Protobothrops mucrosquamatus (Taiwan habu): 107294431
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Entry
107294431 CDS
T05763
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107294431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107294431
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107294431
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107294431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
107294431
NCBI-ProteinID:
XP_015679147
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHI
RMLETILRMLDNDSINVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEMFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKGLHNNHHQPPPTIPPSYPMGSSSSTSSFLGNGPGSNSNGAVAGSGNASSKANPP
AGHAPTTPTPYAQAVAPPPPSTNASQPRPPSTQQNASKQNGATSYSSVVADNSSDSTLSS
SNQSLPNQTTSHNPPSASTKEPSAAPQPSSVGNSTGSSLLVPLTANPPASPTPSFSDSKS
AQTLLNGPPQFSSTPEIKAPEPLSTLKSMAERAAISSSIEDPVPSLHLAERADILITSTT
SQPASNQPPIQLSEVNIPLSLGVCPLGPVPLIKEQLYQQAMEEAAWHHMPHPSDSERIRQ
YLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSW
RFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcagataagaggaagctacaaggtgagattgatcggtgtctcaaaaaggtatcagaa
ggtgtggagcagtttgaagatatctggcagaagctccataatgcagcgaatgccaatcag
aaggagaaatatgaagctgatctgaaaaaggagattaagaagctccagagattgagggac
cagatcaagacatgggttgcatccaatgagattaaagacaaaaggcagctaatagacaac
cggaaactcattgagacgcaaatggagcggttcaaggtagtggaacgtgagaccaagaca
aaagcctactccaaagaggggctgggcctcgcccagaaagtggacccagcccagaaggag
aaagaggaagttgggcagtggctgacgaatacaatagacaccttgaacatgcaggtggat
cagtttgagagcgaagtggagtcgctctcggtccagacgcgcaagaagaaaggagacaag
gataagcaagaccggatcgagggcctgaagcggcatattgagaagcatcggtaccacatc
cggatgctggagacaatcctgcgcatgctggacaatgactctatcaacgtggactctatc
cgcaaaatcaaggacgatgtggagtattacgttgattcttcgcaggaccccgattttgag
gagaatgagtttctctacgatgacctcgacttagaagacattccacaggcactggtagcc
acttccccacccagccatagccacatggaagatgagatgttcaaccaatccagcagcacc
cccacatcgaccacatccagctccccaatcccacccagccctgcaaactgcacaacggag
aactctgaagatgataagaaacgaggacggtcaacagacagtgaagtcagccaatcccca
gcaaagaacggttcaaaaggcctccacaataaccaccaccagcctcctcccaccatccct
cccagctacccaatgggcagcagctccagcacatcatccttcctggggaacgggcctggc
tccaatagcaacggggctgtcgcgggcagcgggaatgcaagcagcaaagccaaccctccg
gcagggcacgcaccgaccaccccaactccttatgcgcaggctgtggcgcccccgcccccc
agcaccaacgcctcacagcctcggcctcccagcacccagcagaacgccagcaagcagaac
ggtgcaaccagttacagctccgtggtagccgacaacagctcagattcgacactaagcagc
agcaaccagtcattgcctaaccagacaacgtcacacaatccacccagtgcttccacgaaa
gagcccagtgcagctcctcagccatcaagtgtcggcaacagcactggatccagcctcctg
gtgcctctgactgccaacccacctgcctcacccacacccagcttctccgacagcaaatct
gcccagacgttgctcaacgggccgccccagttcagctccacgcctgagatcaaggcgcct
gaacctctaagtacgttgaagtccatggctgagagggcagcgatcagttctagcatagaa
gaccccgtgccatctcttcacctggctgaaagggctgacatcttaattactagcacaaca
tctcagccagcctccaaccagccccccatccagctctcggaggtgaacatccccctttcc
ctcggggtgtgccctctggggcccgtgcctctcattaaggagcagctctaccaacaggcc
atggaagaggccgcctggcaccacatgcctcatccttctgattcggaaagaatccggcag
taccttcctcggaatccctgtccgactcctccataccaccaccagatgcctcctccacac
tccgacacggtggaattctaccagcgcctctccacagagactcttttcttcatcttctac
tatctggagggtacgaaggcacaatacctggcagcaaaggcactgaagaagcaatcgtgg
cgcttccatacgaagtacatgatgtggtttcagcggcatgaagaacctaagaccatcact
gatgagtttgagcagggcacttacatctactttgactacgagaaatggggccagcgcaaa
aaggagggtttcacctttgaataccgctacctggaagaccgggacctgcagtga
DBGET
integrated database retrieval system
