaggg
agtaggcgagaagacggagtctcccagcatttagtcctcttgcttggagggagatcccag
gatgatatcagcaggccttccattctggtgcagaactctgggattagtactctaggagtt
ggaacaagacaagttgacagtgcggaattgcaaaggatcatcagcaatcccaaaactgca
tttattgtgagagattttactgagctcccagcaatagaaaagcgtgtccttgcagcaatt
aagacagaaccagagccaactgaactgcctactgatgttatcactgttgataaaaaacaa
ggtgatattgtcttcttgctggatagctctattaattttgggagagacaatttccccaat
gttgttgaatttatacatgacttaattgatgctatttatgatgaaggcgattccattcga
gttggcttagtgcaatacaactctgatgtgagtgatgaattctttctgaaggatttctct
gacaaagaacatatcttagaagcagtgaagaagatagcctacaaaggaggcagaattgcc
aatacaggagcaggtgtcaagcatatccaagtaaaacattttgtgaaggaagctggcagc
aggaaagaccagaatgtccctcagattgctgtcattgtaacagcaggaaagccagaagat
gatggagaggcagcagtcttagggctgtctcagtcgggtgtcaaggtctttgcagttggt
gtgaaaaacattgacctgaatgaaattacaaagctctccagtgacagcacaacagccttt
agggcttcaacgccccaggtcctctcagagctcaatgaggctgttctggtgaccctgaat
gatgtcatgagagaacaattatgtcgtggtgtggtggaagtctccagagattgcaatctg
gatgttatatttggatttgatgtctcaggtactgtacaagggcaaaacatattcagtgta
caaagaatgctggaatcaatagtggaagatattctgaacaggatcagtcaaatgcagaaa
attagctgcactcccaatcaggcacccacagtgcgtgtggcattcctggcacagactccc
tctggagttgtagaagcctttgatttctcagagtatcagcctgagttgtttgaaaaattt
caggccttgcgaaatgatggaccatatgtgttcacagcagacactctcaaatcttaccag
gataaatttaaaacagctcctactggaagtacaaaggtggtgatccacttaactgatggt
attgatggtgctatgggaccgctggcagctgcatcagctaatctaaagaaagaaggtgtc
aaggctcttattcttgttggattggagcgagtatctaattttgaagaagcaatgaaactg
gaatttgggcgtggctttacttataataggcctctccaagtgaatcagctggatttagat
tttgaagtggcagagcaattggacaacattgcagaaagatcatgttgtgcagtcccatgc
aaatgttctggacaacggggagacagaggatttccagggatagttggaccaaagggaatt
ccaggggaaaatggctatagaggctatccaggagatgaaggtggactgggtgaacgtgga
ccccctgggataaatggaactcaaggtttccaaggctgcccaggtgaaaggggaatgaag
gggggccgtggattcccaggagaaaagggcgaattaggggagaatgggcttgatggaata
gatggagaagagggagagagaggctttccaggtgttcctggggagagggggagccctggt
agacagggtggcagaggaagcaaaggagaaataggagacccaggtgaccatggacttcga
ggcaatccgggttcttttggaacggatagcagtgacagaggactcaaaggcgaaaaggga
gaacttggatcagcgggagaacttggaagaaacggaccacgaggtgatgcaggaggagct
ggaagagatggagcacttggcagaagaggaccaccagggatcaaaggaaataaaggtgcc
cttggctcactaggatttaatggggaacaaggaattaaaggtccccagggaccacctggc
acaactggaatccctggccttcaaggagagcttggcctccctggtcagaggggtgctggt
ggcccagttggagttgttggggagcgtggtagatctggtcctcttggtaaaaagggtgac
gctggtgagcctggtccaaagggacccattgggcctcctgggcctcgaggagaaacggga
gatgatggacgagatggagttggcaaggaaggccctaaaggcagaacgggacaacccggt
ttcccaggatacccaggaccacggggtgtacctggagatcatggtgatgatggtaaacct
