Protobothrops mucrosquamatus (Taiwan habu): 107292643
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Entry
107292643 CDS
T05763
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03040
Spliceosome
pmur04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107292643
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107292643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmur03041
]
107292643
04121 Ubiquitin system [BR:
pmur04121
]
107292643
03400 DNA repair and recombination proteins [BR:
pmur03400
]
107292643
Enzymes [BR:
pmur01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107292643
Spliceosome [BR:
pmur03041
]
Complex B
Other components
Prp19 complex
107292643
Complex C
Prp19-CDC5 complex
107292643
Ubiquitin system [BR:
pmur04121
]
Ubiquitin ligases (E3)
U-box type E3
107292643
DNA repair and recombination proteins [BR:
pmur03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
107292643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WD40_RFWD3
U-box
Beta-prop_SPT8
eIF2A
Beta-prop_Nup120_160
PROPPIN
Beta-prop_ACSF4
RMC1_N
Ge1_WD40
Cytochrom_D1
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_DCAF12
zf-Nse
Beta-prop_LRRK2
Nucleoporin_N
Prp19
DUF1830
Motif
Other DBs
NCBI-GeneID:
107292643
NCBI-ProteinID:
XP_015677240
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MSLICSISNEVPEHPCLSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLLDIKVAHP
IRPKPPSATSIPAILKALQDEWLQDKATVLTTERKKRGKTVPEELVKPEELNRYRQVASH
VGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFH
PSQELVFSASPDATIRIWSVSGASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFS
DIQTGRVLTKVTDETSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSG
PITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALG
GTDVQVFICKQWTEVLHFTEHSGLTTGVAFGHHAKFLASTGMDRSLKFYSL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcatatgctccatttctaatgaggtaccagagcatccctgtctgtccccagtc
tcaaatcatgtttatgagcgaagactgattgaaaagtatattgcagagaatgggactgat
ccagtaaacaatcagccactgtctgaggaacagctgctagatattaaagttgcccaccca
attcggcctaagcctccttctgctaccagtattccagctatcctgaaggccttacaagat
gaatggcttcaagacaaagccacagtgctgaccacagagcggaagaagagagggaagact
gtgccagaggagctggtgaaaccagaagaacttaatagataccggcaggtggcttcacac
gtgggattgcacagtgccagtatccctggcatccttgctcttgacctgtgtccttctgat
accaacaagatcctaacaggtggtgctgataaaaatgttgttgtctttgacaagagctca
gaacagatcctggccaccctgaaaggtcacacgaagaaggtcaccagcgtcgtgttccac
ccatcccaggaactggtgttctcagcatctccagatgccactatccgtatttggtcagtc
tctggcgcttcctgtgtgcaggttgtacgagcccatgaaagtgctgtcacagggcttagt
ctccatgcaactggcgattatcttctgagctcttctgatgaccagtattgggctttctct
gacatccagactggccgtgttctcaccaaggtcaccgatgaaacctctggctgtgctctc
acctgtgctcagttccaccctgacgggcttatttttgggacaggaacaatggactcccag
attaagatctgggacctaaaggagcggactaatgtcgcaaacttccctggacactctggt
cccattactagcatcgccttctccgagaacggctactacttggccactgctgctgatgac
tcctcagtcaaactctgggatctccgcaagctgaagaatttcaagacgctgcagctggat
aataactttgaggtgaagtctctcatctttgatcagagtggtacctatctggccctgggt
ggtactgatgtccaagtgttcatctgtaagcaatggacagaagttcttcatttcacagag
catagtgggctgacaacaggagtagccttcggacaccatgctaagttcctcgcgtccaca
ggcatggacagaagcctgaaattctacagcctgtag
DBGET
integrated database retrieval system
