Protobothrops mucrosquamatus (Taiwan habu): 107296589
Help
Entry
107296589 CDS
T05763
Symbol
LAMA5
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-5
KO
K06240
laminin, alpha 3/5
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04510
Focal adhesion
pmur04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107296589 (LAMA5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107296589 (LAMA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_B
Laminin_I
Motif
Other DBs
NCBI-GeneID:
107296589
NCBI-ProteinID:
XP_015681414
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
GSCECRAFVEGEACDKCKPLYWNLTPDNPFGCTSCQCNTIGTMAGVAECQQGDGHCFCKP
NICGQKCSICREGYFNLESGNYFGCKGCQCDIGGSVGPLCEETTGSCQCRRNIRGPACSD
PAKGFYIPELHHLKYELEEGTTLEGRPVRFGYSPLEFENFSWRGYAQMSPIQPKAVXSPP
DLFCLVFCSTNQGPAKGRVSVLEERKFNMYGNCTEQTKQIVFGPTKEPSFVTVPHHSFGE
PFVLSPHVWSLIIEAEDVLLDYLVLLPSSYYEAPILQYKVSDPCTYSPAPEQVGQNCFLY
RYLPVEQFSFVSGEDALCKLDNNLPRPCPAEQIFPTFPKLVLCSGTRVEVQLVIPVPQPG
RYMLLMEYANEDTPQTTEVSVSTPQMVPRLGALMIYTCKYSFLCRGIVVDSQNRLAAFEL
DTEARVQFMADQARFFLHKVYLVPYEQFTVEFLEPKVHCISAHGTLSLNSSSCVPSRYQK
ISQSVVLEEGQSLPIAPDLPLIHAIGIPPEGGLPASAPQPPTLIDTSAKLIFLRVPQTAV
VLNGHIQSPGRYAFILHCYQPSHPTFPVEVLINGGRIWQGQANATFCPHGYGCRSLVVAE
NQIVLDITENDLTVIIRVPADRHLWVDYILVVPESIYGSNYLLEEPLDKSYDFISSCGVN
GFYINPVTSSRFCRDSAISISLFYNGAEPCHCHEAGAVSSQCEPFGGQCTCKSNIIGREC
SRCATGYWGFPNCRPCDCGFRLCDEVTGQCICPPRTVRPECVVCEPQTFGCHPLVGCEDC
NCSNSGIQDHTEPGCNIESGQCQCKPNIVGRQCDLCAPGYYGYPNCRACDCHEAGTKPSI
CDPVTGECHCKENVEGPRCDQCHLGTFSLDASNPKGCTKCFCFGATDRCHSAKKYRVEFT
DMSGWTLLSGDRQGVPTSVSLEDETVHADLRQFPDAFQELYWHAPSSYLGDQVSSYAGYL
KYELHSDIQRGDVFIPMESWADVILKGNQMSIMFVEDSYPTPGEVYNGELQLLEGNFKHT
ETHNPVSREELMMVLANLEQLQIRALFSPISSSVSLHRVILERTTETHGSVQANSVELCL
CPANYRGDSCQECAVGYYRDTKGLFLGKCIPCDCNGHSDQCLPGSGICLNCQHNTEGDHC
ERCKDGFVGNSSLEGNLQCIGCPCPLSVPSNNFATGCIYKGSTTQCLCKPGYAGFSCERC
APGYYGNPLVIGSSCQPCDCSGNADPNMLFSDCNTLTGVCTGCMYNTAGARCEICAAGFY
GDAVVAKNCTECNCLSCGTDSCDPKTGQCRCKPGVTGQHCDRCQEGYYGYETCLGCQRCD
CDIGSVSPNCHAQNGQCDCGPGVSGSRCQQCSPGYWGLSSDGCSKCQCKGGSCNPRTGEC
TCTNGLTGKQCDTCIKKHEIPVVDGPDNMRCEACDSCVLLLLEDLQKIDSDFPALEHQLK
SLNTTSIAWARLHSINGSMQTITSQVRDYQRFIYKVRQNADELEEENADFVQDLNALQHK
ATMTHRKANSLMDVTQETFQLAESLVRNVTKIQNNINDLIHLMNTFTTANTSSTSAEEFR
QKIAEVDAMLRHMKAMDFSFQSAIAVEERDELKSKEMEKQYGTIQATLRMAKDSLGKISE
HLQTIIKAKEESEKLLAQLDGARYPLSEKVKEYTLASNKIQKVELAEQHANLLDELARNL
S
NT seq
5045 nt
NT seq
+upstream
nt +downstream
nt
ggctcttgtgaatgtcgggcttttgtggaaggagaagcttgtgataaatgcaagcccctc
tactggaacctgactccagataatccatttggatgcacgagctgccaatgcaacaccata
ggaacaatggcaggcgttgctgaatgccaacagggtgatggacactgtttctgcaagccg
