Protobothrops mucrosquamatus (Taiwan habu): 107296717
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Entry
107296717 CDS
T05763
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107296717 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107296717 (BARD1)
04121 Ubiquitin system [BR:
pmur04121
]
107296717 (BARD1)
03036 Chromosome and associated proteins [BR:
pmur03036
]
107296717 (BARD1)
03400 DNA repair and recombination proteins [BR:
pmur03400
]
107296717 (BARD1)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107296717 (BARD1)
Ubiquitin system [BR:
pmur04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107296717 (BARD1)
Chromosome and associated proteins [BR:
pmur03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
107296717 (BARD1)
DNA repair and recombination proteins [BR:
pmur03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
107296717 (BARD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_4
Ank_3
Ank_5
BRCT
BRCT_2
ANK_LRRK2
zf-RING_5
Ank_KRIT1
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
Prok-RING_4
NIBRIN_BRCT_II
zf-RING_10
zf-RING_UBOX
zf-rbx1
RTT107_BRCT_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
107296717
NCBI-ProteinID:
XP_015681556
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MAQEQHPQSGTPWKETRLALRRLAECLKCSLCTNILKKPVNLGSCEHVFCLSCVGNCIGT
ACPICQVPTMKQDVKINRKLDNIIKLYSKLQTLQGKDFSDPEDNVFTLGQKVEEAAAKKK
QIKMSFSPRSRRMKFTLKTSPKKSELLKKSVKDSRSCNLTSIYDFVSSPPHEKPFREEKT
PEQEYKKELRKKTLTDFSQQGDIFRGQQENSSETYKVGLSESKDPVPSYGSKSTSELRLK
NRKELAENAGKLSTSNGRPAKPKEKSNNCNFSLVPNVGGDLTSEEWFSLAKETTLLKCDR
QFAGSPISLPKCHKTKEETIHRKSRLLKKASEQFSENSVAAFPFRDYAVSSPSLPSPGIT
SPLRNLEDFAWASDPELPKVSRNCAERQVFLKKFPKNLSTKRNHKGESLLHTASIEGNLS
AVECLLKKGADPNIKDYAGWTPLHEACNHGHKQIVELLIRHGALLNVTGYQNDMPLHDAA
RNGHIEIVELLLLHGASRDVVNMFGHKPVDYAETEEMKLLLMQPGKNDSSSIMQYAESTN
LNYCKKGPVVLLGSGLDPGQQLLLSKLATVLKVRVCTEFNSSVTHVVIPAYPARTTMKCM
LALLSGCWILTFMWVEASLKSGTFEQEEKYEIDGGPRQGRLNTEQLLPKLFDGCYFYFLG
IFKEHKKDDLKELVKSGGGHILLRKPKSDNDVTQTINTVAYHAEITSDQSFCTQYIIYDA
SSNYKPQKVHQGKVWEVPSRWLIDCVMSFQLLPVKNAFPSIVIT
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggagcagcacccgcagtccggaaccccgtggaaagaaacgcggctggctttg
agacggttggccgagtgcctgaagtgctctctttgcactaacattctgaagaaacctgtg
aacctaggaagttgtgaacatgtcttctgtctaagttgtgtaggcaactgtattggcaca
gcttgcccaatatgtcaggtgccaaccatgaaacaggatgtgaaaataaacaggaaacta
gacaacatcatcaaactctatagcaagctgcaaactctgcagggcaaggatttctcagat
cctgaagataacgtgtttactttgggacagaaagttgaagaagcagcagctaaaaagaaa
caaatcaaaatgagtttcagtcctcgcagtaggaggatgaaattcaccctgaagacaagc
ccaaagaaatcagagctgctgaagaaatcagtcaaggacagcaggtcttgtaacttaacc
tccatctatgactttgtttcttcacctcctcatgagaagcctttcagagaggaaaagaca
cctgagcaagaatataagaaagaactaagaaaaaagactttaacagacttcagccaacag
ggggacatcttcaggggccaacaggaaaactccagtgaaacctataaagtaggcctaagt
gaaagcaaagatccagtccccagttatggctcaaaaagtacctcagaactgaggctgaaa
aacaggaaagagcttgcagagaatgcaggtaaactctcaacaagcaatggtagacctgcg
aaacctaaagagaagagtaacaattgcaatttttctcttgtgcctaacgttgggggagat
ctgacttctgaagagtggttttccttggcaaaagaaacaactctgttaaagtgtgacagg
cagtttgctggctctcccatttctttgcctaagtgtcacaaaacaaaagaggagactatc
caccggaagtcacgattgctgaaaaaggcctcagagcagttttccgagaattctgtggca
gcctttccctttagggattatgcagtttcttccccatctctgccatcgcctggaatcaca
tcacccctaaggaacctggaagactttgcttgggccagtgacccagaacttccaaaagtg
tccagaaattgtgctgaaaggcaggttttcctcaagaaatttcccaaaaacttatcaacc
aagagaaaccataaaggggagtctctactccatactgcttctattgagggtaatctttct
gctgttgaatgcttgttgaaaaaaggagctgatcccaacattaaagactatgctggttgg
acaccactgcatgaagcctgtaatcatggacataagcagatagttgaattgctgataaga
catggggcactgctgaatgtgactgggtatcagaatgatatgccacttcacgatgctgcc
aggaatggacatatagaaattgtggagctgctgcttttgcatggagcttctcgagatgtg
gttaatatgtttggtcacaaacctgtggattatgctgaaacagaagagatgaaattgctt
ctcatgcaaccaggaaagaatgattcttcttcaattatgcaatatgcagaatccacaaac
ctaaattactgtaaaaaagggcctgttgttctccttgggagtggtcttgatccaggtcaa
cagctgctgttaagcaaattggccacagttttgaaggttagagtatgtacagaatttaac
agttccgtgacacatgtcgttattcctgcatatcctgcgcgaactactatgaagtgcatg
ctggcacttttatctggatgttggatcttgacatttatgtgggtagaagccagcttgaag
agtggcacttttgaacaagaagagaaatatgaaatagatggtggtcctcgacaaggccgc
ctgaacacagaacagcttttgcctaaactttttgatggctgctacttctatttcctggga
atatttaaagagcacaagaaagatgacctcaaagaactggtgaaatctggagggggacat
attctcctaaggaagcctaaatcagataatgatgtgactcagacaatcaatacagtagcc
tatcatgctgagattacttctgaccagagtttctgtacacaatatataatctatgacgcc
tcttctaactacaaaccacaaaaagttcatcaaggaaaggtttgggaagtgccctccagg
tggcttattgactgtgtgatgtcatttcaactgttgcctgttaaaaatgcttttcctagc
attgtgataacataa
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integrated database retrieval system
