Protobothrops mucrosquamatus (Taiwan habu): 107292865
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Entry
107292865 CDS
T05763
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmur03009
]
107292865 (DCAF13)
04121 Ubiquitin system [BR:
pmur04121
]
107292865 (DCAF13)
Ribosome biogenesis [BR:
pmur03009
]
Eukaryotic type
90S particles
Other 90S particles
107292865 (DCAF13)
Ubiquitin system [BR:
pmur04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107292865 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
eIF2A
ANAPC4_WD40
MIOS_WD40
WDR90_beta-prop_4th
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
107292865
NCBI-ProteinID:
XP_015677481
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MRVKVLSRNPDDYVRETKQDLQRVPRNYDPALHPFEIPREYTRALNATKLDRIFAKPFLA
SLDGHRDGVNCIAKHPQSLSTVLSGACDGEVRIWNLMKRVCIRTLQAHEGFVRGMCTRFC
GTSFFTVGDDKTVKHWKMEEPAYGEAEEPINTILGKTVYTGIDHHWKKPIFATCGHQVDI
WDEQRTSPICSLTWGVDSINSVKFNPIEMNLLGSCTSDRNIVLYDMRQSTALKKVILDMR
TNTLCWNPMEAFIFTAANEDYNLYTFDMRFLGKALMVHMDHVSAVLDLDYSPTGKEFVSA
SFDKSVRIFPADKGHSREVYHTKRMQHVITVKWTSDNKYILCGSDEMNIRLWKANASEKL
GVLAPRERAAINYNQKLKEKFQHHPQIRRINRHRHLPKMIYSQAKELRIMKEARRRKELN
RRKHSKPGSIPLVSEKQKHIMAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgaaggttctcagcaggaacccggacgactatgtgcgcgaaaccaagcaggac
cttcagcgggttccacgaaattacgatcctgcgttacatccgtttgaaattccacgggaa
tacacaagggcactaaatgcaactaaattagatcgtatatttgcgaaaccttttcttgca
tcattagatggtcatcgggatggagttaattgcatagctaaacatccacagagcttgtct
acagttctgtctggagcatgtgatggagaggttagaatctggaacttgatgaagcgtgta
tgcatccgtacattgcaagcacatgagggctttgtaagaggaatgtgtacccgtttttgt
ggcacctctttcttcactgtaggtgatgataaaacagtgaagcactggaaaatggaggag
ccagcttatggggaagcagaagaaccaataaataccattcttggaaagacagtgtacact
ggaattgatcatcattggaagaaacctatatttgctacttgcggtcatcaagttgatatc
tgggatgagcagagaactagtcctatatgttctttgacttggggagtcgatagcataaac
agtgttaaattcaatccaattgagatgaatcttttgggaagctgtacttcagacagaaat
attgtgctgtatgatatgagacaatcaactgccctaaagaaggttattttggatatgaga
acaaatacactttgctggaatcccatggaagctttcattttcactgcagcaaatgaggat
tacaacttatatacttttgatatgcggttccttggcaaggctttaatggttcatatggac
catgtgtctgcagtcctggatttggattattcccctacaggaaaagaatttgtgtcggcc
agctttgataaatctgttcgcatttttcctgcagacaaaggtcatagcagagaggtctat
catacaaagagaatgcaacatgtcatcactgtcaaatggacatcagacaataagtacatt
ttgtgtggctctgatgaaatgaacattcgtttgtggaaagcaaatgcttctgaaaagctg
ggtgtgcttgctcctcgagagagagctgctattaactataatcagaaactgaaagaaaaa
ttccagcatcatccccaaatcagacgtataaatcgccatcgtcacttaccaaagatgatc
tatagtcaagccaaagagctacgcatcatgaaagaagctcgtcggcgaaaggaactgaac
cgtcgtaaacatagcaagcctggatctataccacttgtgtcagaaaagcagaaacacatt
atggctgtagtaaaataa
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