Protobothrops mucrosquamatus (Taiwan habu): 107298540
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Entry
107298540 CDS
T05763
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04510
Focal adhesion
pmur04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107298540 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107298540 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmur00536
]
107298540 (TNC)
Glycosaminoglycan binding proteins [BR:
pmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107298540 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
EGF
NDNF
hEGF
Motif
Other DBs
NCBI-GeneID:
107298540
NCBI-ProteinID:
XP_015683404
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MGLSVWVVASVAIFLFHQDASGGLINRIIRQKRETGINVTLPDDNHPVVFNHVYNINVPV
GSLCSVDLDAPSGDSELKLPSEPGKHYQEHTLNEENQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEELVSSLQEQCGGGSGCCSSAQTAKGTIEATPYCSGRGNYSNDVCGCICEQ
GWKGPNCSEPECPQNCNERGQCINGQCICDYGYAGYDCGELACPGDCNDQGRCVDGKCVC
FDGYAGDDCSLEVCLVPCSEYGKCVNGQCICTEGFTGVDCSQTLCLNNCNNLGRCVEEEC
VCDDGYTGEDCSELICPNDCYDRGRCINGTCYCETGFTGEDCGDLACPNDCHHNGRCENG
VCVCDEGFTGDDCSLRRCPNDCHKQGRCVDGQCVCNEGFLGPDCGEVRCLNDCHNRGQCV
NGQCVCDEGFVGEDCSQRRCPNDCHKRGKCVNGQCVCEEAFTGLDCNELRCPNDCNDHGR
CVDGQCICDEGYTAEDCSELTCPQDCNRRGRCVNGVCECNEGFLGEDCGELACINNCNNR
GRCLNGQCVCDEGFTGPACDVQSCPNNCNDLGRCVAGRCVCEEGFIGADCSDVSPPKDLL
ITEVTDKTINLEWANENIVNEYLISYIPTSTGGLELQFRVPGNKTSATIQELEPGVEYFI
RVFAILRNKKSIPINARIATYLPAPDGLKFKSVKETSVEVEWDPFNFPFHGWEIIFRSMK
EEDNGAIRSSLKSPQTSYLQHGLAPGQQYNVSLTVVKNQTRGPAVSRIVTTKLDAPSQID
SKDVTDTTVLITWFRPLAEIDGLELTYGPKDTPGDRTSIDLSEDESQYSIGNLKPHTEYE
VTLVSRRGIMASDPITETFVTDLDAPQNLRHISQTDHTITLEWKNSPTMPDLYRIKYAPL
AVGDHAEVTVPRSTQGTSKVTLSGLRPGTEYGIGVTSVKEDKESVPSTINAGTDLDSPKD
LEIIDPTETAFTLRWKRPLAKIDRYRLTFVTPLGKKNEIEIPADSTSYILRSLEAGTEYT
IILVSEKGRLKSKPSTVTGSTEEEAELGNLSIANVYWDGFFLTWTAADGAYETFVIQVRE
SNQAEDTRTLTLPGTQRSISLSGLRPSTLYTITLYGITQGYQTKPIFVESTTGAKSEVGN
LTVWGVTPESFNLSWTTAKGDFEIFTVEIIDSNRLLEPMEYNISGSLRTAHISGLPPQTS
FIIYLYGVTRGFRTQALSTTVITEAEPEVDHLLVSDATPDGFRLSWTADDGAFDSFVLKI
RDSNRLLDPLELIVPGHQRTQDVKGLKEGTEYYVDLYGVISGRRSQPLNAIAMTAVGSPK
EIAFSEITESSAVVSWKPPLTRVESFRVSYRPEAGDDLKSLTVDGNRSRIKLVDLIPGIK
YVISVVAIKGFEESEPISGFLVTELDSPSGLRVVNITDSKALAVWQPALAAVDEYLISYL
GEGETEVTRRVSGNTMEYDLIGLRPATEYTLKIQASKGPQKSRILSAKFITGPDAPKALT
ASDVQFETALLSWKPPQASITGYLLIYEAADGKVKEVVLGPESTSYSLVDLSSSTLYTAN
LQALFHTLKSNFIQTTFTTTGLLYPFPRDCSQALLNGEIASGLYTIYLNGNQSQPLEVYC
DMSSDGGGWIVFLRRQNGEVNFYQNWRTYESGFGDPNNEFWLGLDKLHKITSQGPYELRV
DLRDRGETAYALYNKFTVGDARTRYRLKVDGYSGNAGDSMSYHNVRAFSTFDKDHDSAIT
