Protobothrops mucrosquamatus (Taiwan habu): 107297053
Help
Entry
107297053 CDS
T05763
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03013
Nucleocytoplasmic transport
pmur03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107297053 (UPF2)
03015 mRNA surveillance pathway
107297053 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107297053 (UPF2)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107297053 (UPF2)
mRNA cycle factors
P-body specific factors
107297053 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
107297053
NCBI-ProteinID:
XP_015681897
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MPAERKKSASMEEKETSLSNKEKEFGERRSASSRDRAKDDVRLGMKREMLKPAEDKKKKV
EEEKRKKDDKEWKKKDEEKIKLEEEQKRKEEEEKQKLEEEEKKKQEEEMKLQQEEAAAKL
KEKEEAHQLHQEAWERHQARKELRSKNQNASDNRPEDNFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVAAIVEAKLKISDVNCSVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HSHVSVVISFCRHCGDDIAGLVPRKVKSAADKFNLSFPPSEIISSEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPVPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQTKDSGRDDSREVKETKENKDIAGTEDLELELENLDINDETLDLDCGDEAE
DLTKKLLDEQEQEDEETSTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
RKLVRALFIVPRQRLDLLPFYARLVGTLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFSKSDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPDSH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKRKRPPLQEYIRKLLYK
DLSKVTTEKVLRQMRKLPWHDHEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGI
NSDGTPSLLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLDV
WTKDHLFPIDIDYMISDTLELLRPKIKLCNSLDESVRQVQELEREFLIKLGLMNDKDSKD
SMTEGENLEEDEDEEEGGVEIEEQSGNESEINEAEEEEGSENEDDEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKRVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMMQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGR
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcggaagaagtcagccagcatggaagaaaaagaaacatcattaagtaac
aaagaaaaggagtttggagagagacggtcagccagcagccgggacagagccaaggacgac
gtcaggctgggcatgaagagagagatgctaaagccagctgaagataaaaagaaaaaagtg
gaggaggagaagcggaaaaaggacgacaaggagtggaagaagaaagatgaggagaagata
aaattggaagaggagcaaaagaggaaggaggaagaggaaaagcaaaagctggaagaggaa
gagaagaagaagcaagaagaagagatgaagctgcagcaggaagaagcggctgcaaagttg
aaagagaaagaagaagcccaccagctgcaccaggaagcttgggaacgccaccaagcccgg
aaggagctccgaagcaagaaccagaacgcctcggacaaccgtccagaagataacttcttc
agccggctggactccagcctcaagaaaaacaccgcctttgtgaagaagctcaagaccatc
accgagcagcagagggactccttatcccacgacttcaacggcctcaacctgagcaagtac
atcgcggaggccgtggccgccatcgtggaagccaagctgaaaatctccgacgtgaactgc
tcggtgcatctctgctcgttgtttcaccagcggtacgccgacttcgctccctcgctgctt
caggtctggaagaagcacttcgaagccaggaaagaagagaagacgcccaacatcacgaaa
ctgaggacggacttgcgcttcatcgccgagttgacgatcgttgggattttcacggacaag
gagggcctgtctttgatctacgagcagctgaaaaacattattaacgccgaccgcgagtct
cacagccacgtttcagtggtgattagcttctgccggcactgcggcgacgacattgctggc
ttggtacccaggaaggtgaaaagcgcggcagataaatttaacctgagctttccgcccagt