aacatttgcggccaaaagtgttctatttgtagagaaggttacttcaacctggagagtggt
aattactttggctgtaaagggtgccagtgtgacattggtggatcagttggtcctttgtgt
gaggagacgactggatcttgccagtgcaggcgaaatatcaggggacctgcgtgctctgat
cctgcaaaaggcttttatattcctgaacttcaccacctgaaatatgagctggaagaggga
accacactggaaggaaggccggttcgctttggctacagtccgctggaatttgagaatttc
agttggagaggatatgcacagatgtctcccatccagcccaaggcagtgtgaagtccccct
gacctcttctgcctcgtcttctgctccaccaaccaggggcctgcaaaagggagggtctca
gtccttgaggaaagaaagtttaatatgtatggcaactgtaccgaacagactaagcagatt
gtatttgggccaaccaaagagccgtcatttgtcaccgttcctcaccacagctttggcgaa
ccattcgtgttgagtcctcatgtttggtctctgatcattgaagctgaagatgtcctcctt
gattacctggttctgcttcccagctcttattatgaagctcctatattgcaatataaagta
tcggatccttgtacctatagcccagctcctgaacaagtgggtcaaaattgcttcctatat
aggtatttgcctgtggagcagttctcctttgtgtcaggcgaagatgctttgtgcaagttg
gacaacaacttaccaagaccttgtcctgcagagcagatctttcctaccttccccaaattg
gtgctgtgtagtggcactcgtgttgaagtacaactggtaattcctgtcccccagccaggg
agatacatgcttctgatggagtatgccaatgaagatactccacagaccactgaggtatct
gtgagcaccccacagatggttcctcggctgggcgctcttatgatatacacctgcaaatac
agtttcctttgtcgtgggatcgttgtagattctcaaaatcgcttggcagcatttgaactc
gacaccgaggctagagttcagttcatggcagatcaggcccgcttcttcctgcacaaggtg
tacttggtcccatatgagcaattcactgtggagtttttggagccaaaggtccattgcatc
agtgcccatggaacattatcgctgaacagtagttcctgcgtcccatcaagatatcagaag
atttcacagtcagttgtcctggaagaaggacagtcgctacccatagctccagacttgccc
ctaattcatgccattggcatcccgccagaaggcggtctgccagcttctgcaccgcagcct
ccaactttgattgacacgtctgcaaaactcattttcttaagggtgcctcagacagctgtt
gtgctaaatggccatattcagagtccaggacgctatgctttcatcctgcattgttatcag
cctagtcacccaactttccctgttgaagtgttgatcaacggagggcgaatttggcaggga
caagccaatgccactttctgcccacatggatacggttgccggagtctggtggttgcagaa
aaccaaatcgttctggatatcacagaaaatgatctgactgtaataatccgtgtgccagca
gaccggcatctttgggtggattatatccttgtggttcctgaaagcatttatggctccaac
tatcttttggaagaacccctggacaaatcctacgatttcatcagcagctgtggagtcaac
ggtttctacatcaaccctgtaacttcatccaggttctgccgggactctgcaatctcaatt
tctcttttttacaacggggccgaaccttgtcattgccatgaggctggcgctgtttcaagc
cagtgtgagccatttggaggccaatgtacatgcaagtccaatatcatcggacgagaatgt
tcccgctgtgccactggatattggggttttcccaattgccgaccctgtgactgtggattt
cgcctgtgcgatgaagtgacgggacagtgcatctgcccaccacgtaccgttagaccagag
tgtgtggtctgtgagccccaaacctttggctgtcaccccctggtgggctgtgaggactgc
aattgttctaattctgggatccaggatcacaccgaaccagggtgtaatatagagagtgga
caatgccaatgcaagcccaacatcgtaggacgtcaatgtgatctgtgtgccccaggatat
tatggctaccccaactgcagggcgtgtgactgccatgaagcagggacaaaaccaagcatc
tgtgacccggtcactggagaatgtcactgcaaggaaaatgtggaaggcccaaggtgtgat
cagtgccatttggggaccttctcccttgacgccagcaatccgaaaggctgcaccaagtgt
