Protobothrops mucrosquamatus (Taiwan habu): 107292145
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Entry
107292145 CDS
T05763
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107292145 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmur03000
]
107292145 (ARID1B)
03021 Transcription machinery [BR:
pmur03021
]
107292145 (ARID1B)
03036 Chromosome and associated proteins [BR:
pmur03036
]
107292145 (ARID1B)
Transcription factors [BR:
pmur03000
]
Eukaryotic type
Helix-turn-helix
ARID
107292145 (ARID1B)
Transcription machinery [BR:
pmur03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107292145 (ARID1B)
Chromosome and associated proteins [BR:
pmur03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107292145 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
107292145
NCBI-ProteinID:
XP_029140930
LinkDB
All DBs
Position
Unknown
AA seq
2452 aa
AA seq
DB search
MAAQVAAAPMSASKSKVKTQSLTGNLNQDLNSGVPAAGTVGAAGSGSLLGVVDGTSSRLN
NVDYHLLHQDNEVNMASNATSAAAAAAAPNNATSSGRSSSSELVLKDPGSASGLSSSSFP
MATGLLPNHKLQSVGGDPSTAAPSHHPRAQHQHPAHLRAQHPHVRHYHHHHHHHALQHQQ
LNQFQPQPPPQHHPMQNNNNGGGGGGSSSNNNGGGAAQPSSADMEQQQQQQQQQHGGKDR
GLGGQAEPQNQPQSQPLLNQGGDEEEATPPPDKMGEQHLNSRYDHPSLGPLGGQQPPPPP
PPPLPPPPPPQGAGGGGTGGGDGRGGGPSAVGVSEFNSYYGNAGSGSSGGASSASRAGPC
FDQHGGQQSPGMGLMHPAAAPNIMDPLPNSHEGYANSQYNHYSGAYGRPGGGTNATAGAV
AAAAAAGGGGGGGGGGVYGGSSSAFGVLSSPRQHQQGMMLGPGGGGSLGKVSGAAGFQRF
SGQNQHPSGATPTLNQLLTSPSPMMRSYGTGYPEYSSPSVAPSQQPAQGAAAAAAPGSQQ
AVMGKDMGSQYGAANPVWAAAQQRNHPAMSPGSTGQTLSRSQGNPMDPMVMKRPQLFAVG
NNPHAQSQPGSPFPGQSYGPPGPQRFPMGMQSRTPASMGGMQYPQQQMPSQYGPQGVTGY
CQQPYYNQQPQPQHLPPQAQYLSQAQQRYQTQQEMSQEGYGTRSQPPVTQNKPNHEELTL
IQQERPSSLPVEVLASEDASFGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNP
AQSPFSPHASPHLSSIPGGPSPSPVGSPAGSNQSRSGPISPASIPGSQMPSQTPGTQSES
SSHPALSQSPMPQDRGFMTGIQRNPQLSQYASQQTGPSMSPHPSPGGQMHSGIGSFPQSN
SSGTYGTQMSQYGPQGNYSRQPTYSGVTNASYSGPGPGLGINISNQMHGQGPGQPCGTIP
LGRMPSTGMQSRPFPGNMSSMTPSSPGMTQQGGPGMGPPMPTVNRKAQEAAAAVMQAAAN
SAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGNAQSPMMHQPDQYGQGSFPVINQSGI
MGSSSPYTQPMNSNSSLMNPQVPPYSLAPNMVNSSTAPMGLADLMTQGESKLPVPLKPDG
KEEGPSQTESKKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSIGSPGWPK
TPSSPKSSSSNTTGEKITKMYELGTEPERKVWVDRYLTFMEERGTPVAGLPAVGKKPLDL
FRLYVCVKEIGGLAQVNKNKKWRELSTNLNVGTSSSAASSLKKQYIQYLFAFECKIERGE
EPPPEVFSTGDTKKQAKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPSDLKPPTPASTPH
GQMTPTQSSRNSSVSVHDPFSDISDSTYPKRNSMTPNAPYQQSMNMPDMMGRMPFEPNKD
PFGGMRKVPGNSETFMAPGQMPNSGMQDIYSQSPAGTMSNMGIGQRQQFPYGSGYDRRSD
HGLGPEGSMGAPGQSNMVPSNSDPSMYSPNCYPGQQRHEPYGPQYPMQAPPSGQPPYGGH
QSGMFPQQQNYKRHMDGIYGPPAKRHDGDMFNMQYSNQQQELFNQYSSAYSGPDRRPIQG
QYPYPYNRERIQGPGQMQQHGIPPQMIAGPMQSSASSESPQQNIWPTRNDMSYPYQNRQG
PGVPAQAPPYPGMNRTDDIMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSS
