Protobothrops mucrosquamatus (Taiwan habu): 107292218
Help
Entry
107292218 CDS
T05763
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmur03037
]
107292218 (IFT140)
Cilium and associated proteins [BR:
pmur03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
107292218 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
TPR_IFT80_172
WD40_Prp19
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
TPR_GEMI5
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Clathrin
TPR_7
TPR_COPA_B
Beta-prop_WDR35_TULP_N
RNase_HII
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
107292218
NCBI-ProteinID:
XP_015676777
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MAVYIDHRIEALESCGPHTHIRWHRLQPLLAVASINANSGGSVDIFQEQGEYVGDAHLER
NFRVTYLSWHPSKLIVAVGCEMGDVVVVNKQDKEHHAVPSNHNADISILNWSTNGTRLVS
GDKLGVLVLWRMDQRGRVQGPPLLKHEYGKHLNFCIFRPPPPGEDLVQLAKAAVSGDEKA
LDMFNWRKSGMGLPLKMGPQEGLSFFVSVIDGTVHYVSERGKTSQALIIETSVQKMLFME
RDVLVVITEALLLSLHKISPEGEAEELLKVKLSGKMSHPADIILIDHSLLITATGEPLLR
FWDLERGENYVLSLDEQLGFEIGECVHCVSYCNAKGLLAAGTDKGRIAMWRKVPFSSQTT
WSLEGKDRWKLQTPTELEGSIIQIEWSSKKNLLAVNLTNSVAILREQAMASHFHQQMAVV
QVSPNLFNITSFSSKMMDNLRIDMHVNGVWATKDAVAFWNGKQVSIFELSAATLRNSGFF
LCESPVLAMHEENLYTVEPNRVQVRTWQGTVKQLLSFSESEGSPCFLDVCGNYLTVGTDM
SHFKIFDLSRREAKVHCNMLCNRIPASHFWDQNEPRLFVCEAVLDPNQQSLDKKQESSEN
AMDVLIVSFFSTEEHGLLLQDSFPLPSTYQSLLGMEVPHYYFAKKPEAEKKDEAEPGRVP
LHQMVARRPMRDFIGLEECDKMTCEAMLNFSFYLTIGDMDEAFKSIKLIKSEAVWENMAR
MCVKTQRLDVAKVCLGNMSHAQGAKALREAEQEPEQEARVAMLAVQLGMLEDAEQLYKQC
KCHDLLNKFYQASDQWQKAIEVAEAQDRVHLRTTYYNYAKHLEAIAERNFAITYYEKSDT
HKFEVPRMLSEDLQALEAYVNRMKDKGLWKWWAQYLEGQADLEAAFKYYELAQDYFSMVR
IHCFLGNIQKAAEIANATGNWAASYHVARQYESHEDIKQAVHFYTRAQAFNNAIRLCKEN
QLDDLLMNLALLSSPEDMIEAARYYEGREQMDQAVTLYHKAGHLSKALELAFATQQFAAL
QLVAEDLDEKSDPALLARCSDFFIEHAQYEKAVKLLLAAKKYQDALQLCLTQNLTITEEM
AEKMTISKDSKHLSEDSRRELLEQIADCCMRQGNYHMATKKYTQAGNKLKAMRALLKSGD
TEKIVFFAGVSRQREIYIMAANYLQTLDCRKDPEIMKNIISFYTKGRALDLLAGFYDSCA
QVEVEEFQNYEKALGALTEAYKCMSKAKTRSPAEQENKLAHLQTKMALVKRFIQARR
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcggtatacattgatcatcgaatagaagcgcttgagtcctgtggaccccacacccac
atcagatggcaccgtcttcagccacttttggcggttgcatccattaatgcaaactctggc
ggtagtgtggatatttttcaagaacagggagagtatgtgggtgacgcacacttggaaaga
aacttccgggtcacgtatctcagttggcacccctccaaactgattgtggccgtgggttgc
gagatgggagatgtggtagtagtgaacaaacaagacaaggagcatcatgctgtgccctcc
aaccataatgctgatatttcaatcctgaactggagtaccaatggaacacgtcttgtttct
ggagataaactgggggttcttgtcttgtggcggatggatcagcgggggagagtccaaggt
ccccctttgttaaaacacgagtatggaaaacatcttaatttctgcatttttcgcccacct
cctcccggagaagatttggtccagctcgccaaagctgcagtgagcggtgatgagaaggcc
ctggatatgtttaactggagaaaatctggaatggggctgcctctcaaaatgggaccccag
gaaggcctgtccttctttgttagcgtgatcgacggaactgtgcattatgtgagtgaaaga
ggaaagaccagccaagcattgattatagaaacctcagtccaaaaaatgttgttcatggaa
agagacgtcttggtagtaataacggaggctctcctcttatcccttcacaaaatttctcct
gaaggagaagcagaagaacttctgaaggtcaagttgagtggaaagatgagtcatcctgct
gatatcattttgattgatcatagcctccttatcactgcgacaggcgaaccccttcttagg