ttctgttttggggcaaccgatcgctgccacagtgccaagaagtaccgtgtggagttcact
gacatgagtgggtggactttgctgagtggagaccgacagggagtccccacttcagtcagt
ttggaagacgagactgttcacgctgatcttcggcagtttccagacgctttccaggaactt
tattggcacgctcccagttcttaccttggagatcaggtctcctcctatgctggatattta
aagtatgagttgcattcagacatacaaaggggtgatgtgttcataccgatggaatcctgg
gctgacgttatcctcaagggaaaccaaatgagtattatgtttgttgaagactcctatccc
actcctggagaagtttataacggagagcttcaactgctagagggtaattttaaacacact
gagacacacaacccagtctccagggaagagctgatgatggttctggctaatctggagcag
ctgcagatccgagccctcttttccccaatttcgtcctctgtgtccctgcatcgggtgatc
ctggagagaaccacagagacccatggaagcgtccaagccaatagtgtggaattgtgcctg
tgcccagccaattacagaggagattcttgccaggaatgtgctgtgggctattacagagac
accaagggtctatttctagggaaatgcattccgtgtgactgcaatgggcattcggatcag
tgcctcccaggatctggaatatgccttaattgccaacacaacacagaaggcgatcactgt
gaaaggtgtaaagatggttttgtgggcaactcttcacttgagggaaacctgcaatgcata
ggatgtccctgtcctctttcagttccatccaacaactttgccacgggatgtatctacaaa
ggctctaccacgcagtgtctttgcaagcctggttatgccggattttcctgtgaacggtgt
gctccaggttactatggtaaccctctcgtgattggcagctcctgccagccctgtgactgc
agtgggaatgctgaccccaacatgctcttcagcgattgtaacacgttgaccggggtctgc
acaggctgcatgtacaacaccgcaggggcccgatgtgaaatttgtgctgctggattttac
ggcgatgcagtggtagcaaagaactgcaccgagtgcaactgtctatcctgtgggacggac
tcgtgtgatcctaaaactggccagtgtcgatgtaagcctggggtgacaggtcagcactgt
gatcgctgtcaggaagggtattatggctacgaaacctgcttgggctgccagaggtgcgac
tgtgacattggatcggtgagccccaattgccatgcccagaatggccagtgtgattgcggt
ccgggcgtcagcggttctcgttgccagcagtgctcccctggatactggggtctcagttca
gatggctgctcaaaatgccagtgtaaaggaggttcctgcaacccacgcacaggtgaatgc
acctgtaccaacggcctgacagggaagcaatgtgacacatgtataaaaaaacatgagatc
ccggtggtggatggtccagacaacatgagatgtgaagcttgtgatagctgtgtgctgctc
ctgttagaagatctccagaagattgacagcgacttccctgccctcgaacatcagctgaaa
agtctcaacaccacctcaattgcctgggcccgcctgcacagcatcaacggctctatgcaa
accattaccagtcaagtgcgcgactatcagaggtttatatacaaagtgaggcaaaatgct
gatgagctggaagaggagaacgcggattttgttcaggatctgaatgcacttcagcacaag
gcaacaatgacccacagaaaagcaaacagtctgatggatgttacccaggagaccttccag
ctagcagagagccttgttcggaatgtcactaaaattcaaaataacattaatgatctcata
catctgatgaacacttttaccacagccaacactagttctacctctgcagaagagtttcgt
cagaagatagctgaggttgatgctatgctgaggcacatgaaagctatggattttagcttc
cagagcgccattgctgtggaggagcgcgatgaactaaagagcaaggaaatggagaaacaa
tatggcacaatccaggctactttgagaatggctaaagattccttggggaagatctctgaa
catctgcagacaattataaaggcgaaagaggaatctgagaagttactggcccagctagat
ggagccagatatcctctgtccgaaaaggtgaaagagtacactttggctagcaacaagatc
cagaaggtggagttggcagagcagcatgcaaatctactagatgaattggcacggaatctc
tccag
DBGET
integrated database retrieval system
