KEGG   Protobothrops mucrosquamatus (Taiwan habu): 107295768
Entry
107295768         CDS       T05763                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
pmur  Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03420  Nucleotide excision repair
pmur04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pmur00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107295768 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107295768 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmur04121]
    107295768 (ERCC8)
   03400 DNA repair and recombination proteins [BR:pmur03400]
    107295768 (ERCC8)
Ubiquitin system [BR:pmur04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107295768 (ERCC8)
DNA repair and recombination proteins [BR:pmur03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      107295768 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_EML WD_LRWD1 Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_1st Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_IFT140_1st eIF2A Beta-prop_Nup120_160 Beta-prop_WDR11_1st Beta-prop_HPS5 RMC1_N
Other DBs
NCBI-GeneID: 107295768
NCBI-ProteinID: XP_015680578
LinkDB
Position
Unknown
AA seq 401 aa
MLGFLSARQAGIDDPLRLRRAEATRRVLSLELNKNKDVERIHGSGINTLDIEPVENRYML
SGGSDGTIVLYDLENFSKTPCYTCKVICSVGRNHPGVHKYSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADVFHFDGTVYSHHTSPVATRHCLIAVGTKSSKVQLCDFKSGSCSH
ILQGHTQEILAVSWSPRYEFILATGSADSRVKLWDVRRASACLLTLDQHNGEKSKAASEA
INTAHNGRVNGLCFTSDGLYLLTIGTDDRMRLWNSSSGENTLVNYGKVSNESKKGLRFTV
SHGCSSEFAFVPCSSTVAVYTIYSGDLITTLRGHYSSVDCCVFQPNFQELYSSGRDGNIL
AWVPYLKEREPDDTHAEKLSSKQCLNSAYEDAWSSSDNEAG
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgctgggttttctttccgctcgtcaggcaggaatagatgacccgctgaggctccgccgg
gcggaggctacgaggagggtattaagcttggagttaaataagaacaaagatgttgaaaga
attcatggaagtggaattaataccttggatattgaacctgttgaaaatcgatatatgtta
tcaggtggttctgatggtactattgtattgtatgaccttgagaactttagcaaaacgcca
tgctatacctgtaaagtgatttgttctgtgggaaggaaccatcctggtgttcataaatac
agcgtagagactgttcagtggtatcctcatgatactggcatgtttacctcaagttcattt
gataaaacactgaaaatatgggatacaaatactttacagcctgccgatgtatttcatttt
gatgggacagtatatagtcatcatacatctcctgttgctacaagacattgcttaattgca
gttggtaccaaaagctccaaagtacagctttgtgacttcaagtcaggatcttgttctcac
attctgcagggtcacactcaagaaattctagcagtatcttggtcaccacgttatgaattt
attttagcaactggaagtgctgacagtagagtgaaattgtgggatgtaaggagagcatct
gcctgtctactcactcttgatcaacataatggggagaagtcaaaagctgcttctgaagca
ataaatactgcccataatggaagagtcaatggcttatgttttacgagtgatgggctttac
cttttgacaattggtacagatgatcgcatgagactctggaacagttcaagtggagagaac
acactggtaaattatgggaaggtgagcaatgaaagtaaaaaaggactcaggtttactgta
tcacatggctgcagttcagaatttgcatttgtgccgtgcagtagcactgtggctgtttat
acaatttattcaggagatctaataactacgcttaggggacattatagttcggttgactgc
tgtgtctttcaacctaattttcaggaactttatagcagtggcagagatggcaatattctt
gcctgggtgccatatttaaaggaacgagaacctgatgatactcatgctgaaaagttgtcc
tctaagcagtgcttaaattctgcatatgaagacgcatggagcagcagcgataatgaggct
ggatga

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