Protobothrops mucrosquamatus (Taiwan habu): 107293026
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Entry
107293026 CDS
T05763
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmur03000
]
107293026 (RC3H2)
04121 Ubiquitin system [BR:
pmur04121
]
107293026 (RC3H2)
Transcription factors [BR:
pmur03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
107293026 (RC3H2)
Ubiquitin system [BR:
pmur04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107293026 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-CCCH
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
zf-C3HC4
zf_CCCH_4
Prok-RING_4
zf-C3HC4_4
zf-C3HC4_2
Luteo_PO
PPP1R21_C
Motif
Other DBs
NCBI-GeneID:
107293026
NCBI-ProteinID:
XP_015677639
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKACLSKLHRKACPFDQTAIHTD
IDVLPVNFALLQLVGAQVPERQAVKLSNLGENKHYELAKKCVEDLALYLKPLSGSKGVAS
LNQSTLSRPMQRKLVTLVNCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLELRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIALEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRLHLEFLANI
DPNPDAASPTWEQLENALVAVKTVVHGLVDFIQNYSRKGPEIPQPQPNSKYKTSLCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKIGATVRPFPLLGKASIPSVVPIIGNADPAGK
AASSTNESPSPESVAPQLIPRCTNTPLLRTLEHMKKGGKAVANGQNPTLSPTEPLPEHKT
RSPPKTPVNQTAATSTGPVPPPPPPLPPSPALVGNEISPLAPKPSPFATRLPIYPAHSEI
LPYFQDPRAHLSYEAPPYPQTGYYPGPPAVPTAVPPCLPRFVRSSSVSESSLPPASLQYS
EPYGTFPSRDRLTAAYQQAQPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNS
LPPMEVAHPSVYHNFVRERYGSLDSYCSVPCQVPAEQRAVPWAREPCGHLKPAYEDPLRK
KPEQWAPCHIPKVPVVTTSALPAAAPSPSSPSPFFSVDFSCEFSKNSSGSSDPRYEDGQL
CQYSPWSCSTLSSCISAVEAEPKDVLAKSSTVLLDLDSGEPKRPAHLFETQRKAKEEDPI
IPFSDGPIISKWGAISRSSRTGYHTTDPVQATASQGSTTKPISMSDYIPSISSVDLRWSC
YAPESTSSAPFLERDQFVSPGEPAPPKHSSTGDLLSTELQQAKSNSVLLQREANALATQQ
KWEALSEGSALTLTLLSKETNGRVSRLQADSPEDSMGTKANRDIELELSSLDTDEAEGSG
EQMEEMLGLQLAIGGQSENLFNGSALENGHLAEQPQVDARQAKRPVLHEELARLEKQTGV
LPAASCFSQPTETAGSRISLPIMTSASMGSLLLKTAHGLVDGPNDFLRPIANGKMVNT
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggccgcccagtggacggagttcctgtcctgtcccatctgctacaatgag
tttgacgagaacgtgcacaagcccatcagcctgggctgctcccacaccgtctgcaaggcc
tgcctgagtaagctgcaccgcaaggcctgccctttcgaccagaccgccatccacaccgac
atcgacgtgcttcccgtcaactttgcgctgctccagttagtgggagcccaggtgcctgaa
cgccaggctgtcaagctaagtaacctgggagaaaacaaacactacgaactggcgaagaaa
tgcgtggaagacctcgccctttatttgaagcccctgagcggaagtaagggtgtggctagc
ttaaatcagagcacgctgagccggccgatgcaacggaagctggtgaccctggtgaactgc
cagctggtggaagaagaaggccgcatccgggcgatgcgggcagctcgctccctcggggag
aggaccgtcaccgagctgatcttgcaacaccagaaccctcagcagctctcggccaatctc
tgggccgctgtccgggccagggggtgccagttcctcgggccggctatgcaggaggaagcc
ttgaaactggtcctgctggccttggaagacggctcggccctgtcccgcaaagtcctggtg
ctgtttgtggtccagcgcctggagctcaggttccctcaggcgtcgaaaaccagcatcggc
cacgtggtgcagctgctctaccgggcgtcctgcttcaaggtcaccaagcgggacgaggac
tcttccctgatgcagctgaaggaggagttccgcagctacgaggccttgcggagggagcac
