Protobothrops mucrosquamatus (Taiwan habu): 107294836
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Entry
107294836 CDS
T05763
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmur03036
]
107294836 (HFM1)
Enzymes [BR:
pmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107294836 (HFM1)
Chromosome and associated proteins [BR:
pmur03036
]
Eukaryotic type
Meiosis-specific proteins
Others
107294836 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
107294836
NCBI-ProteinID:
XP_029141554
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MTHTQDSDSESELEEAAPAGHLECQPQEIPNQESHEADQTPASPKSLEQSNDNDIKSPRP
EPNNASGKIEMDTYCNIIKNKEMKKDLWKNNVQKVQNSDFNYLSINNIFSASTNTKEIKK
APRILENSSMEVVSKNDSVILRPVTEIPSQFRNIFKEFPYFNYIQSKALDDLLYTDRNFV
ICAPTGSGKTVMFELAVTRLLIKVPIPWLNIKIVYMAPIKALCSQRFDDWKLKFGPIGLI
CKELTGDTAVDDLFEIQHAHIILTTPEKWDSMTRKWRDNSLVQLVRLILIDEVHVVKDES
RGATLEVVVSRMKTIQSSFSQSSDNPSSVFPMRFVAVSATIPNAEDIAEWLSDGKRPAVC
LKIDERHRPVKLHKVVLGFPCSSNQTAFKFDLTLNYKVASVIQTYSEQKPALVFCATRKG
VQQAASVLAKDAKFIMTIEQKQRLQRSANLIKEAKLRDLLICGVAYHHAGVEMSDRKTIE
TAFNMGDIPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFQEYSETDILQMIGRAGRPQ
FDTTATAVIMTRLSTRDKYVHMLNGADTIESSLHKHLIEHLNAEIVLHTITDVNIALEWV
RSTFLYIRALKNPAYYGFSAGLDRNGIEAKLQELCLKNLNDLSSLDLIKMDDNLYFKTTE
TGRQMAWYYIAFDTVKKCFMINGTVTLSELVVLISGCSEFSDIKLRTNEKKVLNSLNKDK
KWMNIRYPMEGKIKTREMKVNCLIQAQLGCIPIQDFTLTQDIGNIFRNGIRLTKWLSEFL
ATRQNNFIVLLNALILAKCFRCRLWENSLYISKQLEKIGMTLSNTMMNAGLTSFKKIEDI
NARELELILNRHPPFGNQIKESVVHLPKYELNIEQLVKYNEAVAEIIVTIILTNFEQLQI
KRTAPDSHYATLVIGDNDNNVIFRQRIMDSALLKTGNWTKKIEVRRAVNSDELNINLISS
EYVGLDVQQKYKPFYLGPKKVGIMITRGKPDSSQTSSDSQMNFLVIALLNTVGFNLLFFP
FMSSNYHKTKEATCSQESVSIKNGNRKCNHHCKNKETCGHDCCKIGVSEKSNMKNESVFS
SYLTDLRNRNAESAIPPVKRLKMQMSNKSQKVDLKQFSYIPKAFLPALPRLEHVQHPRSP
LAEDIYSSDVSQRFQLEPEVRKMNGFFAIKQSEENNNPIMSSNKSLEESSMSNLTDADKS
ISLFSETLNINFELGNEIWNDYDDGSFVHGNPFTANIQKLKDPESSPLESRNMCMQNLRK
NSSFCQNTQNKPPGALVLQESGTPTNRKAKSFIEVEGYRKKILRFEFVEVNCSSYDAKYI
YLFWWGFVLQFRLQEEYNPPENLKMAQLTANSETALRSYQIDGKGDFFITSRNMTKGADL
RQQLEDDGDIKPFLGIFDGLF
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgacccacactcaggattcagattctgaatctgaattggaagaagctgctccagctggg
catctggaatgtcagcctcaggagataccaaatcaagaatcacacgaggctgatcaaaca
ccggcatcacccaaatcgttggaacagtcaaatgacaatgacataaagtctcccaggcct
gaacccaataatgccagtggaaagatagaaatggatacatattgcaatattattaaaaac
aaagagatgaaaaaagacttatggaaaaataatgtgcagaaagtccaaaactcagatttt
aattatctttctataaataatattttttctgcttctacaaatacaaaggaaattaaaaaa
gcaccacgtattttagagaactctagtatggaagtggtatctaaaaatgactccgtgatt
ttgaggcctgtgactgaaatcccctctcaatttagaaatattttcaaagaattcccttat
tttaattatattcaatctaaggctttggacgatcttctttacacagacagaaattttgta
atctgcgcaccaactggttctggaaaaactgtaatgttcgagcttgcagttaccagatta
ttaatcaaggtgccaataccttggttaaatattaaaattgtatatatggctccaataaaa
gctctctgcagtcagcgctttgatgattggaaattaaaatttggacccattggactcatc
tgtaaggagctaacaggagatacagcagtggatgacttatttgaaatacaacatgctcac
attattttgaccacaccagaaaagtgggatagcatgactagaaaatggagagataactct
ttagttcagctagtgagacttatcctcattgatgaggtacatgttgtaaaagatgagagc
cggggtgctactcttgaagttgtggtcagccggatgaaaactattcagtcttctttctca
caaagttctgacaatcctagctcagtatttcccatgagatttgtggcagtttctgcaacg
attccaaatgcagaagatattgcagaatggctttcagatggcaagaggcctgctgtatgc
ctgaaaatagatgaaagacaccgtccagtgaagcttcacaaagttgtgcttggatttccc
