Protobothrops mucrosquamatus (Taiwan habu): 107292756
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Entry
107292756 CDS
T05763
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmur04040
]
107292756 (TRPC1)
Ion channels [BR:
pmur04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107292756 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
Dsc3_C
DUF2157
RIN1
Motif
Other DBs
NCBI-GeneID:
107292756
NCBI-ProteinID:
XP_015677359
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENST
GELNINCVDVLGRNAITITIENENLDILQLLLDYGCQSTDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLRELSLVEV
EFRNDYGELAQQCKTFAKDLLAQARNSRELEVILNHTASDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVSQSNCQQFLNTVWFGQMAGYRRKHTFKKILTVLTVGIFWPLLSFCYLLAP
KSQIGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKVNNHSYVNMSIKL
YFSTTEVLRHSFXFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFS
FTIGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAVFVTR
FNYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLS
YFDDKCTLPPPFNIIPSPKTICYIFNSLSKWISSLTSSGKVKRQNSLKEWRNLKQKRDEN
YQKVMCCLVHRYLTSMRQRMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAIFY
QRN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctataccagagtgcagacccatcggcctcggcttccccgaacaagctgctg
gcgttgaaggacgtccggcaggtgaaggaggagaccaccctggacgaaaagctcttcctg
ctggcctgcgacaaaggtgattattacatggtgaagaagcttttagaagagaatagtact
ggtgagctgaacataaattgtgtggatgtacttgggagaaatgctattacaataactatt
gaaaatgagaatctagacattctacagcttctgttggattatggctgtcagtctacagat
gcattattggtggccattgactcagaagttgtgggagctgttgatatattacttaatcat
cgaccaaagcgatccagtagaccaacaattgttaaattaatggaacgtattcagaatcca
gaatactcaacaactatggatgtggcacctgtcattttagctgctcaccgtaacaactat
gaaattcttacaatgctcttaaaacaggatgtgtcgctacccaaacctcatgctgtgggg
tgtgaatgtacattgtgtacagccaagaacaaaaaagatagtctacgacactccagattt
cgtcttgatatttatcgatgtttggctagtcctgccttaataatgttgacagaagaggat
ccaattctgagagcctttgaacttagtgcagacttaagagaattaagtcttgtagaagtt
gaattcagaaatgattatggagaactggcccagcaatgcaaaacttttgctaaagatttg
cttgctcaggcacggaattcccgggagcttgaagttatattgaatcatactgcaagtgat
gaacatgtggataaacgaggattactagaagagagaatgaatttgagtcgcctaaagctt
gccattaagtataaccaaaaggaatttgtttctcaatctaattgccagcagtttctcaat
actgtctggtttggacaaatggctggttatcgccgcaagcatacatttaagaagattttg
acagtcttgacagttggcatcttttggcctctactatctttttgctatttactggcacca
aaatctcaaataggcagaataattcatactccttttatgaaatttatcattcatggcgct
tcttattttacatttctgttattgcttaatctgtattcacttgtctacaatgaagataag
aaaaacacaatgggaccagcattggagagaatagactatcttctaatactgtggctcatt
ggaatggtatggtcagatgttaaaagactttggtatgatggattggaagactttttagaa
gaatcacgaaatcaacttagttttgtcatgaattctttgtatttggcaacttttgctctc
aaagtagttgctcataataaggtaaacaatcattcttatgttaacatgagtattaagttg
tatttttcaacaactgaagtcttaagacattcattcnnntttgctaatgttctcagttat
ctccgactgttcttcatgtatacaacaagctccatcctgggtccacttcagatttcaatg
gggcagatgttgcaagattttgggaaatttcttggtatgtttcttttggtattgttctca
ttcacaattgggttgactcaactttatgataaaggatttactgtcaatgaagagaaggac
tgcgctgggattttttgtgagcagcaaagcaacgacacattccactcgtttattggcacc
tgctttgctctgttttggtatatattctcccttgcacatgtagctgtatttgtcaccaga
tttaattatggtgaagaattgcagtcttttgtgggtgctgttattgttggcacatataac
gtagtagttgtgattgttcttaccaaacttttagtggcgatgcttcataaaagttttcag
ctaatagcaaatcatgaggataaggaatggaagtttgctcgtgcgaagctgtggcttagc
tatttcgatgataaatgcacactacctccacctttcaatattattccttctcccaaaaca
atctgctacatatttaacagtctcagtaaatggatttcttctctcacatcatcgggcaaa
gttaagcggcagaacagtttaaaggagtggagaaatttgaagcaaaagagagatgaaaat
taccaaaaggtgatgtgttgtttagtccatcgttacttgacttccatgagacagagaatg
caaagcactgatcaggcaacagtagaaaacctgaatgaactcagacaagatttatccaaa
ttccgaaatgaaatgagagacttgcttggttttcgaacatcaaaatatgccatattttat
caaagaaactaa
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