Protobothrops mucrosquamatus (Taiwan habu): 107294469
Help
Entry
107294469 CDS
T05763
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmur03009
]
107294469 (LTN1)
04121 Ubiquitin system [BR:
pmur04121
]
107294469 (LTN1)
Enzymes [BR:
pmur01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107294469 (LTN1)
Ribosome biogenesis [BR:
pmur03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107294469 (LTN1)
Ubiquitin system [BR:
pmur04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107294469 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
zf-ANAPC11
FANCL_C
HEAT_GCN1
zf-rbx1
RINGv
TPR_CcmH_CycH
zf-RING-like
MCM9_N
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
107294469
NCBI-ProteinID:
XP_015679189
LinkDB
All DBs
Position
Unknown
AA seq
1760 aa
AA seq
DB search
MGGKNKQRTKGNVRPSSSGRTAELLAKEQGTVPGFVGFGTSSSDLGYIPAIQGAEEIDTL
IDADFRMVLRKLSKRDVTTKLKAMQEFGIMCKERETEIVKGVLPYWPRIYCKISLDHDRR
VREATQQAFEQLILKVRKHLAPHLKNIMGYWLIAQCDIYSPAASAAKEAFEKAFPPSKQS
EALVFCKDEILNVLQDHLLKETPDTLSDPQAVPEEEREGKFHRVITSSLLSLKKLLCMMP
NNEIKSLEERLKTLLSQNKFWKYGKHNIAQVRSAFFEVISTFCQHIPESMNAEASRVCPA
VLLSIDDSDAIVCLALWEAVLHVLTTIEDCWSHVNAKKGVLPKLWTVLQEGGRGLATIIY
PNILPFISKVPHNVADPKLNYSTTFFTSIINGLFTERAMVCRSESSAIVSTFMECLQFTV
LQNIGEEEEEVKIQEMLINIQLIPLIDTVIKEPKLQNGPLFYELADMLNVWKTKAEITND
DRTTLTFQRMLSNFWDGLSNICVGHVAVMDADEKSLAAMSSLLQILQNPENKMKKNRKKV
VNVRFAEDRKAEINTERENFVDLRTSNESSNVIHEIHGKHVFPLQNESLEALVCKLAVLS
IGYTSQQTSDQHLKFLSALLSNFASRKVFQVLVEERNDVQYENPSIQFLHEKLIVWLKED
WRKETDFLIDILYSILHCCSSPIERENILNDLTKMNLKWSILLQIIQKACSSSEKHSLSS
TWLKGDVLGEKLVTLADDLCNISLKMTVTSAESFHSEQWTLLSLVLSQLIKNESLIGEVY
VKRIIDKLQAALSKAKDLSEAGNTELSVSFICDIASSFFTSVKGCLMMPSSEDLLFTIFQ
LCAQTQDITRLSDFLINKLKHTWMCGITSLVHQRSILHKESSFLQKSAFWVKNQLQTSVL
DIKSLQVLISVVNDLLTTLLEAEDVSACVLKDYIEWLTPSQTEWEKMRESLSSEWLRKPL
LEGRLSINCELPGIDNTFSIPAKLPSHLCTAALLSRMALLILEKEVVFENPEVERRKIDN
IIVEQLYALQWIEELANPSDLLLEFLHDSEVMKISHENFYLLNNISHLLQILLNRSKESG
QLWALTMAKLINTKNFPPYEIKALFDSPESFFPLTEGNLHTLQSLSPFLPEEDKEELVIR
FTAKLMTCNGTDLFSTEGAFGYLGILNSCLNTQDTDYGELMAGILKVIVSWRNDYEDSFL
FSCNLQEANPQLLSLNIEMIRFISLLLKKPLSLLESEWDFVMCSMLAWLETTCENPEVFP
ATQVQAFASVSCDLSASLSAYFQAATPEIVEEFPENLMSEWQDFFSEGIHSLLLPLLAKI
TRKEQDAVETSFQNSLVKSLGKALTYISKDQLLNHRLPAKFVAGQKTNLPDNLQTLLNTF
SPLLLFRARPVQIAVYHMLNKLMSDLPKFDNVDLRSYGDEEEELLLSPPAALMTVLTTQE
DLLENILECIPVGEFAEIQPMSDEFCLILGYLLTWKLILSFFKGASSQLRALYSQYLRRT
KSLNKLLYHLFRLMPENPTFPGSTSELLNKDIKTYFTEELDLDIKDTLAMSSHIPHLACT
VYCMTLKDLPAMVRLWWNSCEKRVFNIVDKFTSKYVSGILSSQEISSVQTSTQLFNGMTV
KARSATREVIATYSVDDIFIELIIQLPPNYPLGSIAVESGKRVGVAVQQWRNWMLQLSTY
LTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGSNYSLPKKACRTCKKKFHSACL
YKWFTSSNKSTCPLCRETFF
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcaagaacaagcagcgaactaagggcaacgtacggccttctagcagtggaaga
