KEGG   Protobothrops mucrosquamatus (Taiwan habu): 107295105
Entry
107295105         CDS       T05763                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pmur  Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pmur00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107295105 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmur03021]
    107295105 (TAF5L)
   03036 Chromosome and associated proteins [BR:pmur03036]
    107295105 (TAF5L)
Transcription machinery [BR:pmur03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107295105 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     107295105 (TAF5L)
Chromosome and associated proteins [BR:pmur03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     107295105 (TAF5L)
    STAGA complex
     107295105 (TAF5L)
    TFTC complex
     107295105 (TAF5L)
    SAGA complex
     107295105 (TAF5L)
    SLIK complex
     107295105 (TAF5L)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR19_1st PEP5_VPS11_N PROPPIN Ge1_WD40 WD_LRWD1 eIF2A Mala_s_1-like Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 107295105
NCBI-ProteinID: XP_015679885
LinkDB
Position
Unknown
AA seq 589 aa
MKRVRTEQIQMAVSCYVKRRQYVDSEGPLKQGLRLCHTAEEMAANLTVQSESGCTNVISA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSQEVVPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTLTIQDILSNFKLRAFLDNKYVIRLQEDSYNFLLRYLQ
SDNNSALCKVLSLHIHLDVQPAKRVDYQLYASGGSSRSESNGLEPTDMPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRPK
KLKSEPHLVDISRIHLACDILDEEAEDDDDVGTEMKLLRGHSGPVYSTSFLSDSSGLLSC
SEDTTIRYWDLGCFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLR
IYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNTVRLFPGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPVDGSSSELVGVYTGQINNVLSVQFMACNLLLVTGIAQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgtgtacgcaccgaacagattcagatggctgtttcctgctatgtcaagcgcagg
cagtacgtagactcagaaggtcctctgaaacaagggttgcgcttatgccacacagccgaa
gaaatggcagctaatctaacagtacaatctgaatcgggttgtacaaatgtgatttctgct
gcgccctgcttagcagagccccaacaatatgaagtacagtttgggcggttgcggaacttt
ctgacagattcagattcccagcatagccaggaagtggtgcctctcctgtaccctctcttt
gtctacctccatctcaacatggtccaaaatggcctaaagagcacagtggacagtttctac
agtcgcttccatgggatgttcttacagaatgccagccagaaagacatcattgaacagtta
caaactacattaacaattcaagacatcctgtccaacttcaagcttcgggcatttctggac
aataagtatgtgatccgccttcaggaagacagctacaacttcctcctccgctacctccag
agcgataataacagtgctctctgcaaagtcctatccttgcatattcacctagatgtgcag
cctgccaagagagtggactaccagctctatgctagtggtggctcttcacgcagtgagagc
aatggcctagaacctactgacatgcctgcttccatcctgcagaatgaggcagccttggac
ctcttgcaagatagcattaaaagagtcaaagatgggccaccatcccttactaccatatgt
ttctatgcattctataataccgaacagttgctgaatacagcagagatctcgccaaatagt
aagctgctggctgctggttttgacaattcctgtgtaaagctgtggagcttgcggcccaag
aagctgaaatctgagcctcatttagtagatatttcccgaatccacttggcctgtgatatc
ttggatgaagaggctgaagatgatgatgatgtaggaactgaaatgaagttattaagaggg
cactctggaccagtgtatagcacaagttttttgtcagacagttcaggattgctgtcatgc
tctgaagatacaactatcagatactgggatcttggatgttttacaaacactgtcttgtac
caaggacatgcttatccggtgtgggacctggacatcagcccttgcagtttgtactttgct
agtgcttctcatgaccgtacagcaagactctggtcatttgatcggacgtatcccctacgg
atatacgcgggccatttagcagatgttgactgcatcaaatttcatccaaattctaactac
ttggcaacaggatctacagacaaaacagtgcgcctctggagtacccagcaaggaaacaca
gtacgtctgtttccaggtcaccggggtcctgtcctgtcccttgccttttctcccaatggt
aagtacttggcctcagcaggtgaagaccagcgcttaaaattgtgggacttggcatctgga
actctttacaaagaactgcgggggcatacagataatatcaccagccttacttttagtcca
gatagtagtttgattgcttctgcatcaatggacaactctgttcgggtttgggatattcga
aacacttactgcaatgctcctgtagacggctcttccagcgagctagttggagtatatact
ggacagatcaataatgtactgagtgtacagtttatggcctgtaaccttcttttagtgact
ggaattgcacaagagaatcaggaacattag

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