Protobothrops mucrosquamatus (Taiwan habu): 107291874
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Entry
107291874 CDS
T05763
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmur03009
]
107291874 (UTP20)
Ribosome biogenesis [BR:
pmur03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107291874 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_N
Arm
DUF7051
Motif
Other DBs
NCBI-GeneID:
107291874
NCBI-ProteinID:
XP_015676399
LinkDB
All DBs
Position
Unknown
AA seq
2789 aa
AA seq
DB search
MKTKSSAHKAENTHRFLTFSERLSNVNIDIIHRIDRTGSYAEEVETYFHEGLEKWRELNL
TRHFVTFYRQVVNKCQSFNQLVYYQNDIVKSLKTHLQVKNSLAFQPLLDLVVQLARDLQT
DFYPHFQDFFLCITSLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDMTNIYGLYSTLLAH
RKQHIRNFAAESFTFLMRKISDKNALLNLMFLDLGEHPEKVEGVGQLIFEMCKGVRNMFH
SCAEKAILLILKKMGPVTETEVILPWVSIGEVCKHMAQSASRFIYREHFDIFFKCLQETV
FTLQEKVTKDNFCEASEQMERLLQVYLIIVEYAHGSKISQPEEVCKTLIKIIDTSDLTVP
CCDSLLKVISVLLLHENVLLSDSLVKETVEKVFRSGFEWYSVLNFSKAMFLMKQFEKQFL
PSLLGYTGYCIYSDDALIQEVALAVLSRLILKKAEPPSVGSMAYEKYPLVFEESAKGLNR
RYLRSKKMEEKEEETVLDHILSCIRFPTSRNTADLSQSWAALVVLPHIRPLVKEKVTPVL
TRFSESLFAALDKGQFCKGNLFVTCQAVSTLLSLVESLEILDMLPVERIKTLLMTFPSEP
SALLLADLYFTRLALCGYHKHLSKETLTELFSKLQFNISSSAPKVRLLTIRILSRFDNLL
STGAQDVGLFGMLLQAELVPANINDYREKLLYLSKLRYDLVCSMIPEGALQEVSLRYLLG
MLYINFSPLWEPVIELIRSHADEMENKLFWKVYHEHLEKAVSYAEKELHNELEEEPKTVA
DVGSEEIYQHHVRALYDEQLKCQTCCNERMDHTNFRFLLWKAMSRFAYRVESRSRELSPL
LLRFINNEYYPADIQIAPVQDLRKKTSCSEDIKNQAEKMDLRDTTEDESYDFEEEKQTSE
GQMTEEMPRRKTRRAATKQLISHLQVFTQFSNPRALYLEPKLNKIYVQLLTHQDQNVQKV
ALDCIMTYKHPHLLPYKENLYRLLEDKSFKEEIVHFSISEENSIVKPQHRPELIPVLMRI
LYGRMKNKTGSKTQGKSAAGTRMAIVLRFLAGSLSEEIRVFLDLLFEPVRHFNNGHCHSA
VLQAMQDLDLSQVLPLGRQHSLFNSLEVVLKNLGHLISQNLPEILQILLCMTATVSHILQ
QREKIQLRFINQLKNLRRLGLKLIADFFSDFEMYGFSEEEIDAVFCAVVWPQITRLASES
QYSPTPLLKIIHIWSKNPRYFILLAKQKPGHPEYDILLNVSAVLSAKILGEGTAGIVMDV
IDSLLNIPDFEPNDQFSSLTVTDCIFTEVEEIAGDVPSMGTRLILPHVPSVLQYLNKTMI
SVDRIKKKKYNAQLSKELNILSKISKFIKDKNQSSILIGLLLPFLQQSTITQDTEIDILE
TVQNLLKHCLTPASFLKPLAKLFSVIQNKLSRQALCVVFETLSHLESNIKYITDTVKLNA
FSLQHLDEINFDVRLSAFQDIVSHIKGMNKIDVNYLIPVMHNCFYTIQLEEMALSDNAIL
CLNAIIQRFSELEHTEDEFKEIIQHTLLDSLRKGLKSKIECIQQDYTSLLSSLIRAFSEH
PEFHDLVQLTDYHDPEMDFFENMKHIQIHRRARALMKLAKQLVEGKTILSSKTLQNYIMP
YATSTIFNEKMLKYENMITASVEMVGAVCRHLSWSAYLYHLKHFIHILQTGQINQKLGVN
VLVMVLEAFHFDHETLEKQLSIIEKEDAVDINPEVENEAMEVELSDGEEESQTTSKEQSC
VYEQKVYAEPRSDQPANEEDENFQKVRKAPSFLPRNKEELECLIKHIQETVTGNILPKLH
RCLIAKVKRDEQHKMVKSKIINDEEVVQVPIAFAMVKLMQSLPQDVMEENLPGILLKVCS
