Protobothrops mucrosquamatus (Taiwan habu): 107293959
Help
Entry
107293959 CDS
T05763
Symbol
SCAF8
Name
(RefSeq) protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmur03021
]
107293959 (SCAF8)
03041 Spliceosome [BR:
pmur03041
]
107293959 (SCAF8)
Transcription machinery [BR:
pmur03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107293959 (SCAF8)
Spliceosome [BR:
pmur03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107293959 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107293959
NCBI-ProteinID:
XP_015678637
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MEAVKAFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLPGTTATLSNNTPGTPVTPATPANVIQSLPDPWV
SQITNTDTLAAVAQILQSPQGQQLQQLIQTLQMQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAAAAANTLNPLEQSVSFNKKLIDRFGDFGEEADLNEEPKKETPTSQLPLVSESVNNS
LFHQLAEQLQQQNLEHLRQQLLDQQPPKVSPEETQEENFGSEHSASPSQDSSHQQFLEVE
TKLDNSMDVQQQDMDIDEAQEIVEQEVFEQEEKKPAVLSRSRTRSRSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPVRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKI
GSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKVDDLDGFAEGGMIDQETVNSEW
ETTRTSETVKESVQITQSATVDKTTVVTTQAETYKQSVTMLQMPVAPTVPTVNLVPPAFP
VTMSVPPPGYSGIPPPPFLRASFNPSQPPPGFMPPPVPPPVPPPVVPTSLVQPSLTIAQE
SMKDFSSLVLPGGTVSSSLTTPTLSAGSVFSSLSNNSSELDEKGSLRADLQTSSTENRTV
QDDVSSSSGLTEGVQPPGITTSSGHVGGIQPPHVSSSAGLVQPVSVSSSSGLLTRVQPPT
ASNSSGLITGVQAPSVSSSSGLLSGLQPINVSSSSSLLMGIQPPIVSNNTGRLSGIQPPI
VSSSSGLLSALQPPIVSSNSAILGLPPPMVSSSSGLLGLPPPNISGGSGLLGLQPPSGIQ
NLPHLTISSQRLPGIPLVEIRSGLIPQPPGPRFPLLQHGMPPQRTVPPPAILDPSLPPPR
VPFLPGDIFTQTERPFATSGRHNMDISNPDKRLSVGEDSIQQEGDRDYRFPPMESRDRTS
SIDIRDSVGRPPLDPREGLGRPPMDGREHLLRPHIDLRENFGRPGIDNLRREHFAFNSEK
HWGQRGDYDEREHQTFPVYGGLKGFQEARDRYRQTNYRFEIRSGPTWNRGLEQDAHRDFD
DRRRPWERQRDRDDRDFNFGREMNGNRFGRERTQNNWIPPPHPRVFEYFEGGASQQKVDS
VPQVNGENTETENQPSAVQVQDELELYEKLATSNETKKEKSDTEAELETEPVVESTETEG
T
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaagcttttaatagcgagctttactcactgaatgattacaaacctcct
atttcaaaggctaaaatgacacagattactaaagcagcaatcaaggccataaagttctac
aaacatgttgtgcagagtgttgagaaattcattcaaaagtgtaaaccagaatacaaggtg
cctggcttatatgtcattgactcgattgtacggcagtctcggcatcagtttggacaagaa
aaggatgtctttgctcctcggtttagcaataacatcattagcactttccagaatttatat
cgttgccctggggatgataagagtaaaattgttagagtgctcaatttgtggcagaagaat
aatgtgttcaaaagtgaaattattcagcctctattggatatggcagcaggaattcctcct
ccagttgttactcctgttttgccagggacaactgctactttgagtaataatacaccagga
actccagtgactcctgctactccagccaatgtaatccaaagtttacctgatccatgggta
tctcagataactaatacagatacgcttgctgctgtagcacagatccttcaaagtccacaa
ggacaacagcttcagcagttaatacagacattgcagatgcaacaacaaaaaccacaacca
tcattgcttcaagcactggatgctggtctcgtcgttcagctacaggctctcactgctcaa
cttacagctgctgctgctgccgccaatacactcaatccactagaacagagtgtctctttt
aacaagaagctgatagataggtttggagattttggagaagaagctgatttgaatgaagag
cccaaaaaggaaactccaacttctcaattgccgcttgtatctgaatccgtgaacaattca
ctttttcatcagctagctgaacaactacagcaacaaaacttagaacatcttcggcagcag
cttctagatcagcagccaccaaaggtcagccctgaggaaactcaagaagaaaattttggt
tctgagcattcagcatcaccttctcaagacagcagtcaccaacagtttttagaagtggaa
