Protobothrops mucrosquamatus (Taiwan habu): 107297392
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Entry
107297392 CDS
T05763
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107297392 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmur03021
]
107297392 (SMARCC1)
03036 Chromosome and associated proteins [BR:
pmur03036
]
107297392 (SMARCC1)
Transcription machinery [BR:
pmur03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107297392 (SMARCC1)
Chromosome and associated proteins [BR:
pmur03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107297392 (SMARCC1)
PBAF complex
107297392 (SMARCC1)
GBAF(ncBAF) complex
107297392 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
SpeFL
Motif
Other DBs
NCBI-GeneID:
107297392
NCBI-ProteinID:
XP_029142139
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MGPAGQSGRVAVDDGASWIFWESEVAVDYGASWTVWESEVAVDDGTSWTYVQADAPTNKT
LAGLVAQLLQFQEDAFGKHVANPAFTKFPAKCFLDFKAGGTLCYILGAAYKYKNEQGWRR
FDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPSIYLIPDIELKLANKLKEIVKRHQGSIT
DEKSKATHHIYPVPTSLDEDEWLRPVTRKDKQVLVHWGYYPDSYDTWVQASEVDAEIEDP
PFPEKPWKVHARWVLDMDVFNEWMNEEDYEVDDGKKPVSYRQRVYLRNEEPVRSPERRDR
KAAGGARKRKASPSPPLPPTPVESRKKAGKKGQASLYCKRRGQKDEDEQEDLTKDMEDPT
PVPNMEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEDTLTSGGKEDEDPNRGDQGRSL
DAGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMI
DTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLINYQVDPESRPMAMGPPPTPH
FNVLADTPSGLMPLHLRTPQIPAAQQMLNFPEKNKEKPTDLQNFGLRTDVYSKKTLAKSK
SASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSD
ASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVE
AHIKKVQEAARISGKVDPTYGLESSCIAGTADDKPEKADGPEEEKMETDADGAPADKVES
KGENEIDGNKLQEGGEDERIAEKEQDSDVSQDSKHDDKEAEENKENFDTGKEKEGSGGKR
RGEHEVSEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFE
ELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQLEQQQQQQQQQQSQNAQQ
SHQHASGPGMNPLGIALTSHQQPPPYPMMHHPMPPPHTPQPGPILGQGSMMPGQALPSRI
MPAGSAGAQSAAGATIPPSGPGNIVGPRGPLASPNGLYPQPPPSLPPPPPADGATPPPAG
PLPASTAP
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggggccagctggacagtctggaagagtagctgtggatgatggggccagctggatattc
tgggagagtgaggtggctgtggattatggggccagctggacggtctgggagagtgaggtg
gctgtggatgacgggaccagctggacgtatgtccaggccgacgcaccgacgaataaaacc
ctggctgggctggtggctcaattgctgcagttccaggaagatgccttcggaaaacacgtg
gccaatcctgccttcaccaagtttccggccaagtgcttcctggacttcaaagccggagga
actttgtgttacatcctcggggcggcttacaagtacaagaacgaacaaggatggcggaga
ttcgacttgcaaaacccgtcgcggatggaccgcaacgtcgaaatgttcatgaacattgag
aaaacattagtgcagaataactgtctgagcagacccagcatctacctcattccggacatc
gaactgaaactggcgaacaagctgaaagagattgtcaaacgccaccaggggtccatcacg
gacgagaaatcgaaagccacccatcacatataccctgttcctacctcactggatgaagac
gagtggctgagaccggtgacgaggaaagacaagcaggtcctggtgcattggggttattat