LLRNRAQEIRDVARNTLMKIIEALGSQYLQYVLKEMVSILVTGYQVHVLTFTVHLLLKSL
ANDRLKVGDLDPCIELLMEIFHRELFGEIAEEKEVKGIVSKVMEARRIKSYDSYEILAKY
VGKNQVIKFILPLKEILENTTSLKMSRKVHETLRRIVSGLIVNKEMTAETVLLLSHGLIS
ENLPLLTEKAKMKAAVPPDPRLRPKSCLLLPPTPIRGGQKAPVSSKTNMHVLVESGLRLL
HMSLKRSKINSSDEHVLEMMDPFVQLLISCLQSTDIKVITGALQSFLWVLKFPLPAIDNN
VEQLTTQLFLLLKEFAKPGAAKGQNFHLVVNCFKCVTLLVRNTKSQITDKQLQVLLGYAE
EDIYDSLRQTTAFGLLKAILFRKLIVPEIEGVMQKVADFAITGQSEQVRIQCRQIFLKYI
IDYPLGKKLKPNLECILAQLTYEYETGRESALEMIAYIFEMFPQGLLHEFCGLFFVPLCM
MIVNDDSAKCKRMAALAIKNLLSKISPENRDLMFSLVASWFTSKKSVHKRLAAHASGAFV
EAEKIEFEKRLGTILPVIEREIHPSNFEEVKEENEEKQADRLLFSFLTLLIKLINECNII
QLNKHHEILINIWGHVQSHLWYPHSWVWLTSAQIFGLLFASHKPEELVNKWCKRKTEKKQ
VTHEPSATIFLIEELSEKMKTFALAFCHQLKSRFLSYNLGEQVIKNLLFVSKVLYLLAPT
PEDGKEIGENVVWEIEDQGDLGSEDEKEISGMEAKEKSSPASLLWVMKKLLVMATREAAY
SPKDSLKRTCIFKFLGAIAVDLGKENVKPYLPTIIAPLYRELSSTYAEQDPTLKNLSQEI
IELLKKLVGLEDFSISFAFVQKQASQKRAQRKKQRALQAVANPEIAAKRKLKRHKNKIEA
KKRKIEYLRPGYKAKKQRSHALKDLAMVE
NT seq
8370 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaaatcgtcagctcataaggctgagaacacgcatcggtttctcactttttca
gaacgtttaagcaatgtaaacattgacattatacaccgcattgataggacaggaagctat
gctgaggaggttgagacctattttcatgaaggacttgagaaatggagagagctgaatctg
acacggcattttgtgacattctacagacaggtagtcaacaaatgccagtctttcaaccag
ttagtatactatcagaatgacattgtaaaaagcttgaaaacccacctgcaagtgaaaaac
agccttgcatttcaaccccttttggatttggtggtacagctggcccgtgatcttcagaca
gatttttatccacattttcaagatttttttctctgcattacaagtctgttagatactcag
gacacagagttgttagaatgggcttttacatcactttcctacctttacaaatatttatgg
agactaatggtgaaggacatgaccaacatttatggattgtacagtacccttctggctcat
cgcaaacagcacatcagaaactttgcagcagaaagcttcaccttcctgatgaggaagatt
tctgacaaaaatgctcttttaaaccttatgttccttgatctgggagagcatccagagaaa
gtggaaggtgtgggacaattaatttttgagatgtgcaaaggggttagaaacatgttccat
tcctgtgcagaaaaggccatactgttaattttgaagaagatgggaccagttacagaaaca
gaggttatactcccctgggtttccattggagaagtttgcaaacatatggcacaatcagct
tctagattcatctatagggaacattttgatatctttttcaaatgcttgcaggaaacagtg
tttacattgcaagaaaaggtaaccaaggacaacttttgtgaagcttctgaacaaatggaa
agattattgcaagtctacttaatcatagtagagtatgcacatggctcaaaaatttcacag
cctgaagaagtttgtaagacattaataaaaataatagatacatctgatctcacagtgcct
tgttgtgattccctgcttaaagttatttctgttttgcttcttcatgagaatgtcttattg
tctgattctttggtgaaagaaactgttgaaaaggtcttcagaagtggatttgaatggtat
tctgttttgaatttttctaaagcgatgtttctgatgaaacaatttgaaaagcaatttctt
cccagcctccttggatacactgggtactgtatctacagcgatgatgctttgatccaggaa