YQTPPSMPNHISRAPSPASFPRSHENRMSPSKSPFLSSMKMPKVMPTLPVSQVTGPPTQP
PPSLRREVTFPPGSVEASQPVLKPRRKITSKDIVSPEAWRVMMSLKSGLLAESTWALDTI
NILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGHPGSKLQDHNSSLN
EDGQSATEDVRKEEENDECIDYFYDLEDEEEEEEEEENENTEEGKSTLVPPPGAILDPSE
RPKQASKFDKLPIKIVKKNNLFVVDRSDRLGHVQEFNSGLLHWQLGGGDTTEHIQTHFES
KMEIPPCRRPSLSVSSGKKKNVEGKGESEEQQDKSISATIDDVLSARPGALSEDPDSNSQ
SDSSKFPFGIHQVKSHRNIKLLEDEPRSRDETPLCTIIHWQDSLAKRCICVSNIVRSLSF
VPGNDVEMSKHPGLVLILGKLILLHHEHPERKRTPQTYEKEEEVDKGVACSKDEWWWDCL
EVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSILS
PQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSN
LARGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHVQPPPLEPPSVDMMCR
AAKALLAMARVEENRSEFLLHEGRLLDISISAVLNSMVASVICDVLFQIGQL
NT seq
7359 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaagtagcagcggctccgatgagtgcgagcaagagcaaggtcaaaacccag
agtttgacgggtaacttaaaccaggatcttaactctggggttcccgcggctggcaccgtc
ggagctgctggatctggctccctcctgggggtcgtagatgggacgagcagcagattgaat
aatgtagattaccatcttctccaccaagataatgaagtgaacatggccagtaatgcaact
tctgccgccgccgccgccgcggctcctaacaacgcgaccagcagcggccgcagctcttcc
tcggaactggttctgaaagaccctggaagcgcgtcgggcttatcttcctcttcttttcct
atggcgacagggctgcttcccaatcataagttgcaaagcgttggaggcgatccctctacc
gccgcaccttcacaccacccccgtgcccagcaccagcacccagctcacctccgtgcccag
cacccccacgttcgccactaccaccaccaccaccaccaccatgcacttcaacaccaacag
ctaaatcaattccagccacagccgccgcctcagcaccatccgatgcagaataacaacaac
ggcggcggcggcggcggcagcagcagcaacaacaacggcggcggcgctgctcagcccagc
agcgcagacatggaacagcagcagcagcagcagcagcagcaacatggaggaaaagaccgt
ggcttggggggacaggccgagccccagaaccagccgcagtcccagcccctgctgaatcaa
ggcggggacgaggaagaggcgacgccgccgccggacaaaatgggcgagcagcacctcaac
agtcgctacgaccaccctagtttgggacctttgggcgggcagcagccgccgccgccgccg
cctccaccgctaccaccaccgccaccacctcagggagcgggcggcggcggcactggagga
ggagacggccgcggcggcggcccctcagcggtgggtgtctcggagtttaatagctattac
ggcaacgctggcagcggcagcagcggcggcgcctcctcagcgagccgggccgggccttgc
tttgatcaacatggcggacaacaaagccccgggatggggctaatgcaccccgcggcggcc
cccaacatcatggaccccctgcccaactcgcacgaaggctacgccaacagccagtacaac
cactactcgggcgcttacggccggcctggcggcggcactaacgcaacagcaggagccgtg
gcggcggcggcggctgcaggaggaggaggaggaggcggcggcggcggcgtctatgggggc
tcgtcctctgctttcggggtgctgagttcccccaggcagcaccagcagggcatgatgctg
ggccctggcggcggcgggagcctggggaaggtatctggggctgcgggcttccaaagattc
tccgggcaaaaccaacacccgtctggagccaccccaaccttgaaccagctgctgacttcc
cccagccccatgatgaggagctatggcacaggctaccccgaatatagtagtcccagcgtt
gccccatcgcagcagccggctcagggagcagccgccgcagccgccccaggaagtcagcag
gcagtcatgggcaaggatatgggctcccagtatggagctgcaaacccagtctgggcagct
gcacaacaaagaaatcaccctgctatgagccctggaagcactggacagaccctcagcagg
agccagggcaacccaatggatccaatggtaatgaaaagacctcagttgtttgcagttggc
aacaacccccatgcccagtcccagcccggcagtccatttccagggcagtcatatggacca
ccaggaccccagcgtttcccaatgggaatgcagagccgaactcctgcttccatgggagga
atgcaatatccacagcaacagatgccatctcagtatggtccacaaggtgtaactggttac