gacgctcagatcgtccacatcgccctggaagccggtctccggatctctcccgagcagtgg
tcctccctcctgtacggggacctggcccacaaatcccacatgcagtccatcatcgacaag
ctccagtctccggagtcctttgccaaaagcgtgcaggaattaaccattgttctgcagcga
acgggggaccccgccaacctgaatcggcttcgtctccatttggaattcttggcgaacata
gatcctaacccagatgcggcgtctccaacttgggagcagctggagaacgccctggtggcc
gttaagacagttgtccatggccttgtcgacttcatccagaactacagcaggaaaggccct
gaaattccacagcctcagccaaacagcaagtataaaaccagcctatgccgcgaccttaga
cagcagggcgggtgtccgcgcgggaccaactgcacctttgcccactcgcaggaggagctc
gagaagtatcggctgagaaacaagaaaatcggtgccacggtaagacccttcccgctgctt
gggaaagccagcatcccaagcgtcgttcccatcatcggaaacgcagacccggcgggaaag
gcggcgtccagcaccaatgagagtcccagcccggagagcgttgccccccagctgatcccc
cgttgtaccaacacccctttgttacggactctggagcacatgaagaaaggggggaaggct
gtggcaaacggccagaaccccactttgtctcccaccgagcctctgcccgaacacaaaacc
agatcccctccgaaaacgcctgtgaaccagactgcagctacctcaacaggccccgtccct
cctccccctcctcctcttcctccctctccagcccttgtgggcaacgagataagccccctc
gcccccaaacccagcccttttgccacccgcctgcccatctacccggctcactcagagatt
ctcccgtatttccaggatcctcgggctcatctctcctatgaagctccgccttacccgcaa
acaggatattatccaggccccccggcggtccctacagcggtgcctccctgcctccctcgc
tttgtgaggtccagcagcgtctccgaatcctctctcccgccggcctctctacagtacagt
gaaccttacggcacgtttccttctcgggacagactcaccgctgcttaccaacaggcacaa
ccgcagccctacgggccggtgccaccggttccttccgggatgtacgccccggtttatgac
agccggcgtatttggcgaccaccgatgtaccagagggacgatatcatccggagcaactcc
ttacctcccatggaagtcgcccacccctccgtctatcacaattttgtgcgggaaagatac
ggctctttggacagctactgttcggtgccctgccaggtgccagcggagcagagggctgtg
ccttgggcaagggaaccttgtggacatctgaagcctgcctacgaggaccctctccgaaag
aaaccggaacagtgggcgccttgccacatcccgaaagtgcccgtggtgacgacgtccgct
ctccctgcagccgcaccgtctccgtcctccccttcccctttcttcagcgtggacttcagt
tgtgaattcagcaagaactccagcggctcgagcgaccccaggtacgaagacggccagctg
tgccagtactcgccctggtcctgcagcaccctcagctcctgcatcagcgcggtggaggcc
gagccgaaggacgtcctggctaaatccagcacggtcctcctagatctggacagcggagag
cccaagaggccggcccatctctttgaaacccagaggaaggcgaaggaggaggaccccatc
atccctttcagcgacgggccgatcatttccaagtggggcgccatctccaggtcatcacgg
acaggctaccacaccacggaccctgtccaggcgactgcttcccaaggaagcactaccaag
cccatcagcatgtcagattatatccccagcatcagctccgtggacttgaggtggagctgc
tacgcgcccgagtccacttcctcggcacctttcctagaacgggaccagttcgtttctccc
ggggaaccggctccgccaaagcactcgagcaccggagatctcctgagcaccgaattgcag
caggccaaaagtaactcggtgctgctccagagagaggccaacgccctggccacgcagcag
aagtgggaggccctgagcgaaggcagcgccctcaccttgacgctcttgagcaaggaaacg
aacggccgggtaagcaggctccaggctgactcccccgaggacagcatgggcaccaaggcc
aaccgagacattgaactggaactttcatcgctggacactgatgaggccgaggggtccgga
gagcaaatggaagagatgctgggcctgcagctcgccatcggcggtcagagcgagaacctc
ttcaacgggtcagctctggagaacggtcaccttgcggagcagccccaggtggacgccagg
caggcgaagaggcctgtcctgcatgaagagcttgctcgtttggagaagcagacgggggtc
ttgccagcggcgtcctgtttcagccaacccacggagacggcaggcagcaggatctccctg
cccatcatgacgtccgccagcatgggcagccttcttctgaaaacagcccacggcctcgtg
gacgggccaaatgactttttgaggccgattgcaaacggcaaaatggtgaacacgtga
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