Protobothrops mucrosquamatus (Taiwan habu): 107292301
Help
Entry
107292301 CDS
T05763
Name
(RefSeq) collagen alpha-1(XI) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107292301
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmur00536
]
107292301
Glycosaminoglycan binding proteins [BR:
pmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107292301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Laminin_G_1
ResIII
Motif
Other DBs
NCBI-GeneID:
107292301
NCBI-ProteinID:
XP_015676867
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MHILNSSFSHFSAEPVDVLKALEFHKSPEGISKTAGICINRKNSKGSDVAYRVTKNAQLS
APTKQLYPGGKFPEDFSVLLTIKPKKGVQSFLLSIYNEHGIQQVGVEVGRSPIFLFEDQN
GKPAPEDYPIFGTVNIADGKWHRVAISVEKKSVTMIVDCKKKTTKPLERSSPAVVDTNGI
TVFGTRILDEEVFEGDIQQMLIVDDPRAAYDYCEHYSPDCDSPVPNASQAQEPQVEEYGT
EDLIEYDYDYGDPDYKDYKDLETITDGPPLYDETVAYTEKKKKAPKKKKTGIANSKNNPQ
KFKFKKSETLSSKKKKSSRAAAKGKIGANVVDEYHEYNVADYGTEAYQTAIPTQTTGRNE
QTPVEEVFTEEYVTGEDYNSKTKNNEETDYGNRGVDHSESEVLVDGDLGEYDFYEYKEYE
EKPTNPTNEEFGPGVPAETDITETTVNGHHVYGEKGQKGEAAVIEPGMLIEGPPGPPGPP
GFTGPSGMQGSTGPPGDPGDRGPPGRAGLPGADGLPGPPGTMLMLPFRFSGGGEKGPAIS
PQEAQAQAILQQARIAMRGPPGPMGLTGRSGPVGSPGSSGIKGDGGDPGPQGPRGIQGPP
GLPGKSGKRGRPGADGARGIPGETGSKGDRGFDGLPGLPGEKGHRGDRGPQGPPGAPGED
GMRGEDGEVGPRGLPGESGPRGLLGPRGTPGLPGQPGIPGVDGPSGPKGNLGPQGEPGPP
GQQGIPGPQGLPGPQGPIGVPGEKGPQGKPGLSGLPGTDGPPGHPGKEGQSGEKGDTGPA
GPHGPVGYPGPRGVKGADGIRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGALGPRGED
GPEGPKGRAGPTGDSGGPGQAGEKGKLGVPGLPGYPGRQGPKVNLLQH
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcatattctaaattcttctttttctcatttttcagctgagccagtggatgtcctcaaa
gcattagaatttcataaatctccagaaggaatatcaaaaacagccggcatttgcataaac
agaaagaattccaaaggatcagatgttgcctacagagttacaaaaaatgcacaactcagt
gccccaactaaacaattgtacccaggtggaaaatttcctgaagacttttcagttctactt
acaataaaacctaaaaaaggagtccagtcctttcttttatctatctacaatgaacacggc
attcagcaggttggcgttgaggtgggccggtcacctatcttcttgtttgaagatcaaaat
ggaaagcctgccccagaagattatcccatctttggtacagtaaatattgctgatggaaag
tggcatcgggtggccattagtgtggagaagaaatcggttaccatgattgtggactgtaag
aagaaaaccacaaaaccacttgagagaagcagcccggcggtcgttgacaccaatggcatt
actgtctttggaacacgaattttggatgaagaggtgtttgagggtgatatccagcagatg
ctgattgttgatgatcccagagcagcgtatgattactgtgagcactacagcccagactgt
gattctcctgtgcctaacgcttcccaagctcaagaacctcaagtggaggaatatggaact
gaagatttaatcgaatatgactatgactatggggatccagattataaagattataaagac
cttgaaactataacagatggacccccactatacgacgagactgtagcatacactgagaag
aagaaaaaagccccaaagaagaagaagacagggatcgctaactcaaagaacaacccccaa
aagttcaaattcaaaaaatctgaaacactgtcatcaaagaagaagaaaagctctcgagct
gcagccaaaggcaaaataggggccaacgttgttgatgaatatcatgaatataatgtggct
gactatggaactgaagcttaccagaccgcaatccctactcaaacaactggacgaaatgag
caaactcctgttgaagaagtatttactgaagaatacgtaacgggagaggattataattca
aagactaaaaataatgaggaaacagattatggaaacagaggcgtagaccacagcgaatct
gaagttctggtagatggagatttaggcgaatatgatttttatgaatataaagaatatgaa
gagaagccaaccaatcctactaatgaggagtttgggcctggagttcctgcagagactgat
atcacagaaacaaccgtgaatggccatcatgtatatggagaaaaaggacagaaaggagaa
gcagctgtcattgaaccaggaatgcttattgaagggcctccaggacctccaggaccgcct
ggttttacgggcccctctggtatgcaaggctccactggtcctcctggtgaccccggtgat
aggggtccaccaggacgtgctggtcttccaggggctgatggcttacctggacccccgggt
accatgttaatgttaccattccgcttcagtggaggtggtgagaagggcccagcaatctca
cctcaggaagctcaagctcaagctattcttcagcaagccaggattgcaatgagggggccc
cctggtccaatgggacttactggaagatctggtcctgtgggaagtcctggttcatccggt
atcaaaggtgacggtggagatccaggacctcagggtcctcgaggtattcaaggtccacct
ggtctgcctggaaaatctggtaaaagaggtcgtcctggtgcagatggagcaagaggaata
ccaggagaaacaggttctaagggtgacagaggttttgatgggcttcctggcctaccaggt
gaaaaaggacacaggggagatcgtggaccacaagggcctcctggtgctcctggggaagat
ggaatgagaggagaagacggtgaggttggaccaagaggccttccaggtgaatctggtcca
cgagggttattgggtccaagaggaactccaggactaccaggacaacctggaatcccaggc
gttgatggaccatcaggcccaaaaggaaacctgggtccacaaggcgaaccaggaccacct
ggacagcaaggtatcccaggtccgcaggggctcccaggtccacaaggtccaattggagtt
ccaggtgaaaaaggacctcagggcaaacctggtctgtcaggacttcctggtactgatggc
cctccgggccatccaggcaaagaaggacagtctggagagaaaggtgacacggggcctgca
ggtcctcacggtccagttggctatcctggtccccgtggtgtaaagggtgctgatggaatc
cgaggtctaaaaggtggcaaaggtgaaaagggtgaagatggcttccctggatttaaaggt
gatatgggccttaagggcgatagaggtgaagttggtgctcttggtcctcgaggagaagat
ggccctgaaggtcctaaaggccgtgcaggtcctacaggagactcaggtggccctggccaa
gctggagaaaagggtaaacttggtgttcccggtttgccaggatatccaggaagacaaggc
cctaaggtaaatttgctacagcattag
DBGET
integrated database retrieval system
