Protobothrops mucrosquamatus (Taiwan habu): 107296777
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Entry
107296777 CDS
T05763
Symbol
GAPVD1
Name
(RefSeq) LOW QUALITY PROTEIN: GTPase-activating protein and VPS9 domain-containing protein 1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmur04131
]
107296777 (GAPVD1)
Membrane trafficking [BR:
pmur04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107296777 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
DUF5601
VPS9
DUF5740
SPO24
Motif
Other DBs
NCBI-GeneID:
107296777
NCBI-ProteinID:
XP_029141974
LinkDB
All DBs
Position
Unknown
AA seq
1340 aa
AA seq
DB search
MVKLDMHILAHHLKQERLYVNSEKQLIQRLNAEVLKTAEKLYHTAWISKQQRINLDRLII
TSADASPAECCQHAKVLEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKF
NQENIQNVIHTVFTSIYGNCIMPEDENFLLQVLRYLVEFELKESDNPRRLLRRGTCAFSV
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPHKLTERFSPAQQEKLFGEKGS
EKFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIMSQMYKTLSCVERLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVRLCGSSISSPERSCSN
FXPMWLTHLLXGCVASFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYMTYSQLTTLVSFM
RNVMSGDQLKEDRVSLENLLLNLPQNKPGKSGSLELTPYNTPQLSPATTPASKKNRLAIG
QQLATITAWDTSATNLTAHINLVTPFATRSRSRSNIQMDQHPDYEGVCQETIQEVQPEEV
LVISLGTGPQITPGMMSENEVLNMQLADGGPGDVPVDDAKLHGKPDKTLRFSLCSDNLEG
ISEGPSNRSNSVSSLDLEGESVSESGAGPSGSNGVEALQLLEREQATTQDNLDDKLRKFE
IRDMMGLTEDRDISETVSETWSTDVLGSDFDPNIDEDRLQEITGAAAENVLGSLLCLPGS
GSVLFDPCTGSTISETTSEAWSIEVLPSDSEAPDLKQEERLQELESCSGVGSASDDTDVR
EVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETVHGASHL
TSPPCQADSLLAMFDPLVSHEVVRPKVHYARPSHPPPDPPILEGTLGGSDARLPSFASHT
AMLFDSEAFKQRYSYPERLVRSRSSDIVSSARRPMSDPGWNRRAGTEERDLLGPGSNAGG
VPMVPGLQSSSSSPSKDSCRGEIEDRKDSDDEKSDRNRPWWRKRFVSAMPKAPIPFRKKE
KQDKEKDDFIPDRFSSLQDNEIVCFLKIQLAEAINLQDKNLMAQLQETMRCVGRFDNRTC
RKLLASIAEDYRKRAPYFTYLTRCRQGLQTTQAHLERLLQRVLRDKEVANHYFTTVCVRL
LLESKESKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLV
IERSVMNRIFKLAFYPNQDGDILRDQLLHDHIQRLSKVVTANHKALQIPEVYLREAPWPS
AQAEIRTISAYKTPRDKLQCVLRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKVEKA
FVSELPYSPSSPPSLIRFTL
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaactggacatgcatattttggcccaccacctcaaacaggagcggctctacgtg
aactccgaaaagcagctgatccagcggctgaacgccgaggtgctgaagacggccgagaag
ctttaccacaccgcttggatctccaagcagcagaggatcaacttggaccgcttgatcatc
acaagcgcggatgcctctccggcggaatgttgccagcacgccaaagtgttggaagacacg
cagtttgtggacggctacaagcagctgggcttccaagagacggcctacggggaattcctc
aaccggttgcgcgagaacccccgcctcattgcgtcctgcctggtggccggcgagaagttc
aaccaggagaacattcagaacgtcatccacacggtcttcacctccatctacggcaactgc
atcatgccggaagacgagaactttcttctccaggtcttgcgctacctggtcgagtttgag
ctgaaggagagcgacaaccctcggcggctcttgcggaggggcacctgcgccttcagcgtc
ctcttcaagctcttctccgagggcctcttctccgccaagctcttcctgacggccaccttg
cacgagcccatcatgcagctgctggtggaggacgaggaccacctggagaccgacccccac
aagctgaccgagcgcttctcgcccgcccagcaggagaagctctttggggaaaagggctcc
gagaagttccggcagaaggttcaggagatggtggactccaacgaggccaagctggtggcc
ctggtcaacaagttcatcggctacctcaagcagaacacctactgcttcccgcacagcttg
cgctggatcatgtcccagatgtacaaaacgctctcctgcgtggagcggctggaggtgggg
gaagtgagggccatgtgcaccgacctgctcttggcctgcttcatttgcccggcggtggtc