ttctgggatttggaacggggtgagaattacgtcctttctctggatgagcagctaggcttt
gaaatcggagaatgtgtccattgtgtgtcatattgcaatgccaaaggtcttctagcggct
ggcaccgacaaagggcgaatagctatgtggaggaaagtgccattctccagccagaccacc
tggtcccttgaaggcaaggacagatggaaacttcagacacccactgagcttgaggggagc
atcattcaaatcgagtggagctcaaaaaagaatctgctggcagtgaacctgaccaattca
gtagccatcctaagggagcaagccatggcttcccacttccaccagcaaatggcagtggtc
caggtttcccccaacttgttcaacatcaccagcttcagcagcaaaatgatggataacctc
cgtatcgatatgcacgtgaacggggtgtgggcaaccaaggacgctgtagcattctggaat
ggaaagcaagtttctatctttgaactctcggctgccactttgcggaattcaggttttttc
ctctgtgaatcccctgtgctggcgatgcacgaagagaacctttacaccgttgagccgaat
cgggttcaagttcgcacctggcaaggcaccgttaagcagctgctgtccttctccgaatct
gaaggcagtccctgctttctggacgtctgcgggaattacttgacggtggggaccgacatg
tctcactttaagatcttcgatctttctcgcagagaggcaaaggtgcactgcaatatgcta
tgtaaccgaatccctgccagtcacttctgggatcagaacgaaccaaggctgtttgtgtgt
gaagcagttcttgaccctaatcagcaatcattggataagaagcaagaatcgtcagaaaat
gccatggatgtgctgattgtatctttcttcagcaccgaagagcatggccttctgctccaa
gacagttttccgttgccatcaacgtaccagtctcttctgggcatggaggtgccacactat
tactttgccaaaaagccggaagctgaaaaaaaggatgaggcagaacctggcagggtcccg
ctgcatcagatggtcgctagaagaccgatgagagatttcattgggctggaagagtgtgac
aagatgacttgcgaagctatgcttaacttcagtttctacctaaccattggagacatggat
gaggccttcaagtctatcaaactcatcaaaagtgaagccgtctgggagaacatggcccgc
atgtgtgtgaagacccaaaggctggacgttgccaaagtctgcctggggaacatgagccat
gcgcaaggagccaaggcgttgcgggaggctgaacaagaaccggagcaggaagccagggtg
gccatgttagccgtccagttgggcatgctggaggacgccgagcagttatacaagcagtgc
aaatgccacgatcttctgaacaagttctaccaggcttcagaccaatggcagaaagccatc
gaggtagccgaggctcaggaccgcgtgcacctgcgcacgacctactacaattatgccaag
cacctggaagccatagccgagcgcaactttgccatcacctactacgagaagtccgacact
cataagtttgaagtgcctcgtatgctgtccgaggatctgcaagccttggaggcttacgtc
aacaggatgaaagataagggtttgtggaaatggtgggctcagtatctagaaggccaggca
gacctagaagcggctttcaaatattatgagttggctcaagattatttttccatggtccgt
atccattgcttcctgggtaacatccagaaggccgctgaaatagccaacgcgaccggcaac
tgggcagcttcgtatcacgtggcccgtcagtatgagagccacgaggacatcaaacaggca
gtgcacttctacacccgggctcaagcatttaacaacgcgattcgtttgtgtaaggaaaac
cagctggatgacctgttgatgaacctggctcttcttagttccccagaagacatgatagaa
gctgcccgctactatgaaggacgagaacaaatggaccaagcggtgacgctctaccataag
gccggacacttgtccaaggctctggagctggcctttgccacccagcagtttgcagccttg
cagctggtggcagaagacctggatgagaagtccgacccggccctgctggctcgctgctcc
gacttcttcatcgagcatgctcagtacgagaaggccgtcaagcttttgctagcggccaaa
aagtaccaggacgccctgcagctttgcctgacgcagaacttgaccatcactgaagagatg
gcggagaagatgaccatctccaaggactccaaacacctttccgaggattcccggcgggag
ctcctggagcagatcgctgactgctgtatgaggcagggcaattaccacatggccaccaag
aaatacacccaagcaggaaacaagctgaaggccatgagggctctgctgaaatctggcgac
acggaaaagattgtgttctttgctggcgtctcgagacaaagggagatttatatcatggcg
gccaattacctgcaaaccctggactgtcgcaaagatccagagatcatgaagaacatcatc
agcttctacaccaaaggaagggctctggacctcttggctggcttttatgactcctgtgcg
caggtggaggtggaagagttccagaactacgagaaggccttgggagccctgaccgaggcc
tacaagtgcatgtccaaggcaaagacgcggagcccagcggagcaagagaacaagctggca
cacctacagaccaagatggccctggtgaagaggtttattcaagcccgaaggtga
DBGET
integrated database retrieval system
