Protobothrops mucrosquamatus (Taiwan habu): 107292569
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Entry
107292569 CDS
T05763
Symbol
TDRD12
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmur03036
]
107292569 (TDRD12)
Enzymes [BR:
pmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
107292569 (TDRD12)
Chromosome and associated proteins [BR:
pmur03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107292569 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
107292569
NCBI-ProteinID:
XP_029141012
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MIEVLILKIENPDCFWVCIIGGRKFIDNEMEYKTLQTEMNQFYNKHYRCVDAKPCALEEG
QVCAVYYQELKSWCRAVVNSIISCTDYYIAECFLVDYAKTVPVKTEKICVVLKSFMRLPY
RAKKLRLYCVKPLTLRVNYYNDNAEIVPASKWDIAAVQYFQNLLKAATQAEAKLCAVEED
NFAVYLYVTISGEKVCVNDDLVAKNFACYELAVKFTDIVFRFSSLPKTSTKIQEVKNGLY
ENNLGVKLLQFLNPDSLKMATGQETEELKLNITTCLPVVLSNKIEPCPSLETAPLFPALK
KELLRNQFQGPNHVQSYSWPAIARGYDSLIISSESNPLSYLLPIITFLQSRNCYISLSAR
HGPVALIICPGQKKAELVFELLKKYTHCSRPLYPMLLFLGMNKEEIKNVRISRGCEIVVT
TPLSFLRLLEHHSLDFLRLCHLVFDEVDVLFSEAKDQIFSILQYYKSILSVEEKEFSPQQ
IVAVGNHWDKNVEILTKEFMNDPYIVITSMEEAAIYGKVQQVVQLCLECDRISTLLQTLD
FTPTDAQKTLIFTSSVEERDMVYKAVESISLFCLKINPGVGFHSDYIAEQWNKTISPGTH
VVLVLTDDCMAAARFTDATRVVHFSFPPTPRIFGARLHGLSVNFQNPVKKVXSKAKSILL
LTERNARHAVGVLHYLKRAEAFIPPDLYHFTRGVLEAEEEKRSGQPVCHSIKAYGICKNK
KRCPDRHRINLQTDVPSKVADEALQAGGVITILPLFIVDATNYFGRLGGKRGHSYAALET
EIKDYYQESSKRTSVDKVEKLAIYGLREEKSFHRVQVLDIGQKEDSGVFYNVHIKYIDEG
RTGYVQNYNLLSLPEQFRALPPQAVEFIVCRVKPIDNEAEWNPKVSRYINDKIRGKPHEA
KIALILGNTIWVDPVIRITKLQDLKTSINEYNIRSEILSTGLGVDNPEHIRELEKLFNEA
EIPHEKKDKPAFFHPTIKWFDKEDVVVVKVKLQNIRNYDCRIFEQRITFSALANGKFYLA
DMELQRSILREKSTCVVKGDEPTILLAKVKKEPWYNLLKQKNHHVSYDFDYLDDNEERGP
FCVGSSLKKEYQIPIGVCEEEEEEEESSKDSDSESDLSSC
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagtcttaatactgaagattgaaaatccagattgcttttgggtctgcataata
ggaggcagaaaatttatagacaatgagatggaatataaaacacttcagactgaaatgaat
caattctataacaagcattatcgatgtgtggatgccaagccctgtgcactagaagaggga
caggtttgcgctgtttactatcaggaactgaaatcttggtgcagagctgttgttaattca
atcatatcatgcacggattattacattgcggaatgtttccttgtggactatgccaaaact
gttcctgtaaagactgaaaagatctgtgtggtcttaaaatcatttatgagactgccttat
agagctaaaaagcttaggttgtactgtgtcaaaccactaacactacgtgtcaactactac
aatgacaatgcagagatagtgcctgctagcaagtgggacattgcagctgtccagtacttc
caaaaccttctgaaagcagccactcaagcagaggccaaattatgtgcggttgaagaggat
aattttgctgtctatctttatgtcacaataagtggtgaaaaggtgtgtgtgaacgatgat
cttgttgccaagaactttgcctgctatgaacttgctgttaagtttacagatattgtgttt
cgttttagcagcttacctaagacaagcaccaaaatccaggaagtgaaaaacggtctctac
gagaacaaccttggggtgaagcttctacagtttttaaaccctgattctctgaaaatggcc
actggacaagaaacagaggagcttaagctgaatatcactacatgtcttcctgttgtgctg