aacccggaacagtatgggattatttcggatgcgccaatcaacgaagtggcaaggtttaat
ctgatgcaggtacggctgtgtgggtcaagcatcagcagcccagagagatcttgttcaaat
ttctgaccaatgtggcttacacaccttttgtagggctgtgtggcttcgttcctggatgtc
gtcattggtggccgggcagtagaaacccctccgatgtcttcggtgaatctcctggaaggg
ctgagtcgaaccgtggtttatatgacctatagccagcttaccacactggttagcttcatg
cggaatgtcatgtccggcgaccagctcaaggaagatcgagtgtctctggagaacctgctc
ttaaatctaccccagaacaagccggggaaaagcgggagcctggagctgacgccttacaac
accccacaactctcaccggcaaccactcccgccagcaaaaaaaatcgactggctatagga
caacaattggcaaccatcactgcctgggacacgtctgctaccaacctcacagctcatata
aatctcgtaaccccttttgccactcgcagcaggagccgttccaatatccagatggaccaa
catccagattacgagggggtctgccaagagaccatccaggaagtccagcccgaagaggtt
ttggtcatttctctcgggacaggtccccaaatcacgcctggcatgatgtcagaaaatgag
gttttaaacatgcagctggcggatgggggtccaggcgacgttccggtcgacgatgccaaa
ctccacggtaaacctgataaaaccctgcggttttccctctgcagtgataatctggaaggc
atttccgaaggcccttctaaccgctccaattcggtgtcctcgctggatttagaaggggaa
tccgtttccgaatcgggggctggaccgtcaggaagcaacggcgttgaggccttgcagctt
ctggagcgtgaacaagctaccacccaggacaatctggacgataaactccgtaaatttgag
atccgcgacatgatgggcttgaccgaagaccgggacatctcggaaaccgtgagcgagacc
tggagcacggacgtgctgggaagcgacttcgacccgaatattgatgaagaccgtttacag
gagatcacgggggctgcagccgaaaacgtcttgggcagcctgctatgtttgcctggttcc
ggctcggtgctgtttgatccctgcacgggctccaccatctcagaaaccaccagcgaagct
tggagcattgaggtcctcccaagcgattcagaagctccagacctgaagcaggaagagaga
ctgcaagaattggaaagctgctccggtgtgggaagcgcctccgatgacaccgacgtcaga
gaagttagttcccggcccagcacacctggcctcagtgttgtctcaggtatcagcgcaacg
tccgaagacatcccgaacaagatagaggacctgcgatccgaatgcagctccgactttggt
gggaaagattcagtcaccagcccggacatggacgaaacggtgcacggtgccagccacttg
acctcgcctccttgccaggcggattcccttctcgccatgtttgaccccttggtttctcac
gaagtggtcaggcccaaagtccactacgcccggccgtctcacccgccaccggatcccccg
atcttggaagggaccctgggcggcagcgacgccaggctgcccagcttcgcctcccacacg
gccatgctcttcgactcggaggccttcaagcagcgctactcctaccccgaaaggctcgtg
cggagccggagttccgacatcgtctcatctgcccggaggcccatgagcgatcccggctgg
aacaggcgagcggggaccgaggagcgggatcttttggggcccgggagcaacgccggaggg
gtgccgatggttcccggactgcagtcttcctcttcatctccgagcaaagattcctgcagg
ggagagattgaagaccgaaaagacagcgatgatgagaagtccgaccgaaacagaccctgg
tggaggaaacgtttcgtgtcagccatgcccaaagctccaattccgtttagaaaaaaagaa
aaacaagacaaagagaaggatgacttcatcccggatcgattttcttcccttcaagacaac
gaaatcgtctgcttcctcaaaatccagctggccgaagccatcaacctccaggacaagaac
ttgatggcccagcttcaggagaccatgcgttgcgtggggcgcttcgacaaccggacctgc
cggaaattgctggcctccatcgccgaggattacaggaaacgggcgccttacttcacctac
ctgacccgctgtcgccagggcctccagaccacccaggcccacctggaacggctgctgcag
cgagtcctgagggacaaggaggtggccaaccactacttcaccaccgtgtgcgtccgcctc
ttgctggagagcaaagaatccaagatcagagagttcattcaggatttccagaagctgacg
gcagcggacgacaagacggcccaggtggaagacttcctccagttcctctacggggcgatg
gcccaggacgtcatctggcagaacgccagcgaggagcagctgcaggacgcccagctggtg
atcgagcgcagcgtcatgaatcgcatcttcaagctggccttttaccccaatcaggacgga
gacatcctgcgggatcagcttcttcacgaccacatccaaagattgtcaaaagtggtgacg
gccaaccacaaagccctccagatcccagaggtctacctacgggaagccccctggccctca
gcccaggccgagatccggaccatcagcgcctacaagaccccccgagacaagctgcagtgt
gtcttgaggatgtgctccaccatcatgaacctgttgagcttggccaacgaggactcggtt
cccggcgcggacgatttcgtcccggtgctcgtttttgtcctcatcaaggtagagaaagcc
tttgtgtcagagctgccttactctccttcctctcctccatccctcatcagattcactctc
tga
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