Protobothrops mucrosquamatus (Taiwan habu): 107295941
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Entry
107295941 CDS
T05763
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107295941 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmur01007
]
107295941 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmur03016
]
107295941 (VARS2)
Enzymes [BR:
pmur01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
107295941 (VARS2)
Amino acid related enzymes [BR:
pmur01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107295941 (VARS2)
Transfer RNA biogenesis [BR:
pmur03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107295941 (VARS2)
Prokaryotic type
107295941 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
107295941
NCBI-ProteinID:
XP_029141778
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MPSAHLNSASHRNMSVLCRLLLRAEKRHWDEFGGWRRGYSQGSKTDLNKQVGKMDHLKNK
EQRQKRLWKKMEAIEAQMAAGSKETSNQGKTLSSKNIAEYDIPTIVGQKKDTSAPLPTSY
SPRYVEAAWYPWWVKEGFFKPESQQHLPHRKPETFSISLPPPNVTGSLHLGHALTVAIED
ALVRWRRMQGYRVLWLPGSDHAGIATQAVVEKKIWKERGVLRQDLSRDEFLQEVWKWIEE
KGNEIFQQLKEMGASLDWDRACFTMDSRFSQAVTEAFVQLHEQGLIYRDRRLVNWSCALQ
SAISDIEVENRRIEGRTKLSVPGLEDKVLFGVLETFAYKVEGEESMEVPVSTTRPETMFG
DVAVAIHPDDSRYLRLHGKRVCHPFTGRLLPIVTDPAVELQMGTGAVKVTPAHNHADYKL
AQRHNLPLVSVIAEDGTMTAECGEWVQGLHRFLAREKVLAALKEKGLYRGAKDHCLVLPV
CSRSGDVIEILLKNQWFVRCEAIAQSALEAVESGSLKLTPQFYEKNWKTWLLNINDWCIS
RQLWWGHQIPAYRVMLPGSPDLEERESVGLWVVGRTEAEARRKAAGMLGKSEQQLELVKD
ADVLDTWFSSSLFPFAALGWPQKTEDLQQFFPNNLLETGSDLLFFWVARMVMLGKQLTGE
LPFSQVFLHSLIHDAHGRKMSKSLGNVIDPLDVIHGASLQVLQQKLKDSNLSPREIVIGT
EGLLQNFPQGIAESGSDALRFALCRYDAHGTSINLDMAAMEKASHFCNKVWNALKFTLAA
LGEEFAPLDPEQVFPSFPMEQWILSRLYHTAEYCAQHFEEYKLHSVANAVYLFWLQDFCG
TYLESVKPILRSGDPVCLLSTRQILYSCVDLALRLLSPFMPFLTEELWQRLPKTDLEASP
SICVARYPSPEHLRHWSNPDEEANFSLVQETIQVIRSMRATYQLTKARPTVYLACSETGP
WAAYEKYQEPLQTLSLAGSVNLLPNSEEIELPLNCLAVKVNGHTSIYMDLQDLVDPHKEL
LKLTSRQQKLKQQLANLTEKLQKQNSLKAKLNHEQKISLLRSELEHTEQMFATFQKMAEH
QDAQLT
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcccatcttaattctgcttcccatcggaatatgtctgttctttgccgtttg
cttctccgggcagagaagaggcactgggatgaatttggtggatggaggaggggttattcc
caaggaagtaagactgatcttaataagcaagtggggaagatggatcatctaaaaaataag
gaacaaagacaaaagcggctgtggaaaaagatggaggctattgaagctcagatggctgct
ggatccaaggaaacttcaaatcaaggcaagaccctttcctcaaaaaacattgcagaatat
gacatcccaactatagttggacagaaaaaagatacctcagcacctttgcccacctcctac
agtccacgctatgttgaagctgcctggtatccttggtgggtgaaagaaggtttctttaaa
ccagaaagccagcaacacctgccccataggaagccagaaacattttctatctctctcccg
ccacctaatgtcacaggatcccttcacctggggcatgccttgacggtggctatcgaagat
gctttggtacgatggagacgaatgcaaggctatcgagttctctggcttccaggttctgat
catgctgggattgcaactcaggctgtggtagaaaaaaagatctggaaagaacggggagtt
