Protobothrops mucrosquamatus (Taiwan habu): 107295436
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Entry
107295436 CDS
T05763
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107295436 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107295436 (LSM1)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107295436 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
107295436 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107295436
NCBI-ProteinID:
XP_015680238
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEVQRVEQQTKQESDKLKTQALKER
GLSVPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccgggcacggccagcctcatccaagacatcgacaagaaacacttggtc
ctccttagagatggcagaacactgattggatatttacgcagcattgatcagtttgcaaat
ctggttttgcaccaaacagtggagcgcattcacgtgggcaaaaagtatggtgacatccct
cgcggcatcttcgtagtcagaggcgagaatgttgtactcctgggagaaattgacctggaa
aaggaaagtgacacccctttgcagcaagtctcgatagaggaaatcttggaagttcaacgg
gtagagcagcaaacgaagcaagaatcggacaagttaaaaacgcaagcgctgaaagagcgc
ggcctctccgttccaagggctgatacactagacgaatactaa
DBGET
integrated database retrieval system