ccagacagctacgacacctgggttcaggcgagcgaagtcgacgccgagattgaagaccct
ccgtttcccgaaaagccctggaaggtccacgcccgatgggtcctggacatggacgtcttc
aacgagtggatgaacgaggaagactacgaggtggacgacggcaagaagccggtcagctat
cggcagcgggtttacttgaggaacgaagagccggtccgtagccccgagcggcgagatcgg
aaagctgcgggcggcgcccggaagaggaaggcctccccttcgcccccgctgcctcccacc
cctgtggaatccaggaagaaagccggcaagaaaggacaagccagcctctactgcaagaga
cgcgggcaaaaggacgaggatgagcaggaggatctcaccaaggacatggaggaccccacc
ccggtgcccaacatggaggaggtggtccttcccaaaaacgtcaatccgaagaaggacagc
gaaaacacgccggtgaaaggaggcaccgtagcagatcttgacgaacaagacgaggacacg
ctgacgagtggaggaaaggaagacgaagaccccaacagaggggaccagggacgctccctc
gacgccggggaagacaacgtcacggaacagaccaaccacatcatcatccccagctacgcc
tcctggtttgactacaactgcatccacgtcatcgaacgccgggctcttcccgagttcttc
aacgggaagaacaaatccaagacgccggaaatatacttagcctaccgcaatttcatgatt
gacacctatcgcctgaaccctcaagagtacctcaccagcacggcctgccggagaaatttg
accggggacgtttgtgccgtgatgagggtccacgcctttctggagcagtgggggctgatt
aattaccaagtggaccccgaaagccgacccatggcaatgggacccccgcccaccccccac
ttcaacgtgctggccgacaccccttcgggactcatgccgctccacctgcggactcctcag
atcccggctgcccaacaaatgctgaatttcccggagaaaaacaaggagaagccgaccgat
ctgcaaaacttcggtctccgcacggacgtctactccaagaaaaccttagccaagagcaaa
agcgccagcgccggccgagagtggaccgaacaagagactctccttctgcttgaggcgctg
gagatgtacaaggacgattggaacaaagtctctgagcacgtcgggagtcgcacccaggac
gagtgcatcctccattttctccggcttcccatcgaagacccttacctggagaactcggac
gcctcgctgggacctttggcgtaccagcccatccccttcagccagtccggcaatccggtg
atgagcaccgtggccttcctagcctcggtggtggacccccgggtggcgtcggccgcagcg
aaagcagcgttagaggaattttcccgcgtccgggaggaagtccctctggagctggtggag
gcccacatcaagaaggtccaggaagccgcccgtatttcggggaaagtggaccccacgtac
ggcctggagagtagctgcatcgccggaacggccgacgacaagcccgagaaagctgatgga
cctgaagaggagaagatggagacagacgcggatggagcgccggcagacaaagtagaaagc
aaaggagagaacgaaatagacgggaacaagctacaggaaggaggagaggacgagagaatc
gcagaaaaagaacaagatagtgacgtgtctcaggattccaaacacgatgacaaggaagcc
gaggagaacaaggagaactttgacacgggcaaagagaaggaaggcagcggcgggaagcgg
cgaggcgagcacgaagtctccgaagggaatgttgcgacggctgcagctgccgccctggcc
tccgctgccaccaaagccaagcatctggccgccgttgaggaacggaagatcaagtctctg
gtggctctcctggtggaaacccagatgaagaaactggagatcaaacttcgccattttgaa
gagctggaaaccatcatggatagagagaaagaggcgctggagcagcaaaggcagcagctg
ctaactgagcgtcaaaacttccacatggagcaactcaaatacgccgaactccgagcccgg
caacagttagaacagcagcagcaacaacaacaacaacaacagagccagaacgcacaacag
tcacaccagcacgccagtggtccgggcatgaatcctctgggcatagcgttgacatctcac
cagcagcctcccccttaccccatgatgcaccacccgatgcccccgccacacacccctcaa
ccaggtccaatccttggacagggctccatgatgcccggacaggccttgccaagccgaatc
atgccagccggatccgccggcgcccagtcagccgccggcgccaccatccctccctctggg
ccgggaaacatcgtgggaccccggggacccctggcatctcccaacggcttgtatcctcag
ccgcctccatctcttcctcctcctcctccggccgatggggcaacgccgccacccgcggga
ccgctccccgcctccaccgcaccctga
DBGET
integrated database retrieval system