agtaataaaatcgaaccatgtccatctcttgaaaccgcaccactgtttccagctttaaaa
aaggagcttttaagaaatcaattccaaggacctaatcatgtacagtcttattcctggcct
gcaatagcccgtggatatgattcacttattatctcttctgaaagtaatccactttcatat
cttctgcccatcattacatttttgcaatcaagaaattgctacatatccttatcagctaga
cacggtccagtagcattaatcatatgccctggccagaagaaagcagaactggtatttgag
ctcctgaaaaagtacacccattgctcccggcctctctacccgatgttgcttttcctggga
atgaataaggaagaaatcaagaatgtaagaatttcaagaggatgtgaaatcgttgtaaca
acccctcttagctttttgcggctgctcgagcatcacagtttagacttccttaggttgtgt
catctggtgtttgatgaggttgatgtattgttctcagaagccaaggatcagatatttagt
attttacaatactataaatctatcctgagtgttgaagaaaaggagttttcaccgcagcag
attgttgctgttggaaaccactgggacaaaaacgtagagattttaacaaaagaatttatg
aacgatccatatattgtaattacctccatggaagaagctgccatctatgggaaagtgcaa
caggttgtgcagctgtgtcttgagtgcgaccggatctccactttgcttcaaacattagat
tttaccccgacagatgctcaaaagactctgatttttacaagttctgtagaagaaagagac
atggtatacaaggcagtggagagcatttcactcttttgcttgaaaataaacccaggagtc
ggatttcattctgattatattgctgagcagtggaacaaaactatcagccctggcacccat
gttgtattggttttaacggatgactgcatggcagctgcaagatttacagacgcaacacgt
gtcgttcatttcagctttcccccaactccgagaatctttggtgcccgtctacatggcctg
tctgtcaacttccagaatccagtaaagaaggtctgaagcaaagccaaatccatcttgctg
ttgacagagagaaacgcccgtcacgcagttggagtgttgcattatttgaagcgggcagaa
gccttcattccccccgacttgtaccactttaccaggggagtcttggaagccgaagaggag
aagagaagcgggcagccagtttgtcattccattaaggcctatggaatatgcaaaaataaa
aaacgctgtccagatcgccatcgcattaaccttcagactgacgtgccctcaaaagtagcc
gatgaagctctgcaagcaggtggagttataacaatactgcctctttttatcgtggatgcc
acaaactactttggccgcctgggagggaaacggggtcattcctacgcagctcttgaaacg
gagataaaggattactatcaggaatctagcaagcggacctcggttgacaaagtggagaag
ctggcaatatacggactgcgggaagagaagtctttccatagggttcaagtgctagacatt
ggacaaaaagaagactccggtgtgttttacaacgttcacatcaagtacatagatgaaggc
agaactggctatgttcaaaattataacttgcttagtttaccggaacagtttcgagcgttg
cctcctcaggctgtggagttcatagtttgtagggttaaacccatcgataatgaagcagaa
tggaatccaaaagtgtctagatacattaatgacaaaatcagagggaaaccacatgaagca
aaaatagcacttatcctgggaaatacaatttgggtagatccagtgattcgaatcactaaa
cttcaagacctgaaaacttccatcaacgaatataatatccgctctgaaatcctatctact
ggattgggagtagacaatcctgagcatatacgggaacttgagaaattatttaatgaggct
gaaataccccatgagaaaaaagataagcctgcattcttccatccaacaataaaatggttt
gacaaggaagatgttgttgttgtaaaggtaaaattgcaaaacattaggaattatgactgc
aggatttttgaacagaggatcactttcagtgctttggcaaacggcaaattttatttggcc
gatatggagctgcagagaagcatcctcagagaaaaatcaacttgtgtagttaagggcgat
gagcccaccattctccttgcaaaagtgaagaaggaaccttggtacaacttgttaaaacag
aagaatcatcacgtatcttatgactttgattatttggatgataatgaggaaagaggcccg
ttctgtgtaggatcaagccttaagaaagagtatcagattcctataggagtgtgtgaagag
gaagaggaggaggaggaatcttcaaaagacagtgattcagagagtgatttatcctcttgt
taa
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