acaaagcttgacaattcaatggatgttcaacaacaggacatggatatagatgaagcccag
gagattgtagaacaagaagtctttgagcaagaagaaaagaagccagcagttctttcaaga
tcacgaacacgctcaagatcacgttcaaggtcaccaagaaaaagaaggtcaagatcacgg
tctggttctcgaaagcgtaaacacagaaagcgctcgcgttctaggtcaagagaaagaaag
aggaagtcatcaagatcatactcaagtgaaagaagagctagagaaagggaaaaagaaaga
cagaaaaaaggattacctcctgtccgatcaaaaacactaagtgtctgcagtaccacgctt
tgggttggtcaagtggacaagaaggccacccagcaagatttaaccaatttatttgaagaa
tttggacaaatagaatctataaatatgatccctcccagaggttgtgcatatgtctgtatg
gttcataggcaagatgcttatcgtgctcttcagaaattaagctctggatcttacaaaatt
ggatctaaaattattaagattgcatgggctttaaacaaaggagtgaaaactgaatacaaa
cagttttgggatgtggatcttggagtatcatatataccctgggaaaaagttaaggtggat
gatttagatggctttgcagaaggaggcatgattgaccaggaaacagtaaatagtgaatgg
gaaactacaaggacttcagagactgtaaaagagagtgtgcagataacccagagtgcaact
gttgacaaaaccacagttgtcacaacacaggcagaaacgtataaacaatctgtcactatg
ttacagatgcctgtagcgccaactgtgccgactgttaatttagttccacctgcatttcct
gttacaatgtctgtccctccacctggttacagtggaattcctccacctccattcttgaga
gcaagctttaatccttcacaaccaccacctggtttcatgcctccacctgttccgccacct
gttccaccacctgtagtcccaacatctcttgtacagccgtcgctgactattgctcaagaa
tcaatgaaagattttagcagccttgttctaccaggtggtactgtttctagtagtcttacg
acaccaacattatctgccggaagtgtcttttcttctctttcaaataacagttcagaattg
gatgaaaaaggatctcttcgtgctgatcttcaaacctcttctaccgaaaacagaactgtt
caagatgatgtttcaagcagttctggacttaccgagggagtacagccacctggtatcaca
accagttctgggcatgtagggggaatccagccaccacatgtctcaagtagtgctggactt
gtgcagccggtcagtgtctcaagcagctctggacttttgacaagagttcaaccacccact
gcttcaaatagctctggtcttataacaggtgttcaggctccaagtgtctcaagtagctct
gggcttttgtcaggacttcagccgataaatgtttcgagcagctccagccttttaatgggt
atccaaccacccatagtctcaaataatactggacgtttgtcaggaatccagccacccatt
gtatcaagtagttctgggcttttgtcagcactccagccacccattgtatcaagcaattct
gcaattttaggattgccaccaccaatggtttcaagtagttctggactgttaggattgcca
ccaccaaatatttcaggtggttctggactattaggactacaaccaccctctggaattcaa
aatttgccccatttaactatttctagtcaacggttgcctggaattcctctagtagaaatc
cgatcgggattaataccacaaccacctggtcctagatttccactactgcaacatgggatg
ccaccacaacgtacagttcctcctccagctatacttgatccatcccttcctccacctaga
gttcctttccttccaggagatatttttactcaaacagagaggccatttgcaacttctggt
aggcacaatatggatatttctaacccagataaaagattgtctgttggggaagatagcatt
caacaagaaggagatagagactatcgctttcctccaatggaaagtagagatcgaacatct
tcaatagatataagggattctgttggaaggccaccactagatccaagagaaggtctaggt
cgacctcctatggatggaagagaacatcttctcagaccacatatagatttacgggagaac
tttggaaggccaggtattgataatctaaggagagagcattttgctttcaactcagaaaaa
cactggggtcaaagaggagattatgatgaaagagaacatcagacctttcctgtatatggt
ggtctcaaagggttccaggaagctcgagacagataccggcaaacaaactacagatttgaa
attcgaagtggtcctacctggaacagaggacttgaacaagatgctcacagagactttgat
gaccgtcgtagaccatgggaaaggcaaagggacagggatgatagagattttaattttggt
agagaaatgaatggaaacagatttgggagagagagaacacagaacaactggataccccct
ccgcatccaagagtgtttgaatattttgaaggtggtgcttctcaacaaaaagttgatagt
gttccccaagttaatggtgaaaacacagagacggagaatcagccatctgctgtgcaagtg
caggatgaattggaactttatgaaaagttggcgacttcaaatgagacaaaaaaagagaag
agtgacacagaagctgaattagaaactgaaccagtggtagaaagcacagaaactgagggg
acataa
DBGET
integrated database retrieval system