gtggccttagcagttctctctagacttatcctaaagaaagcagaacctccctctgttgga
tcaatggcctatgagaagtatccacttgtttttgaagaatcagctaaaggattgaataga
agatatttgagaagtaagaagatggaggaaaaagaagaggagacagtgcttgatcatatt
ctgtcttgcatcagattccccaccagcagaaacacagctgacctttcacaatcctgggca
gcccttgtagtacttccacatataaggccactagtgaaagaaaaagtcacaccagtgctt
acaaggttctctgagagtctctttgctgcccttgacaaaggacagttctgcaaaggaaac
ttgtttgtgacttgtcaagctgtgagcacgcttcttagtttagtggaatccttggaaatt
ttagatatgttaccagtggaacgcataaagactttattgatgacatttccttcagaacca
tctgccttactattggctgatctgtattttacaagattagcattgtgtggttatcataaa
cacttatctaaagagactctgacggaattattttctaaattgcaattcaatatttcttcc
agtgcacctaaagtgcgactgctaactatacggattttaagtcgttttgataacctgctt
tcaacaggagctcaggatgtggggttatttggtatgttgcttcaagccgaacttgtgcca
gcaaatatcaatgattatcgtgagaagctgctctacctgagtaagctgagatatgatttg
gtgtgttccatgatccccgagggagctttgcaggaggtgtctcttcggtatttactggga
atgctttatatcaacttcagtccactatgggaacctgtgattgagcttataagatcccat
gcagatgaaatggaaaacaagctattctggaaagtttatcatgaacatttggaaaaagct
gtatcctatgctgaaaaagagctacataatgagctagaagaagaaccaaaaacagttgcg
gatgttggaagtgaggaaatctatcagcatcatgtcagagctttgtatgatgagcaattg
aaatgtcagacatgctgtaatgagagaatggatcacacaaactttaggtttctcctttgg
aaggcaatgtcaagatttgcatacagggtggaatccaggtcaagagaactttctccactt
ctactaagatttattaacaatgagtattatcctgctgatatacaaatagccccagtgcaa
gatcttagaaaaaaaaccagttgtagtgaggatataaaaaatcaggcagagaagatggat
cttcgagatacaaccgaggatgagtcatatgactttgaagaagagaagcaaacttctgaa
ggccaaatgactgaagagatgcccagaaggaaaaccagaagagctgcaacaaagcagctt
atcagtcacttacaagttttcactcagttttcaaatccccgtgctttgtatttagaaccc
aaattgaataaaatatatgttcagctgctgacccatcaagaccaaaatgtgcaaaaagta
gctcttgactgtatcatgacttacaagcatccacatcttctgccctataaagaaaattta
tatcggctattggaagacaagagttttaaagaagaaatagttcatttcagcatttctgaa
gaaaacagtatagtaaaaccacagcaccgaccagaacttattcctgttttgatgaggatt
ctgtatggacggatgaaaaacaaaactggaagcaaaacacaagggaaatcggcagcaggg
acccgtatggctattgttttgagattcctggcaggctctttgtctgaagagataagggtg
tttttggatctgctctttgagcctgtgagacatttcaataatggacattgccactctgct
gtgcttcaagctatgcaagatttggatttatctcaggtcctaccgttaggccgtcagcat
agccttttcaacagtttggaagtagtactaaaaaacctgggacatctaatcagccagaac
ctgcctgagattttacagattttactttgcatgacagcaacagtatcccacattcttcag
caaagagaaaagattcaactcagatttatcaaccagctgaaaaacttaaggcgccttgga
cttaagcttatcgcagactttttctctgactttgaaatgtacggcttcagtgaagaagag
attgatgctgtgttctgtgcagtggtgtggccccagatcactaggctggcttctgagagc
caatattctcctactcctttactcaaaattattcacatctggagcaaaaaccccaggtat
ttcattttgctggctaagcagaagccagggcatccagaatatgatatattattaaatgta
