Protobothrops mucrosquamatus (Taiwan habu): 107296194
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Entry
107296194 CDS
T05763
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03030
DNA replication
pmur03420
Nucleotide excision repair
pmur03430
Mismatch repair
pmur03440
Homologous recombination
pmur03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107296194 (RPA1)
03420 Nucleotide excision repair
107296194 (RPA1)
03430 Mismatch repair
107296194 (RPA1)
03440 Homologous recombination
107296194 (RPA1)
03460 Fanconi anemia pathway
107296194 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmur03000
]
107296194 (RPA1)
03032 DNA replication proteins [BR:
pmur03032
]
107296194 (RPA1)
03400 DNA repair and recombination proteins [BR:
pmur03400
]
107296194 (RPA1)
Transcription factors [BR:
pmur03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107296194 (RPA1)
DNA replication proteins [BR:
pmur03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107296194 (RPA1)
DNA repair and recombination proteins [BR:
pmur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107296194 (RPA1)
MMR (mismatch excision repair)
107296194 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
107296194 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
107296194
NCBI-ProteinID:
XP_015681029
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MASVAAAAAAGLSEGAIAAILLQAEPVGRPVLQLITIRPISTGNGPPRYRMLMSDGVNTL
SSFMLATQLNPLVDDQSLTANAICQINRFIVNTLKDGRRVVVLMEMEVLQPGHAVPAKIG
NPVPYVEAGRQPAAPSPATGPFQSKPVGLQSGAPDAGAQYPSSSRLLGNAGGSGILSTPG
GSQVKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIEMVDESGEIRATAF
NDQADKFFPIIEMNKVYYFSKGTLKTANKQYSSVKNDYEIAFSNETSVVPCEDAQHLPSV
QFDFVAIGDLENTNKDSLVDVIGVCKSYDDPQKITIKASNREVSKRELHLMDMSGKTVTV
TLWGADAEKFDGSRQPVVAIRGARVSDFGGRSLSVVSSSSLLVNPDCPEAFKLRGWFDSE
GQHLESASISSGRGGLMPGGNTNWKTLQESKAENLGQGDKADYFSCVGTVVYLRKENCMY
QACPSQDCNKKVIDEHNGLFRCEKCDREFPNFKYRMILSANIADFQDNQWVTCFQESAEA
ILGHNTAYLGELKEKNEHAFDEVIQNANFTSHEFRIRVKLETFNDESRLKATAMEVKPVN
YQEYCKRLILNIRKNAAQLG
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtggcggcggcggcggcggcggggctgagcgagggggccatcgcggccata
ctgctgcaggcggagccggtggggaggccggtgctgcagctgatcacgatccgccccatc
tccacggggaacggccccccacgctaccggatgctgatgagcgatggtgtgaacaccctt
tcctctttcatgctggccacgcagctgaaccctctggtggatgaccagagcttgaccgca
aatgccatttgccagattaaccgcttcattgtgaacactctgaaggatggaaggcgagtg
gtggtcttgatggaaatggaggttctgcagccgggtcacgccgtccccgccaagatcgga
aacccagtcccgtacgttgaagcagggaggcagcccgcggcccccagcccagcaaccggc
cctttccagagcaagccagtggggctccagagcggggctccagatgcaggggcacagtac
cccagctcttccagactgctggggaacgcagggggctccggcatcctgagcactccgggg
ggatctcaggtcaaagtggtgcccatcgccagcttgaacccttaccagtccaagtggacc
atctgtgcccgggtgacccagaagggccagatccgcacctggagcaactcccggggcgaa
gggaagctcttctccatagagatggtggatgagagcggtgagatccgagcgacggccttc
aacgaccaagcggacaagtttttccctatcatcgagatgaacaaggtctactacttctcc
aagggcaccctgaagacggccaacaagcagtattcgtctgtgaagaacgactacgagatc
gccttctccaacgagacgtccgtcgttccctgcgaggacgcccagcaccttccctccgtg
cagtttgacttcgtggccatcggggacttggaaaacacaaacaaggactccctcgtggac
gtgatcggggtctgcaagagctacgacgaccctcaaaagatcaccatcaaggcttccaat
cgggaggtctccaagagagaactgcacctgatggacatgtcgggcaagacagtgacggtc
actctctggggcgcggacgcggaaaagtttgacggctctcggcagccggtagtggccatc
cggggggcccgggtctcggacttcgggggccggagcctctccgtggtctcctccagcagc
ctcctggtgaaccccgactgcccggaggccttcaagctgcgaggctggtttgattcggaa
gggcagcacctggagtccgcctccatctcttctgggcggggcgggctgatgccagggggg
aacaccaactggaagaccctgcaggagtccaaggcggagaacctgggccaaggagacaag
gccgactacttcagctgcgtgggcacggtggtgtacctgcgcaaggagaactgcatgtac
caagcctgcccctcccaggactgcaacaagaaggtgattgacgagcacaatggcctcttc
cgctgcgagaagtgcgaccgggagttccccaacttcaagtaccgcatgatcctgtcggcg
aacattgcagacttccaggacaatcagtgggtgacctgcttccaggagtctgcggaggcc
atcctggggcacaacacggcttacctgggggagctgaaggagaagaacgagcacgctttc
gacgaggtcatccagaacgccaacttcacctcccacgaattccggatccgagtcaagctg
gagacgttcaatgatgagtcgcgcctgaaggccacggccatggaggtgaagcccgtcaac
taccaggagtactgcaagaggctgatcctgaacatccgcaagaacgctgcccagctgggc
taa
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integrated database retrieval system