acagctgaacttctagctaaagaacaaggaactgttcctggatttgttggctttggcacc
tcttcaagtgacctgggatacattcctgcaattcagggagctgaagaaatagataccctt
atagatgctgattttcgtatggtgctaagaaaactttccaaaagagatgtcacaaccaag
ttaaaagctatgcaagaatttgggataatgtgcaaagaaagagagacggagattgttaaa
ggagttctaccgtactggcctagaatctattgtaaaatttctcttgatcatgatcgccga
gtccgggaagcaacacagcaagcttttgaacagcttattctgaaagtcagaaaacattta
gctcctcatttaaaaaacattatgggatattggcttatagctcagtgtgatatttactct
ccagcagcatcagcagcaaaagaggcatttgaaaaggcctttccaccaagcaaacaatct
gaagccttagtgttttgtaaagatgaaattttaaatgtattacaagatcatcttttgaaa
gaaactcctgatacactaagtgatccacaagcagttccagaagaagaaagagaaggcaaa
tttcatcgagttataacttcttctttgttatctttaaagaaattgctttgtatgatgccc
aataatgaaattaaatcattggaagagaggctaaagacactgctctctcaaaacaaattt
tggaagtacgggaaacataacatagcacaggttcgttctgctttctttgaggtgattagt
accttttgtcagcacattcctgagtccatgaatgcagaagcatcaagagtgtgtccagcc
gttctccttagcattgatgatagtgatgctattgtatgccttgctctttgggaagctgta
cttcatgttcttactactattgaggattgctggagtcacgtgaatgcaaaaaaaggagtt
ctaccaaaattatggacagtgcttcaagaaggaggaaggggacttgctactattatatat
cctaatatcttgccatttattagcaaggtgcctcataacgttgcagatccaaagttgaac
tattcaacaacattcttcacctctataattaacgggctattcactgaaagagcgatggtt
tgtcgttcagaatcttcagcaatcgtatcaacttttatggagtgtttacagtttacagtc
ctacagaatattggcgaagaagaagaagaagttaaaatacaagaaatgcttataaatatc
cagttaattcctctcattgatacagtaattaaagagcccaagttacaaaatggacctttg
ttttatgagctagcagacatgctgaatgtttggaaaacaaaagcagaaataactaatgat
gatagaacaaccctcacttttcagagaatgttatctaacttttgggatggcctttcaaat
atatgtgtgggacatgttgctgtaatggacgcagatgagaaatcgctggctgccatgtct
tctttgttgcaaattctgcagaacccagaaaacaagatgaaaaaaaataggaaaaaagtt
gtaaatgtaagatttgcagaagacagaaaagctgaaattaacaccgaacgtgagaatttt
gttgacttgagaactagcaatgaatccagtaatgttattcatgaaattcatgggaaacat
gtttttcctctacagaatgaatctttagaagctttagtttgtaaacttgcagtattaagt
atagggtacaccagtcaacagacatctgaccaacacttaaagttcctctctgctctgctc
agcaactttgcttctcgtaaagttttccaggtgcttgtagaagaaagaaacgatgttcaa
tatgaaaatccatctattcagtttctgcatgaaaagttaattgtttggctgaaagaagat
tggagaaaagagacagacttcctgattgatattttatatagcattctccattgctgcagc
agtcccatagagagggaaaatattctcaatgatttaacaaagatgaatctaaaatggagt
attcttcttcaaataatccaaaaggcctgttcaagctctgagaaacattccttaagttct
acatggctaaaaggagatgtactaggtgagaagcttgtgactttggccgatgatctatgt
aacatcagcttgaagatgacagtaacttcagccgaatcatttcattcagaacaatggact
ctcctaagcttggtattatcccagttaattaaaaatgagtccttaattggtgaagtttat
gttaaaaggataattgacaaacttcaagccgctctctcaaaagctaaggatctttcagaa
gctggaaatacagaactatcagtgtctttcatctgtgacatagcctccagttttttcact
tcggttaaaggatgtttaatgatgccatcctctgaagatttgttattcactattttccag
ttatgtgcacagacccaggatataacacgtttatcagatttccttataaataaattaaag
catacttggatgtgtggcatcacttcacttgtgcatcagcgtagcattctgcataaggag
agcagcttcctacagaaatctgccttctgggttaagaaccagcttcagacatcagtgttg
