Protobothrops mucrosquamatus (Taiwan habu): 107294746
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Entry
107294746 CDS
T05763
Symbol
SDC1
Name
(RefSeq) syndecan-1 isoform X1
KO
K06257
syndecan 1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04512
ECM-receptor interaction
pmur04514
Cell adhesion molecule (CAM) interaction
pmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107294746 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
107294746 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107294746 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmur04131
]
107294746 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pmur04090
]
107294746 (SDC1)
00535 Proteoglycans [BR:
pmur00535
]
107294746 (SDC1)
Membrane trafficking [BR:
pmur04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
107294746 (SDC1)
CD molecules [BR:
pmur04090
]
Proteins
107294746 (SDC1)
Proteoglycans [BR:
pmur00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
107294746 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
107294746
NCBI-ProteinID:
XP_015679488
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MRVSAIAGLSALVFCFQAVLAQSMDTSLPPEDQDSSGDDDDSFSGLSSGIGSSIEDEVIV
SNLPLQESTNTSLMPEVSTSLRDIQTKVQVTDSPVEDYSSAPVSIASIPGFPDTAVASKE
PPVTLEELDSTTEPDTTKPTVLTTSIPIAHHVSTARITTSRAASTVKFIDIHDMSNIDET
RSFGIVPENERNLNSVLPTMVSSTALMESSPLPENDIFQEYGSGGQEDFIFSTHEENQIN
VKDLEAENRMIDSETKNAKSEGLMDRKEVLGGVIAGGLVGLLFAGFLVAFMLYRMKKKDE
GSYSLDEPKQSNGGYQKPHKQEEFYA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcagcgcgatcgcggggctgagcgccttggtcttttgcttccaagcggtctta
gcgcaatcaatggacaccagtctaccccctgaagaccaggattcatctggagatgatgat
gattcattttctggtttatcatctggtataggttcttcgatagaggatgaagtgattgtc
tccaatcttccattacaagaaagcacaaatacctctctgatgcctgaggtttctaccagc
ttgagagatatccagacaaaggttcaagttacagatagtcctgtggaagattattcaagt
gcacctgtctctatagcaagtatacctgggtttccagatactgctgtcgcatccaaggag
ccaccagtaactcttgaagagttagactcaactacggagccagacacaacaaaacctact
gtattgacgacaagcatcccaatagcgcatcatgtttccacagccagaattacgacttct
cgtgctgctagcacagtcaaattcattgatattcatgacatgtctaatattgatgaaaca
cgctcatttggcattgtgccagaaaatgagagaaatttgaatagtgtcctacccactatg
gtgtcttctactgctctaatggaaagctctcctctgcctgaaaatgatatcttccaggaa
tatggttctggtggtcaggaagattttatattttcaacacacgaggaaaatcaaataaat
gtaaaggaccttgaagcagaaaatagaatgattgattcagaaacaaagaatgcaaaatct
gaaggattaatggacaggaaagaagtactaggaggagtcatcgctggtggactcgttggc
ttactatttgctggattcctagttgcattcatgctatatagaatgaagaaaaaagatgaa
ggaagttattcattggatgagccaaagcaatcgaatggaggctatcaaaaaccacataag
caagaagaattctatgcatga
DBGET
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