KEGG   Protobothrops mucrosquamatus (Taiwan habu): 107296080
Entry
107296080         CDS       T05763                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
pmur  Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pmur00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107296080 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmur03019]
    107296080 (RAE1)
   03036 Chromosome and associated proteins [BR:pmur03036]
    107296080 (RAE1)
Messenger RNA biogenesis [BR:pmur03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107296080 (RAE1)
Chromosome and associated proteins [BR:pmur03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    107296080 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C eIF2A ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_RFWD3 NBCH_WD40 Beta-prop_ACSF4 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_SPT8 ExoI_SH3 PepSY
Other DBs
NCBI-GeneID: 107296080
NCBI-ProteinID: XP_015680907
LinkDB
Position
Unknown
AA seq 369 aa
MSLFGSTSGFGTGGTSMFGSTATDNHNPMKDIEVTSPPDDSIGCLAFSPPTLPGNFLIAG
SWANDVRCWEIQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTGSCDKTAKMWDLNSNQA
IQIAQHEAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRTPTPMMTLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPAHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACSFNHNGNIFSYASSYDWSKGHEFYNPQKKNYIFLRSAAE
ELKPRNKKY
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttgtttgggtcaacatcaggatttggaaccggaggcaccagtatgtttggcagc
actgctacagataaccacaacccaatgaaggatattgaagttacttccccacctgatgac
agcataggttgtttggctttcagcccaccaacgttgccgggtaatttccttattgcagga
tcatgggcaaatgatgttcgttgttgggaaatccaagataacgggcaaactatcccaaaa
gcccaacagatgcatacaggaccagtactagatgtttgctggagtgatgatggaagtaaa
gtgttcacagggtcctgtgataaaactgccaaaatgtgggatcttaacagtaatcaagca
atacaaattgcacagcatgaagctcctgtaaagaccgtccattggattaaagcaccaaat
tatagttgtgtgatgactggaagttgggataaaacattaaagttttgggatacacgaacc
cccactcctatgatgacgctgcagttgcctgaacgatgctattgtgctgatgtgatatat
cccatggccgttgtggctactgcagaaaggggcttgatagtttatcagttagagaatcag
ccttctgaatttagaaggatagactctccacttaaacatcagcatcgttgtgtggctatt
ttcaaagacaaagtgaacaaacccacaggctttgcccttggaagtatcgaaggaagagtt
gccattcattatattaacccaccaaatcccgccaaagacaactttaccttcaaatgccat
cgatccaatggtacaaacacatctgcgcctcaggatatctatgcagtaaacgggattgcc
ttccatcctgcccacggcactcttgcaactgtagggtctgatggcagattcagtttctgg
gataaagatgcgcggacaaagctaaaaacatccgagcagctagaccagccaatatccgct
tgctccttcaaccataacggcaacatattttcatatgcttctagttatgactggtcaaag
gggcatgaattctataatccccaaaagaaaaactatatttttctgcgcagtgctgctgaa
gaactaaaacctagaaataaaaagtattaa

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