Protobothrops mucrosquamatus (Taiwan habu): 107295005
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Entry
107295005 CDS
T05763
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107295005 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmur03041
]
107295005 (DDX46)
Enzymes [BR:
pmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107295005 (DDX46)
Spliceosome [BR:
pmur03041
]
Complex A
U2 snRNP components
U2 related factors
107295005 (DDX46)
Complex B
107295005 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
107295005
NCBI-ProteinID:
XP_015679781
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MGRESRSTKQQLSKQKQHYRKRSSSRGRSGSRSRSRSPSDKRAKRGDDRRSRSRDRDRRR
ERSRSRDKRRSRSRDRKRVRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPGK
SKKVENRSRSTEKTEGVEVNKDKKKEKEDKEEEKDKDVNNFDQNKLEEEMRKRKERVEKW
REEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDDEETAEGEKEGNEIEDEELDPLDA
YMEEVKEEVKKFNMRSVKGGAGSEKKSGPTVTKVVTVVKTKKASPETEKKKGELMVNDQD
AMEYSSEEEEVDLQTALTGYQTKHRKLLEPVDHGKIEYESYRKNFYVEVPELAKMTLEEV
NAYRLEMEGITVKGKGCPKPIKTWVQCGISMKILNSMKKHGYEKPTPIQAQAIPAIMSGR
DLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSK
TLGVRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDE
ADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVC
SDVEQTVIVIEEENKFLKLLELLGHNQEKGAVIIFVDKQEHADGLLKDLMRASYPCLSLH
GGIDQYDRDSIINDFKSGVCKLLVATSVAARGLDVKQLVLVINYSCPNHYEDYVHRAGRT
GRAGNKGFAYTFITEDQARYAGDIIKALELSGATVPQELEKLWMDFKDQQKAEGKTIKKS
SGFSGKGFKFDETEEALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDM
ASSGGSSNVPAPTAGNAEKLEIAKRLALRINAQKNLGAEAQVLVSFQFKDVMQQATNAIL
RGGTIQAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQEGGQNESFKRYEEELEINDF
PQTARWKVTSKEALHRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKA
KAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgggaatcgagatcaacaaagcaacagttgtccaaacaaaaacagcattatcgg
aagcgctcctcatcacgagggcgctctggtagccgttcccgcagtcgttctccatctgac
aaaagagcaaaacgtggagatgacaggcgctctaggagtcgagacagagaccgcaggcgt
gagagatcgcggagcagggacaagaggaggtctcgatcacgtgacagaaaacgggtgagg
cgctcaagaagtagagagagggaaaggagtagagagagaagacgatcacgcagccgggag
agaagacgatctagaagccgaagcagaggcagacggtctcgatcttccagtcctggcaag
agcaagaaagtagaaaacagatcacgctctacagaaaagacagaaggtgtggaagttaac
aaagacaagaaaaaagagaaagaggacaaggaagaagaaaaagataaagatgtaaataat
tttgatcaaaataaattggaagaggaaatgagaaaacgaaaagaacgagtagaaaaatgg
agagaagagcagcgcaagaaagctatggaaaatataggagaactgaagaaagaaattgaa
gagatgaagcaggggaagaaatggagtttagaagatgatgatgatgacgatgaagaaact
gcagaaggagaaaaagaaggtaatgaaattgaagatgaagagttagatccactagatgca
tatatggaagaagtaaaagaagaggtcaagaagtttaatatgagaagtgtaaaaggtgga
gctggaagtgaaaagaaatcgggtccaacagttacaaaagtagtaactgtagtgaaaacc
aaaaaagcttctccagagactgaaaagaagaaaggagaactcatggtgaatgatcaggat
gcaatggagtattcctctgaagaggaggaagttgatctccagactgcactgacaggttac
caaacaaaacataggaaattgctggaaccagtggatcatgggaagattgaatatgagtct
tacaggaaaaatttctatgttgaagttcctgagctagccaaaatgactctggaagaggta
aatgcatacagactggaaatggaaggaattacagtcaagggtaaaggatgtcctaagccg
atcaaaacctgggtccaatgtggtatttctatgaaaatcctgaattccatgaaaaaacat
ggctatgaaaagcccacccctattcaggcccaagctatacctgcaattatgagtggacgt
gatttaattggcattgctaaaacaggaagtggaaagactattgcatttctgctgcccatg
ttcagacacatcatggatcagagatcattagaagaaggcgaaggtccaatagctgtcatt
atgacacctactcgagaactagctctacagattacaaaggagtgtaagaaattctcaaag
acccttggggttagagtcgtatgtgtatatggaggaacgggaataagtgaacagattgct
gaactgaaaaggggtgcggaaataatagtttgcacacctggccgtatgattgatatgtta
gcagctaataatggtcgggtgacaaaccttcggagagtgacatacgttgtccttgatgaa
gcagatagaatgtttgacatgggctttgagcctcaggttatgcgcattgtagacaatgtg
agacctgatcgccagaccgtgatgttttctgctactttccctagagcgatggaggcttta
gctcgccgtattctcagcaaaccaattgaggtccaagttggtggacggagtgttgtctgt
tcagatgttgaacagacagtgattgtcatagaagaagagaacaaattcttgaaattgctt
gagctactaggacataatcaggaaaaaggagctgtcattatatttgtggataaacaggaa
catgctgatggattgctgaaagacttgatgagagcttcttacccctgtctttcacttcat
ggaggtattgaccaatatgacagagacagcataatcaatgattttaagagtggagtatgc
aaactgcttgtggctacatcggtagcagctcgaggtcttgatgtaaaacaacttgtgctt
gtaatcaactacagttgtcctaatcattatgaagattatgtgcacagggcaggcagaact
gggcgtgcaggcaacaaaggttttgcctataccttcataaccgaagatcaagcacggtat
gctggtgatataattaaagctttggagttgtcaggtgccacagtgcctcaagagctagag
aaactttggatggatttcaaagatcagcagaaagctgagggaaaaacaattaaaaagagt
agcggcttctccggtaaaggattcaagtttgatgaaacagaagaagctttggctaatgag
cggaagaagttacaaaaagcggcacttggcttgcaggattcagatgatgaagatacagcg
gttgatattgacgagcagattgaaagcatgttcaattcaaagaaaagagtgaaggacatg
gcatcatctggtggttcatctaatgttcctgccccaacagcaggaaatgcagagaaatta
gaaattgctaagagattggcattgagaatcaatgcacagaagaatcttggagccgaggca
caagtattggtctcttttcaatttaaggatgtgatgcagcaagctacaaacgctatcctg
aggggtggcacaattcaggctccaacagtttctgcaaaaactattgcggagcaactcgct
gagaagatcaatgccaaactcaattatgtacccatagaaaaacaagaggaggagaagcag
gagggcggacaaaatgaatcttttaagagatatgaggaagaactggagatcaatgatttc
cctcagactgctagatggaaagtgacttcaaaggaagcactgcacagaataagtgaatat
tctgaagctgccattacaatcagaggaacctattttcctccaggcaaagaacccaaggag
ggggaaagaaaaatttacttggctattgagagtgccaacgaattggctgttcagaaagca
aaggcagaaatcaccaggcttatcaaagaagagcttatccgattgcaaaattcataccaa
ccaaccaacaaaggaagatacaaagttttataa
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