ttgcgccaagatctgtcacgtgatgaatttctccaagaagtttggaagtggatcgaggag
aaagggaatgaaatattccaacagctgaaagagatgggagcatctttggactgggacaga
gcctgctttactatggattcacgtttctctcaagccgtgacagaggcttttgtgcaactt
cacgaacaaggcctgatatatcgagacaggcgcctggtgaactggtcttgtgccttgcag
tcggccatttctgacattgaggtggagaatagacggatagaaggacggacaaagctctct
gtgcctggacttgaggacaaagtgctgtttggggtattggagacctttgcctacaaagtt
gaaggagaggaaagcatggaagttcctgtatctactactcgccctgagacaatgtttggt
gatgtggctgtcgccattcaccccgatgactcacgctacttgcgcttgcacggcaagaga
gtctgccacccgttcaccggacgtctccttcctatcgttacggatccagcagtggagctg
cagatgggcacaggggccgtgaaggtcactccagcacacaaccacgctgactacaaactg
gcccagaggcacaacttgccactcgtttcagttattgcagaagatggcacgatgaccgca
gaatgtggggaatgggtgcagggactgcatcgattcctggctcgagagaaagtgttggct
gctttgaaggagaaagggctctatcggggtgcgaaagaccattgcttagtccttcctgtt
tgcagccgctctggagatgtgattgaaatcctcttgaagaaccagtggtttgtccgatgt
gaagccattgctcaaagcgccttagaggctgtggaatctggatctttgaagctcaccccc
caattttatgagaaaaactggaagacctggctcttgaacatcaatgattggtgtatttct
cgacaattgtggtggggccatcagattccagcctatcgggtcatgcttcctgggtcacct
gacctagaagagagggaaagcgttggattatgggtagtgggcaggacagaagcagaagcc
cggaggaaagcagccggcatgctgggaaaatctgaacagcagctggagctggtgaaagat
gctgatgtcttggatacttggttctcctccagcctcttcccttttgctgctttgggctgg
ccccagaagacagaagacctccagcagttctttcccaacaaccttttggagactgggagt
gatcttctgttcttttgggtcgcccggatggtgatgctgggaaaacagctaactggagaa
ctgcctttctctcaggtgttccttcactccttaatccatgatgctcatggcagaaaaatg
agcaagtctcttgggaatgtgattgaccctttggatgttattcatggggcctctttgcag
gtcctacagcagaagctaaaggatagcaatttgagcccacgagagattgtcattggtacc
gaaggcctgctgcaaaattttcctcaaggaattgccgaaagtggttctgatgctctaaga
tttgctctctgccgttacgacgctcacggcaccagtattaatttagatatggcagccatg
gaaaaagcctctcatttctgcaacaaggtgtggaatgccctaaagttcactttggcagcc
ttgggagaagaatttgcccctctggatccagagcaggtcttcccaagctttccgatggag
cagtggatcttgagccgtctctatcacacggcagaatattgtgcccagcactttgaggag
tacaaattgcattctgtggccaatgctgtttatctgttctggctgcaagatttttgcggc
acctatctggaatctgtcaagcccatcctgaggagtggagatccagtttgccttttgtct
actcggcagattttgtacagttgcgtagacctggctctgcgcctcctgtcccccttcatg
cctttcctcacagaggagctgtggcagcggcttcccaagacagacctggaggcttctcct
agtatctgtgtggccaggtacccaagccccgaacatctgaggcactggagtaatcctgat
gaagaggcaaacttctcgttagtgcaggaaactatccaagtgatacgttccatgagggcg
acttaccagctaaccaaagctcgaccaacagtgtatctggcttgctcagaaacaggcccc
tgggctgcctatgagaaatatcaggagccattacagacattgtctttggctggatctgtg
aatcttctccccaattctgaggaaatagagctacctctgaactgcctggctgtgaaggtc
aatggtcacacgagcatttacatggatctgcaggatttggtggatcctcacaaagaactc
ctcaaactgacatctcggcaacagaaattaaagcaacagctggcaaacctcacagaaaaa
cttcagaagcaaaactccttaaaagccaaattgaatcatgagcaaaagatttctttgctt
cgttcggagttggagcacacagaacagatgtttgccacttttcagaaaatggctgaacac
caagatgctcaactgacttag
DBGET
integrated database retrieval system
