Protobothrops mucrosquamatus (Taiwan habu): 107292542
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Entry
107292542 CDS
T05763
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmur03041
]
107292542 (DDX20)
Enzymes [BR:
pmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107292542 (DDX20)
Spliceosome [BR:
pmur03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
107292542 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SiaC
AAA_19
CMS1
AAA_22
AAA_30
p55_CTD
Ceramidase_alk
Motif
Other DBs
NCBI-GeneID:
107292542
NCBI-ProteinID:
XP_015677127
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MEAPDAVPSMAETWLRTRDVLQEGPEDFGSLLLSAPVLEGLKAAGFLRPSPVQLKAIPLG
RCGLDLIVQAKSGTGKTCVFSTIALDSLILENSVTQILVLAPTREIAVQIHAVITTIGIK
MEGLECHVFIGGTPLNQDKMRLKKCHIAVGSPGRIKQLIELDYLNTSSIRLFILDEADKL
LEEGSFQEQVNWIYSSLPANKQMLAVSATYPESLANTLAKYMREPTFVKLNPTDPSLIGL
KQYYKVVNSYPLPHKIFEEKAEHLHELFRKIPFNQALVFSNLHSRAQHLADILSSKGFPA
ECISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHR
IGRAGRFGTLGLAVTYCCRGEEENTMMKIAQKCNLQLLSLPETLPPELLEHFEGGHVEVT
AVPYPNASPHTCLLPVKRPEGIRQHPTISASAEVIVCDNSPVAKPKQGFKQKKLLENRTE
EHPKTTMNRNKHENIPLKKHQVEPDCESAVHNNEQVDKESLKNMLPKIPCLSSFKNQDSV
CVWSMVEFIEDYEYFIKEGLERDVEIIRTYVNPRNQDKQLDSLDLVGMESSKYVAATTGT
LAGECDSDSRSCSSESSICSQENQSSSMQQRDNSILSTDEIHPQQFSPALKQKQFQDTFL
IPKKMKGNVKQSKQIKRDHYHSNHPFKTEFIEEASQSKNAPFPHNENSSPEEYWRRYYRA
WRKHYIEASRLYYQRYQRPLNMLTAYHANAVYLEELLKKDR
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgccggacgcggttccctcgatggcggagacgtggctgcgtactcgggatgtc
ctccaggaagggcctgaagattttgggtcgctgcttctttcagccccagttctggaaggg
ctgaaagcggcggggttcttaaggccttctccggtgcagctcaaagctattccgctaggc
cgttgcggtttagaccttattgtgcaagcaaaatcaggcacaggtaaaacctgtgtgttt
tctactattgcacttgactcccttatcttggaaaattcagtgactcagattctagtcttg
gctcctacccgagagattgctgtgcagatacatgcagtaattacaactattgggatcaaa
atggaaggtttggaatgtcatgtcttcattggaggaactcctttaaatcaagataaaatg
agacttaaaaagtgtcatattgctgtaggctctcctggtcgcattaaacaacttatagag
ctggactatttgaatacatccagcattcgtcttttcattcttgatgaagcagacaagctt
ttagaagaaggcagcttccaggaacaagtcaattggatttattcttctctaccagccaat
aagcagatgttggcagtttcagccacctatcctgaatccttagctaatactttggctaaa
tacatgagagaacccacgtttgtgaagctgaatcctactgacccaagtctcattggattg
aagcagtactataaagttgtgaattcttacccattacctcataaaatctttgaggagaag
gctgagcatttacatgagcttttcaggaaaataccgttcaaccaggccttggttttctca
aatctacatagccgagctcaacacttggcagatatattgtcatccaaaggttttcctgct
gagtgtatttcaggcagtatgaatcagaaccaacgacttgatgccatggctaagctgaag
cagtttcattgcagagtgttaatttcgacagatttgacttcccgtggaattgatgctgag
aaggtgaatctggttgttaacttagatgtccctttggattgggaaacatatatgcatcgg
attggtagagctggacgctttggaactctaggattagctgtgacatactgctgtcgtgga
gaggaagaaaatacgatgatgaaaattgcacaaaaatgtaatcttcagcttctttcttta
ccagaaactttgccaccagagctgctggaacattttgaaggagggcatgtagaagtcact
gctgtcccatatcccaatgcatctcctcatacatgtctgttgccagttaaaaggccagaa
gggattaggcaacacccaacaataagtgctagtgcagaggtcattgtttgtgacaattct
ccagtagccaagccaaaacaaggtttcaaacaaaagaagcttcttgaaaatagaacagaa
gagcatcctaaaacaacaatgaatagaaataaacatgaaaatatcccactgaaaaaacac
caagtggaacctgattgtgaatctgcagtgcacaataatgaacaggtggacaaagaaagt
ttaaagaacatgcttcctaaaatcccttgcctgtcgtcttttaagaaccaggattctgtc
tgcgtatggagcatggtggaatttattgaggattatgaatatttcattaaggaaggattg
gagagagatgtagagattataagaacttacgtaaatcccagaaaccaagataaacagtta
gattctttagatttagtaggaatggaatccagtaagtatgtggcagcaacaactgggaca
ttggctggggaatgtgatagtgatagtaggtcttgtagttctgaatcatccatctgtagc
caagagaatcaatcctcttctatgcagcaaagagataatagtatactgtcaacagatgag
atacatcctcagcaattcagtcctgcccttaagcaaaagcaatttcaggacacctttctg
attccaaagaagatgaaagggaatgtgaaacagagtaaacagatcaagcgtgaccattat
cactccaatcaccccttcaagactgaatttatagaagaggcatcccaaagcaaaaatgct
ccttttcctcacaatgagaattcaagtcctgaagaatactggagacgatattaccgggca
tggcggaagcattatattgaagcttctcgtttatactaccaaagatatcagaggccatta
aacatgctgactgcttatcatgccaatgcagtctacctggaagagctgttgaagaaagat
aggtaa
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