Protobothrops mucrosquamatus (Taiwan habu): 107294744
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Entry
107294744 CDS
T05763
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107294744 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmur03041
]
107294744 (PRPF38B)
Spliceosome [BR:
pmur03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
107294744 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
107294744 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
107294744
NCBI-ProteinID:
XP_015679489
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MANNCPLVGPGNCHPLPPPHQHQHQQQHQGILLQQQQQAGAVLSPPLALQSAGPKPAASG
KQGNALPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIFFKVNHVEPWEK
GSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHIDSPYIRALG
FMYIRYTQPPKDLWDWFESFLDDEEDLDVKAGGGCMMTIGEMLRSFLTKLEWFSTLFPRI
PVPVQKNIDQQIKARPRKIKKDGKEGVEEVDRHAERRRSRSPRRSLSPRRSPRRSRSRSH
HREGRGSSSFDRELERERERQRLEREAKERERERRRSRSADRASERRRSRERHRSRSRDR
KGDRREREKENERNKRKERDHDKERGVERERDRSRERDHSREKSKDRKGKSEGDERRHKD
EKDERKHKDEKRDAKKERRHSRSRSRDRKHRSRSISRNASKHSRSGSKDKSSKHKSGSKE
KSNKQSRSRSRGRTDSSEKSRKRDRSPSKERSRKRSKSKERSHRYDHSDKDHSDKRDQRS
QSTEQENQEKQSKNKDETV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggccaataactgccccctcgtgggcccgggcaactgccatccgctgccgccgccgcac
cagcaccagcaccagcagcagcaccaggggatcctcctgcagcagcagcagcaggccggc
gccgttttgtcgcccccgttagcgctccagagcgccgggcccaagccagccgcctcgggc
aagcaaggcaacgctttgcctctgtgggggaatgaaaagaccatgaacctaaaccccatg
atcctcaccaacatcctctcgtccccttacttcaaggtgcagctttacgagctgaagacc
taccacgaggtggtcgacgagatctttttcaaggttaaccatgttgagccttgggagaag
ggaagcagaaaaactgcaggtcaaacagggatgtgcggaggggtgcgaggagttggaact
ggaggtatagtgtctacagccttttgcctcttgtacaagttatttactttgaagcttacc
cgtaagcaagtgatgggactaataactcatatagattccccatacattagggcccttgga
ttcatgtatattaggtacacacaacctccaaaagatttatgggactggtttgaatccttt
ctcgatgatgaggaggaccttgatgtgaaagcaggtggcggctgcatgatgaccattgga
gaaatgctgcgctcttttcttactaagcttgaatggttttctacattattcccgaggatt
cctgtaccggtgcaaaagaacattgatcaacaaattaaagccagacctagaaaaatcaag
aaggatggcaaagagggcgtagaagaagtagacaggcacgcagagcgtagacgttcaagg
tctccaagaagatccttgagtcctaggaggtcacctagaagatcaagaagcagaagtcat
catcgggaaggacgtggttcatccagttttgatagagaattggaaagggaaagagagcga
caaagattagagcgtgaagctaaggagagagagagggaaaggcgacggtctcgaagtgct
gatcgggcatcggaacgtaggcgaagtcgcgaaaggcacagaagtcgcagccgtgaccga
aaaggagacagaagagagagagagaaagaaaacgaaaggaataaaaggaaggagcgtgac
catgacaaagagagaggtgttgaaagagaacgagatcgctctagagagagagatcattct
agagaaaaatcaaaagacagaaaaggtaaaagtgaaggagatgaaaggaggcacaaagat
gaaaaagatgaaaggaagcataaagatgaaaaaagagatgccaaaaaagagaggaggcat
agccggagtcgaagtagggatcgtaagcataggagcagaagtataagcagaaatgctagc
aagcatagtagaagcgggagtaaagacaagtcaagtaaacataaaagtggaagtaaagag
aaatcaaataagcagagcagaagccgaagcagaggaagaactgatagcagtgaaaagtct
cgaaaacgagaccgtagtcctagtaaagaaagatcacgaaaacgtagcaaaagcaaagaa
cgttcccacagatacgaccacagcgataaggaccactcagataaacgcgatcagaggagc
caaagtacagaacaagagaatcaagaaaaacaatctaaaaacaaagatgagactgtataa
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