gatataaaaagtttgcaggttttgatctctgtggtcaatgatttgttgactacattgcta
gaagctgaagacgtttctgcttgtgttctgaaagattatattgaatggcttactccaagt
cagactgaatgggaaaagatgcgggagtctctgtccagtgagtggttgaggaaacccctt
ctggaaggaagactaagtattaattgtgaattacctggaatagataatacattttctatc
ccagctaaacttccaagccatctttgtactgcagctctgcttagtagaatggcattattg
atactggaaaaggaagttgtgtttgaaaatcctgaagtagaaagaagaaaaattgataat
atcattgtagaacagctgtatgccttacagtggattgaagaattagcaaacccatctgat
ctgctacttgaatttcttcatgatagtgaagtaatgaaaatttcacatgaaaatttctat
ctactcaataatatttcccatcttttacaaatattgttgaatagatcaaaagagagtgga
caactttgggctttaacaatggctaaattgataaatacaaaaaactttccaccctatgag
attaaagcactttttgattcacctgagagctttttcccattaactgaagggaacctgcat
acgcttcagagtctgtctccatttttacctgaggaagataaggaagaacttgtcattagg
tttacagctaaactaatgacttgtaatggaactgatctcttcagtactgaaggagcattt
ggatatctcggcattttaaattcctgcttgaatactcaagatactgattatggagaacta
atggctggaatattgaaggtcatagtatcttggcgcaatgattatgaagatagttttctt
ttcagctgcaatctacaagaagcaaatccacagctgcttagtttaaatatagaaatgatc
cgtttcatttctctgttgctgaagaagcctctctctttattggagagtgaatgggatttt
gtcatgtgctccatgctagcatggttggagacaacctgtgaaaacccagaagtttttcct
gccacacaggtacaagcctttgcttctgtcagctgtgacctgagtgcttctctaagtgca
tactttcaggcagcaactcctgaaatcgttgaagaatttccagaaaatctcatgtctgaa
tggcaggacttcttttcggaaggcattcatagcttgcttctgcctctgttggcaaaaatc
accagaaaagaacaagatgcagtggaaacatcatttcagaactctttggtgaaatccttg
ggcaaagctttaacatatatatcaaaggatcagttactgaaccacaggcttcctgccaaa
tttgttgctggtcagaaaacaaatctccctgacaatctacagactttgttaaatactttt
tctccattactactcttcagagctagacctgttcaaattgcagtgtaccacatgctaaac
aagttaatgtctgatttacctaaatttgacaacgtggatctcaggtcttatggtgatgaa
gaggaggaactattattatccccaccagcagcacttatgactgttcttaccactcaggaa
gatttactagaaaacatcctagaatgcattccagttggagaatttgcagaaattcagcca
atgagtgatgagttttgtcttattttaggatatcttcttacctggaaattaattctatct
ttcttcaaaggagcttcttcccagcttcgagctctttattcacaataccttcgaagaact
aagagtttgaataaactattgtatcacttgttcaggcttatgccggaaaacccaactttt
cctggatcaacatcagaacttttaaataaagatataaaaacatatttcactgaagagctt
gatttagatatcaaagacacactagcaatgtcctcacacattccacatttggcttgtact
gtctattgtatgaccttaaaagatttgccagctatggttcgtctttggtggaacagctgc
gagaagcgagtcttcaacattgttgataaatttacaagcaaatatgttagtggtatactg
tcttcccaagaaatatcttctgtacagaccagtacccagttgtttaatggcatgacggta
aaagctcgatctgctactcgagaagtcattgctacttactcagttgatgatatattcatt
gaactgattatacagcttcccccaaattatcctttgggctccatagctgtagagagtggg
aaaagggttggtgtagcagttcagcaatggcgcaattggatgctgcagcttagcacttat
ctcactcatcagaatggaagcattatggaagggctagcattgtggaaaaacaatgtggat
aaacgatttgagggtgttgaagattgtatgatctgtttctcagttatacacggttccaat
tactcccttcccaaaaaagcttgcagaacatgcaagaaaaagttccattcagcctgtctg
tacaaatggtttacatctagcaacaaatccacttgccctctttgtcgagagactttcttc
tga
DBGET
integrated database retrieval system