tgcagtagcaatcaaactgcattcaaatttgacttaacacttaactataaagtagctagt
gttattcaaacatattctgaacaaaagccagcacttgtgttctgtgccacaaggaaagga
gttcagcaagctgcttctgtactggcaaaagatgctaaatttattatgactatagaacaa
aaacaaagattacaaagatctgcaaatttaataaaagaagccaagcttagggatctctta
atttgtggagttgcttatcatcatgctggagtagaaatgtctgatagaaaaacaattgaa
acagcttttaatatgggagatataccagttctttttactactagtacacttgccatggga
gtaaatttaccagcacacctggtagttataaaatcaacaatgcattatgctggaggaatg
tttcaagagtacagtgaaactgatattttgcaaatgattgggagagcaggaagacctcaa
tttgatacaacagcaacagcagttatcatgacaaggctaagtacaagagacaagtatgtt
catatgttaaatggtgcagatacaatagaaagcagtttgcacaaacatctaattgagcac
ttaaatgctgaaatagtgcttcacaccatcactgatgtgaacatagctttagaatgggtg
agatcaactttcctctatatcagagctttgaagaatccagcttattatgggttttcagct
ggacttgacagaaatggaattgaagcaaaattacaagaactgtgtttgaagaatttgaat
gatttgtcatcgcttgatttgatcaaaatggatgataatctctatttcaaaaccacagaa
actggacgacagatggcttggtattatattgcatttgatactgtaaaaaagtgtttcatg
attaatggaacagtaactttatctgaactggttgtattgatatctggttgcagtgaattt
tcagacatcaagttaagaacaaatgagaaaaaagtactgaattccttgaacaaagataaa
aagtggatgaacataagatatccaatggaaggaaaaataaaaacaagagaaatgaaagta
aactgtcttattcaggcacagttaggatgcattcccatccaagatttcaccttgacgcaa
gatataggaaacatttttagaaatggcataagacttacaaaatggttatctgaatttctg
gctacccgtcaaaacaactttattgtattattaaatgctttgattttagcaaagtgcttc
agatgtagactttgggaaaattcactctatatatccaagcagctagaaaaaattggcatg
actttatcaaacacaatgatgaatgcaggactgacctcctttaaaaaaatagaagatata
aatgcaagagagcttgaattgattttgaacagacatcctccttttggaaatcaaattaaa
gaatcagtagtacatcttccaaaatatgaacttaacatagagcagctggtaaagtacaac
gaagcagtagctgaaatcatagtgacaatcatattaaccaactttgaacagctgcagata
aaaagaactgctccagattctcattatgcaaccctagtaataggagataatgataataat
gtgatttttagacaaaggattatggattctgctttgctgaaaactggaaactggacaaaa
aagattgaagtgagaagagctgttaattctgatgagcttaatataaatctaatcagttct
gaatatgttggactggatgttcagcagaaatataaaccattttacttaggaccaaagaag
gttggaattatgatcactcgtggaaaacctgatagctctcaaacttcttcggattctcag
atgaattttctagtgatagccttattgaacacagtgggatttaatttgctttttttccct
tttatgtcatcaaactatcataaaacaaaagaagccacttgtagccaagaatcagtaagc
ataaagaatggaaatagaaaatgcaatcaccactgcaaaaataaagaaacatgtggacat
gactgttgtaaaattggagtttcagagaaatcgaacatgaagaatgagtcagttttttct
tcatatcttactgacttaagaaaccggaatgctgaatctgccattcccccagtcaagcga
ctaaagatgcagatgtcaaataaatctcaaaaagttgatcttaaacaatttagttatatt
ccaaaagcttttcttccagcattgccaagattagagcatgtacaacatccaagatcccct
ttagcagaagacatctacagttctgatgtttctcaaagatttcaactggaacctgaagtt
cgcaaaatgaatggtttctttgctatcaagcagtctgaggaaaacaataacccgataatg
agctcaaacaaaagtcttgaagaatcttcaatgagcaacttgactgatgcagataaaagc
atctctttgttttctgaaactttgaatataaattttgaattaggaaatgaaatttggaat
gattatgatgatgggagttttgtacatggcaacccttttactgctaatattcagaagtta
aaagatccagaatcttctccgctggaatccagaaacatgtgcatgcagaatttgagaaaa
aactcatcattttgccaaaatactcagaataaacctcctggggccctggttttacaagaa
agtggaacgccaaccaataggaaagcaaagagttttatagaagttgagggctaccggaag
aaaatcctaagatttgaatttgttgaagtaaattgttcatcatatgatgctaaatatatc
tacttgttttggtggggttttgtgttacagtttagacttcaagaagaatataatccacca
gaaaatctgaaaatggcacaattaactgcaaactcagaaacagccttgagatcttaccaa
attgatggaaagggagacttttttattaccagcagaaatatgacaaagggggctgatctt
aggcaacagcttgaggacgatggtgatattaagccttttcttggcatatttgatggcctt
ttctaa
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