ggccccaaaggaagcagcggtgaacggggacattcaggggaacctggccaaagaggtcag
aaaggagagagtggatatccaggaccacttggatttatgggtagcaaaggagagtctaga
gatcactgcacacttgtacgcaacatcaaagataaatgtccttgctgttatggcccaaag
gaatgtcctgtttatccaactgaattggcctttgctcttgatactgccgctggtggaaat
gcagacactttcaacagaatgaaggacacaatagtgtcaattgttaacaatatcacaatt
gcagaaagcaactgccccagaggtgcccgagtagcactggttacatacaacagtgaagtt
accactgagatacgttttgctgactccagaaagaagaaggatttagtaaaacgaattaag
gatctccaatttgttcagacatccaagcaacgtagcttagaaacagccatgggatttgtg
gccaggaatactttcaagcgtgcacgtagtggcttccttatgaggaaggtggctgtgttc
ttcaccaatgggccaacaaaagcatctccaaagttgaatgaagcagtactaagactgtac
attgctggagttctgcctgtattccttacaaacagagaggacagggtccttatcgacgca
ttacagataaacaacactggtggacaggctttcgcatttactggtggcgctagtcaactg
gctgcaactattaggaaagtgttcacatgccatatttgtctagatgtatgtgatcctgat
cccagctgtggtatccagaggggtagctttggcagagacagacgggcagctcctacagat
gttgacattgatatagcattcatcgtggatagttctgagagtaccactccaatgcagttc
aaagaaattaaaagctacatttcctatatagtaaaccaactggaaactagttctgatccc
aaggtatctcgacatcatgccagggtcgctgttgtccaacatgctccctttgagtttcaa
tccaactcaagcatatctcctgtcaaagttgaattgtcactcacagattatggacctagg
gacaaattaacggatttcattcagaaccaaatttcacaactttatggaacacgggctgtg
gcaacagcagtagactatacaatgaggcatatttttgaaagtgcaccaaatcccagagat
cacaaagtcattgttttgatgatgacaggaggcattgaaaaggaagaacttgaacacctt
caggaagttattatagaagctaaatgtaaaggatatttttttgtcattattggcgttggt
aggaatattaatattccaagtatctacagcttggcaagtgagcctaatgatgtcttcttc
aaatatgctgataaggcatcagaacttcatgaagaaccattgctacattttggaagcctc
ttaccatccttcatcaacagtgaaaatgccttttacttgtctccagatatcaggaaaaaa
tgtgatttgttccagggtgaccagccaataaaaaaaaatggcccaaaacaactaaatatt
ccaaataatgttactgtcacacctgctgtaccagaaaaaacagaagtgattaaacataat
ggagacgtccagataactgatatcactgaaaatagtgctaagctgcattggatgattcct
gagcttcagaaagtctatgtctatgacatcatagtcacctcagcacatgaccactcttta
gttgtgaagcttaatttaactagcaatgaaagagtcattggaggtcttcagagtggacaa
aagtatcatgttgctatcacaggctaccataatgcccaggccaaagctacttataaggga
acatttaatacaaagagcatgcccgcagtcaagggcccttcagcagcagcagcagcagca
accaatgtaatggtgaacactgaacctttggaagtccttgaaaaagatccttgcttactg
gaccttgacatgggcatgcagtgcaaggagtatcaggttaagtggttctttgactacaaa
aacaagatctgcacccaggtttggtatggtgggtgtggcggtaatgccaatagatttgag
acagaagctgactgcattagcagatgtgtgaagccatatgagaaagatatgcagcttcct
gtccttgagaaaagtcatttgtcagtcacagatatctgccagttgaagaaagaaggtggt
ccttgcagtaattttgttctaaaatggtattttgatccagagaccgcaagttgtgctaga
ttttggtatggtaactgtggtggaaatgaaaatagatttaacacacagaaagactgtgaa
aaagtctgtgtttcagctcacatcaagtctggtgttgtgacaatgattggaacttaa
DBGET
integrated database retrieval system