tctgccgtgctctcagccaagattctgggagagggaacagctggtattgtgatggatgtg
attgacagccttcttaatattcctgactttgaacctaatgaccagtttagcagcttgaca
gtgactgactgcatctttactgaagttgaagaaatagcaggagatgttcctagtatgggg
acgaggctgattctcccccatgtcccttcagttcttcagtatctcaacaaaactatgatc
agcgtagataggataaagaaaaaaaaatataacgcacaactcagcaaagaactcaacatt
ctttcaaagattagcaagtttataaaggataagaaccagagttctattctgattggcctc
ctgctccccttccttcaacagagcaccattactcaggatacagagattgacattctggag
acagtacaaaatctactgaaacattgcttaactccagcaagcttccttaaacctctggca
aaactgttttctgttattcagaacaagttgtctcgtcaggcactctgtgtggtttttgag
acattatcacatttggaaagtaatataaaatatatcacagatactgtcaagctaaatgct
ttcagtctgcagcatcttgatgagatcaactttgacgtccgtttgtcagcattccaagac
atcgtttctcatatcaaagggatgaacaaaatagatgtcaactacctcatcccggtaatg
cataactgtttctacactatacagctagaggaaatggctttaagtgacaatgcaatcctc
tgcctgaatgccattattcaaagattttctgaacttgagcatacagaggatgaattcaag
gaaattatccagcacacacttctggattctttgagaaaagggctaaagagcaagattgag
tgcattcagcaagattacacatcattgctatcaagcttgattcgtgcattttcagagcat
ccagagtttcatgacttggtccagctgactgattatcatgatccagagatggacttcttt
gaaaatatgaagcatattcagattcacagaagggcacgagctctgatgaaactagctaag
cagttagtggaaggcaaaaccatactgagttctaaaactcttcaaaattatattatgcct
tatgcaaccagtaccattttcaatgagaaaatgcttaagtatgaaaacatgataactgca
tcagttgagatggtgggagctgtctgcagacatctttcttggtcagcttacctctaccat
ttgaaacatttcatccacatattgcagactggacagatcaatcagaaacttggtgtcaat
gtgctagtaatggtgctggaggcttttcattttgaccatgaaactcttgaaaagcaactt
tcaattattgaaaaggaagacgctgtggatatcaatcctgaagtagagaatgaagccatg
gaggtggaacttagtgatggagaagaagaaagccaaacgaccagcaaagaacagtcttgt
gtttatgaacagaaagtgtatgctgaacctaggtctgatcagcctgctaatgaagaagat
gagaatttccagaaagttagaaaagcaccttcattcctgcccaggaataaggaagagttg
gagtgtctgattaaacatattcaggaaacagtgactggcaatatattgcccaaattgcac
agatgtctcattgcaaaggtgaaaagagatgaacagcacaagatggtgaaatccaagatt
atcaatgatgaagaggtggtgcaagtgccaatagcttttgcaatggtcaagctaatgcag
tctcttcctcaggatgttatggaggagaatttgccaggcattcttctgaaagtctgctct
cttctgaggaatagagcacaggaaatccgggacgttgcacgtaacaccttgatgaaaata
atagaggctttggggtcacaatacttgcaatatgtcttaaaagagatggtgtcaatcctt
gtcactggttaccaggtccatgtgttaactttcactgtccacctcttgctgaagagtctt
gccaacgatcgacttaaagttggtgatttggatccatgcatagaactgttgatggaaatt
ttccaccgtgaattgtttggggaaatagctgaagaaaaagaagtaaaaggcatcgtttcc
aaagttatggaagctcgtagaatcaaaagttatgattcttatgaaatccttgccaaatat
gtaggaaaaaaccaagtgattaagtttattcttccattgaaagagattttggagaataca
accagcctaaaaatgtctcgaaaggtgcatgaaactttacgacgaattgtgtctggattg
