Protobothrops mucrosquamatus (Taiwan habu): 107294746
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Entry
107294746 CDS
T05763
Symbol
SDC1
Name
(RefSeq) syndecan-1 isoform X1
KO
K06257
syndecan 1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04512
ECM-receptor interaction
pmur04514
Cell adhesion molecules
pmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107294746 (SDC1)
04514 Cell adhesion molecules
107294746 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107294746 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmur04131
]
107294746 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pmur04090
]
107294746 (SDC1)
00535 Proteoglycans [BR:
pmur00535
]
107294746 (SDC1)
Membrane trafficking [BR:
pmur04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
107294746 (SDC1)
CD molecules [BR:
pmur04090
]
Proteins
107294746 (SDC1)
Proteoglycans [BR:
pmur00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
107294746 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
107294746
NCBI-ProteinID:
XP_015679488
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MRVSAIAGLSALVFCFQAVLAQSMDTSLPPEDQDSSGDDDDSFSGLSSGIGSSIEDEVIV
SNLPLQESTNTSLMPEVSTSLRDIQTKVQVTDSPVEDYSSAPVSIASIPGFPDTAVASKE
PPVTLEELDSTTEPDTTKPTVLTTSIPIAHHVSTARITTSRAASTVKFIDIHDMSNIDET
RSFGIVPENERNLNSVLPTMVSSTALMESSPLPENDIFQEYGSGGQEDFIFSTHEENQIN
VKDLEAENRMIDSETKNAKSEGLMDRKEVLGGVIAGGLVGLLFAGFLVAFMLYRMKKKDE
GSYSLDEPKQSNGGYQKPHKQEEFYA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcagcgcgatcgcggggctgagcgccttggtcttttgcttccaagcggtctta
gcgcaatcaatggacaccagtctaccccctgaagaccaggattcatctggagatgatgat
gattcattttctggtttatcatctggtataggttcttcgatagaggatgaagtgattgtc
tccaatcttccattacaagaaagcacaaatacctctctgatgcctgaggtttctaccagc
ttgagagatatccagacaaaggttcaagttacagatagtcctgtggaagattattcaagt
gcacctgtctctatagcaagtatacctgggtttccagatactgctgtcgcatccaaggag
ccaccagtaactcttgaagagttagactcaactacggagccagacacaacaaaacctact
gtattgacgacaagcatcccaatagcgcatcatgtttccacagccagaattacgacttct
cgtgctgctagcacagtcaaattcattgatattcatgacatgtctaatattgatgaaaca
cgctcatttggcattgtgccagaaaatgagagaaatttgaatagtgtcctacccactatg
gtgtcttctactgctctaatggaaagctctcctctgcctgaaaatgatatcttccaggaa
tatggttctggtggtcaggaagattttatattttcaacacacgaggaaaatcaaataaat
gtaaaggaccttgaagcagaaaatagaatgattgattcagaaacaaagaatgcaaaatct
gaaggattaatggacaggaaagaagtactaggaggagtcatcgctggtggactcgttggc
ttactatttgctggattcctagttgcattcatgctatatagaatgaagaaaaaagatgaa
ggaagttattcattggatgagccaaagcaatcgaatggaggctatcaaaaaccacataag
caagaagaattctatgcatga
DBGET
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