tgccaacagccatattacaaccagcaaccacaacctcagcatctgcctcctcaggcccag
tacctctcccaggcccagcaaaggtaccagacgcagcaggaaatgtctcaggaaggctat
ggaaccaggtctcaaccccctgtcacccagaacaaacctaaccatgaagaactgacccta
atccaacaagagaggccttcaagtttaccagttgaagtcttagcctcggaggatgcttca
tttggactcaaggatttatcaggctccattgatgacctgcctactggaactgaagcaaca
ttgagttcagctgttagcgcatcaggttctactagcagtcaaggggagcagagcaaccca
gcacagtcacctttctcccctcatgcctctccacatctgtccagcatccctgggggccca
tccccttcccctgtgggctctccagccggaagcaatcagtcaaggtctggtcccatttct
cctgcaagtattccaggtagccagatgccatcacagactcctggtacccaatcagaatct
agctcccatcctgccttgagccaatctccaatgccacaggatcgaggttttatgacaggc
attcaaagaaaccctcagttgtcacaatatgcatctcagcagactggaccttctatgtca
ccccatccttcacctggaggtcaaatgcattctggaatcgggagctttccacaaagtaat
tcaagtggtacttatggaactcagatgagccagtatggaccacaagggaactactccaga
cagccaacatactctggagtgaccaacgcaagttacagtggcccaggacctggtttgggt
ataaacatcagcaaccaaatgcacggacagggtccaggccagccttgtggtaccattccc
ttgggacgaatgccatcaactgggatgcaaagcagaccgtttcctggaaatatgagcagt
atgactcccagttctccaggcatgactcagcaaggaggccccgggatgggaccacccatg
ccaactgtgaatcgtaaggcccaggaggcagctgcagcagtgatgcaagctgctgccaac
tccgcccagagcaggccaccatacattcggtcgcctgcttatcccagccagtctggggct
ggcggacgccccatgttttcttcacagcatcccaactatggcaacgctcagtctcccatg
atgcatcagcctgaccagtacgggcaaggcagttttcctgtcatcaatcagagtggcatt
atgggatccagttctccttacacccaaccaatgaacagcaactcaagcctgatgaaccct
caagtacctccttacagcctggcacctaacatggtgaacagttccacagcacctatgggt
cttgcagacttgatgactcaaggcgagtccaaattgcctgttcctctcaaaccagatgga
aaagaagaaggaccttcccagactgagagcaaaaaggatagctacagctctcagggtatt
tctcagcccccaaccccaggcaacctgccagtcccttccccaatgtccccaagttctgct
agcatctcctcatttcatggagatgaaagtgatagcattggcagcccaggctggccaaag
actccatcaagccctaaatcaagttcctccaacacaactggggagaagatcaccaaaatg
tatgagctgggaactgagccagagcggaaagtttgggtggatcgctatctcaccttcatg
gaagaaaggggaacacctgtagctggtctccctgctgttggcaagaaaccgctggatctt
tttagactctatgtttgtgtaaaggagattggaggcttagcccaggttaataaaaataag
aagtggcgtgagctgtctaccaacctaaacgttggcacttcgagcagtgcagccagctcc
ttgaaaaaacaatatattcaatacctctttgcctttgaatgcaagattgaacgaggggag
gaaccccctccagaagtcttcagcaccggagatactaagaaacaagctaagattcagccg
ccatctcctgctaactcgggttctcttcagggtccacagaccccccagtctacggggagc
aattccatgacagaagtgccaagtgacctcaagcctccaacaccagcgtccacgcctcac
ggacagatgacacctacacagagcagcagaaatagttcagtcagtgtacatgatcccttt
tcggatataagtgattccacatacccaaaacggaactccatgactccaaatgcaccctat
cagcaatcaatgaatatgccagatatgatgggaaggatgccctttgagccaaacaaggat
ccttttggtgggatgagaaaagtgcctggaaatagtgaaaccttcatggcccctggacaa
atgcccaacagtggcatgcaggatatatacagccagagtcccgctggaaccatgtccaac
atgggcataggccaacgccaacagtttccctatggaagtggttatgatcggaggtcggat
catgggctgggtcctgaaggcagtatgggagcacctggtcaaagcaacatggtgccttca
aacagtgacccaagcatgtactctcctaactgttatcctgggcaacaaaggcatgaacca
tatggaccgcagtatccaatgcaagctcctccttctggacagcccccctatggaggacac