atagtgaataaggaaatgactgcagaaactgttcttctactcagccatggtttgattagt
gaaaatctaccattgctaacagaaaaagcaaaaatgaaagctgcagttcctccagatcct
cgtttgcgaccaaagagctgccttctactaccaccaacccctattcgaggaggtcaaaaa
gcacctgtgagcagtaagactaacatgcacgtcttggttgagtcagggctacggctgctg
cacatgagtttgaagagatctaaaataaattcttcagatgagcatgttttagaaatgatg
gatccatttgtacaattgcttatcagctgtcttcagtccacagatattaaggtgattact
ggtgctcttcaatcatttctctgggttttaaagtttcctctgcctgctatagataataat
gtggaacagttaacaacacagcttttcctcctattgaaggagtttgctaaaccaggtgca
gctaaaggacagaattttcatttagttgtcaattgtttcaaatgtgtaactctgctggtg
aggaatacaaagagtcagattacagataaacaattgcaagttttgcttggatatgctgaa
gaagatatttatgactcgttacgacaaaccacagcttttggcctcttaaaggctatttta
tttagaaaattaatagttccagaaatcgaaggtgtcatgcagaaggttgcagattttgcc
attacaggccaaagcgagcaagttcgaattcaatgtagacagatttttctgaaatacata
attgactatccccttgggaaaaagttgaaacccaaccttgaatgtatccttgcccagctt
acttatgaatatgagacgggaagagagtctgctttggaaatgattgcttacatttttgaa
atgttccctcagggcttattgcatgagttttgtggcctattctttgtcccattatgtatg
atgatagtaaatgatgattcagcaaagtgcaagaggatggcagcactggcaatcaaaaat
cttctcagcaaaattagtcctgagaaccgagacctgatgttttccctggttgcttcatgg
tttacaagtaaaaagagtgtacataagagattagctgctcatgcctctggagcatttgtt
gaagctgaaaaaattgaatttgagaaaagacttggaaccattctccctgttatcgagaga
gaaattcatccttcaaattttgaagaagttaaagaagagaatgaagaaaagcaggcagac
agattgctcttcagcttcctaactttgcttattaaactaatcaatgagtgcaacattatt
caattaaacaaacaccatgagattctgatcaacatttggggtcatgtccagtcccattta
tggtacccacacagctgggtttggctgacttctgctcagatttttggcctgctatttgct
tctcacaagccagaagaacttgttaataaatggtgcaaaagaaaaacagaaaagaaacaa
gtgacacatgagccatcagcaacaattttcttaatagaggaacttagtgaaaagatgaaa
acatttgctttagctttctgccatcagctgaaatccagatttctcagttacaatcttgga
gaacaggttataaagaatttactgtttgtatccaaagtactgtatcttctggctcctact
ccagaagatggcaaagagattggtgagaatgtggtctgggaaattgaagatcagggtgac
ttaggaagcgaagatgagaaagagatttcgggtatggaagcaaaagaaaagagcagtcca
gccagtttgttgtgggtgatgaagaaactcctagtcatggcaacaagagaagctgcttat
tcacccaaagactctttaaagagaacctgcatctttaagtttcttggtgctattgcagtt
gaccttggcaaagagaatgtaaaaccgtatcttccaactatcatagcccctctatataga
gaactgagtagcacgtatgcagaacaagatccaaccctaaagaatctttcccaagaaatc
atagaactactgaagaaattagttggattggaagacttttcaatttcatttgcttttgtg
caaaaacaagccagtcagaagagagctcaacgaaagaagcagagagccctacaggctgtt
gctaatcctgagattgctgccaagaggaagttaaaaaggcataagaacaaaattgaagca
aagaagagaaaaatagaatatctacggcctggttacaaagccaaaaaacaaagaagccat
gcattaaaggacttggcaatggttgagtaa
DBGET
integrated database retrieval system