gagataattagctcagagaagcaacagccgtttcaaaatctgctaaaagaatacttcacc
tctttgaccaaacatctgaaaagggaccacagggaactgcagaacatcgaaagacaaaac
aggcgcattctgcattctaaaggggaattgagtgaagatcggcataagcaatatgaagaa
tttgctatgtcttatcagaagctattggcaaactctcaatctttagctgatctcctcgat
gaaaatatgccagatctccctcaagacaaaccggtgccagaagaacatggtcccggaatc
gatatttttacccctggcaaacctggcgaatatgatttggagggtggaatctgggaagac
gaagatgccagaaacttctacgagaaccttattgatttaaaagcatttgtgccggctatc
ttgtttaaagacaatgaaaaatgttctcagaccaaagattctgggagagacgactccaga
gaagtaaaagaaactaaggaaaacaaagatatagccggcaccgaagatctggaactggaa
ctagaaaatttggatattaatgacgagacccttgatttagattgtggggatgaagcagaa
gatctcacaaaaaaacttcttgacgaacaagaacaagaagatgaagaaaccagcaccgga
tcacacctaaaacttatagtagatgctttccttcaacagctcccaaattgtgtaaataga
gacctaatagacaaggcagcgatggatttttgcatgaatatgaacaccaaggctaacaga
aggaagttagtccgtgcccttttcatagttcctcggcagaggctagatttgctgcctttt
tatgcccgactggttgggacattgcacccctgtatgtccgacgtagcagaagatctctgt
tccatgctgaagggggacttcagatttcatgtgagaaagaaggaccagatcaacattgag
acgaagaacaaaacagtgagattcattggcgagctaactaagtttaagatgttctccaaa
agtgacacgctgcattgcttaaagatgcttctgtctgacttctcccatcaccacattgaa
atggcgtgcactttgttagagacttgtgggagattcctcttcaggtctccagactcccat
ttgaggaccagcgttcttttggaacaaatgatgcggaagaagcaggccatgcatctcgac
gcgcgctacgtcacgatggtggaaaacgcctactattactgtaaccctcctcccgcggag
aagacggtcaaaaggaagcgccctcctctccaggaatatattcggaagctgctctataag
gacctctccaaagtcaccactgaaaaggtcctgagacaaatgcgcaaactaccttggcat
gaccacgaagtgaaagattacgtgatatgctgtatgatcaacatctggaatgtgaaatat
aatagcattcactgtgtagccaatcttctcgccggactggtcctttatcaagaggatgtt
ggaattcacgtggtggacggagttctagaggatattcgattaggaatggaggttaaccag
ccaaaatttaatcagcggaggatcagcagcgctaagttccttggcgagctgtacaattac
agaatggtagagtcggcggtaatatttcgaactctgtactcattcacctcgtttgggatc
aactcggatggcaccccgagtctccttgatcctccagagcatcttttccgaattagactg
gtctgcaccatccttgacacctgcgggcagtattttgacagggggtctagcaagcgaaaa
ctcgattgcttcttggtctactttcagaggtatgtttggtggaagaaaagcctggatgta
tggacaaaggatcacctgttccctatagacattgactatatgatcagtgatacattagaa
ctgctgagacccaaaataaaactctgcaattctctggacgaatctgttaggcaggtacaa
gagctggaaagggaattcttaatcaaactaggtcttatgaatgacaaagactctaaggat
tccatgactgaaggagagaacctggaggaggatgaggacgaagaggaaggtggagtagag
attgaagaacaatctggaaatgaaagtgaaataaatgaagcagaggaggaggaggggtct
gagaatgaggatgacgaaggagaagaggaggaggaagagaacaccgattacctcactgac
tctaataaggagaatgaaaccgatgaagagaacacggaagtaatgattaaaggaggtggg
ctgaaacgggtcccgtgcgtcgaagatgaagattttattcaggcattggataaaatgatg
ctggaaaatttacagcaaagaagcggagagtcggtgaaagtgcaccagttggacgtggcc
atccctttgcatctcaagagccagctgaagaaaggaccaccactcggcggtggggagggg
gagtctgaatccggagacaccatgccttttgtcatgctgacccggaaaggcaacaagcag
cagtttaaaatcctaaacgtgccgatgtcctctcaactggctgccaatcactggaaccaa
cagcaggccgagcaggaagaacgcatgcggatgaaaaagctaaccttggacatcaacgaa
cggcaggaacaggaggactatcaagaaatgatgcagtccttggctcagagacccgctcca
gccaacacaaaccgagaacggcggcctcgttaccagcatcccaagggtgctcctaatgct
gatctcatctttaaaactggtggaaggtaa
DBGET
integrated database retrieval system