caatcaggaatgtttccacagcagcagaactacaaacgccatatggatggtatatatgga
cctccagcaaaacgtcatgatggagatatgtttaacatgcaatacagcaaccaacagcag
gagttgtttaaccagtacagcagtgcttactctggaccagataggagacccatccaggga
caatatccatatccttataacagagagaggatccaaggtcctggacaaatgcaacaacat
ggaatacctccacagatgattgctggccctatgcagtcatcagcttccagtgaaagccct
caacaaaatatatggcccacaagaaatgatatgtcttatccatatcagaacaggcaaggc
cctggggtccctgcacaggccccaccttatccagggatgaatcgtactgatgatataatg
gtacctgaccagagaataaaccatgaaagccagtggccttctcatgtcaaccagcgacag
ccttcttacatgtcatcctctgcttccatgcagcctattactcgacctcctcagtcatcc
tatcagacgccaccatcaatgccaaaccacatatctcgagctcctagccctgcatctttc
ccacgttctcatgaaaatcgtatgtctcccagtaaatctcctttcctatcctctatgaag
atgcctaaagttatgcccactcttccagtctcgcaggtcacaggtcctccaacacagcca
ccaccatctcttaggcgggaagtcacttttcctccaggttcggtagaagcatcccagcca
gttttaaaaccaaggcgaaagattacctcaaaagatattgtgagtccagaagcctggcga
gtgatgatgtctcttaaatcaggacttcttgcagaaagtacttgggcattagacactatt
aacattcttctgtacgatgacagtacagtggctactttcaatctctcgcagttatctggt
tttcttgagctgttggtggaatattttagaaaatgcctgattgatatttttgggatcctt
atggaatatgaagtgggacatccaggatcaaaactgcaagatcataattcatctctgaat
gaggatgggcagtctgcaacagaggatgtcaggaaagaggaagaaaacgatgaatgtatt
gattacttttatgatttggaagatgaggaggaagaagaggaagaagaagaaaatgagaat
acagaagaaggaaagagcactcttgttcctccacctggtgccattcttgatccaagtgag
aggccaaaacaagccagtaagtttgacaagttgccaataaaaattgtaaagaaaaacaac
ttatttgttgttgaccgatctgataggctggggcatgttcaggaattcaacagtgggctt
cttcattggcaacttggcgggggtgatacaaccgaacacattcagacccactttgagagt
aagatggagattcctccttgcaggcggccatctctatcagtctcctcaggtaaaaagaag
aatgtagagggcaaaggagaatctgaggaacaacaagacaaaagcatatcagccactatt
gatgatgtcttgtcagctcgtccgggagcattgtctgaagaccccgactctaactctcag
tcagatagtagtaaatttccatttgggatccatcaagtgaaaagtcatcgaaatatcaaa
ctgctggaagatgagccacgaagtcgagatgaaactcctctatgcaccattatacactgg
caagattctttggccaaacgttgcatctgtgtgtcaaatattgttcgcagcttatctttt
gtgcctggcaatgatgtggaaatgtccaaacatccaggcttggtgttaatcttgggaaag
ttgattcttctccatcatgagcacccagaaagaaagcgtacaccacagacgtatgaaaaa
gaggaagaagtggacaaaggggtggcctgcagcaaggatgaatggtggtgggactgcctt
gaggttttgagggataatacattggtcacactagccaacatttctgggcagctagactta
tctgcttatacagaaagcatctgtttgccaattttggatggcttactgcactggatggtg
tgcccctcagcagaggcacaagatccttttccaactgtggggcccaactcaatcctttcg
cctcagagacttgtactggaaaccctgtgtaaactcagtatccaagacaataatgtggac
cttatattggccacgcccccattcagtcgtcaggagaaactatatgctactttggttagg
tacgttggggaccgcaaaaatcctgtctgccgagaaatgtcaatggcgctcttatcaaac
ctcgcccgaggggacacattagcagcaagggcaatagctgtgcagaagggaagcattgga
aacttgataagcttcctggaggacggggtcaccatggcccagtaccagcagagccagcat
aaccttatgcacgtgcagcctccgcctctagagccacctagcgtggacatgatgtgcagg
gcagccaaggccttgttggccatggctcgggtggaggaaaaccgctccgaattcctttta
catgagggccgcttgctggatatctcaatatcagctgtcctgaactctatggttgcatct
gtcatctgtgatgtactctttcagatagggcagttatga
DBGET
integrated database retrieval system