NCALSYKGAFWYKNCHRVNLMGRYGDNSHSQGVNWFHWKGHEHSIAFAEMKVRPSSFRNL
EGRQKRA
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgggcctctctgtgtgggtcgtggcctcggtggccatctttttgttccatcaagatgct
agcggtggactcatcaacagaattattcggcagaagagggagacaggaatcaacgtgacg
ctgccggacgataaccatcctgtggtcttcaaccatgtctacaatatcaatgtccccgta
ggctccctttgctccgtggacttggacgctcccagcggagactcagaactcaaacttcca
tccgagccaggcaaacactatcaggagcacacgctgaatgaagaaaatcagatcgtgttc
acacaccggatcaatatcccacggcgggcttgcggttgtgcagctgcccctgatatcaag
gacctactaagccgacttgaagaattggaagaactggtatcttctctgcaggaacagtgc
ggcggtgggtcaggatgctgctccagtgctcaaacagcgaaaggtactattgaagctaca
ccctattgcagcggacgaggaaactacagcaatgatgtttgtggctgcatctgtgaacag
ggctggaaaggaccaaattgctcagagccagaatgcccacagaactgcaatgagaggggc
cagtgcatcaatggccagtgtatttgtgactatggttatgccggctatgattgtggagag
ctggcctgtcctggggactgcaatgatcaaggcagatgtgtcgatgggaaatgcgtgtgc
tttgatggttatgctggggatgactgtagccttgaggtctgcttggtgccctgcagtgag
tacggcaagtgtgtgaatggacaatgtatctgcactgaaggtttcactggggtagactgc
agccagaccctttgccttaacaactgcaataatctggggcgctgtgtggaagaagagtgt
gtgtgtgatgacggatacacgggtgaggactgcagtgagctcatttgccccaacgattgc
tatgaccggggtcgttgcatcaacggcacctgctactgtgaaactgggttcactggtgag
gactgtggggacctggcctgtccaaatgattgccaccataacggacgctgtgagaatggt
gtgtgtgtgtgtgatgaaggattcaccggagatgactgttctctacggaggtgtcccaac
gactgtcacaaacagggacgctgtgtcgatgggcaatgtgtgtgcaatgaaggcttcttg
ggaccagactgtggagaagtgaggtgtctcaatgactgccacaaccgggggcagtgtgtg
aatgggcaatgtgtatgcgatgaaggctttgtgggtgaggactgcagccagcgtaggtgt
cccaacgattgccacaagcgggggaaatgtgtgaatggccagtgtgtatgtgaagaagct
ttcactgggcttgattgcaatgaactgcggtgccccaatgactgcaacgaccacggacgc
tgtgttgatgggcaatgcatttgcgatgaaggctacacagctgaagactgctcagaactg
acctgtccccaggactgcaaccgtcgcggacgctgtgtcaatggggtctgtgaatgtaat
gaaggcttccttggggaggactgtggggagctagcttgcatcaacaactgcaacaaccga
ggccgttgtctgaacggacagtgtgtatgcgacgagggcttcaccgggcctgcttgtgat
gtacagtcctgccccaacaattgcaatgatcttggtcgctgtgtagctgggcgatgtgtc
tgtgaagaaggatttataggtgccgactgttcagatgtatctcctccgaaggatttgttg
attacggaagtgacagataagaccattaacctggaatgggcaaatgaaaacattgtcaat
gaatatctcatcagctacattccgaccagtactggtggcttagaacttcagttccgggta
cctggaaataaaacatcagccaccattcaggagctggaacctggtgtggaatatttcatc
cgtgtttttgccatcctaaggaacaaaaaaagcatcccaattaatgcccggattgctact
tacttgcctgcccccgatggcttgaagttcaaatccgttaaagagacgtccgtggaagtt
gaatgggatccctttaatttccctttccatgggtgggagatcatctttagaagcatgaaa
gaggaagacaacggggccatccgaagcagtctgaagagccctcagacttcatacctacaa
cacggccttgcaccaggacagcagtataatgtatctctgactgtcgtgaagaatcagacc
cgaggacctgctgtgtcaaggattgtgaccactaaactggatgcccccagccagattgac
tcaaaggatgttacagacacaaccgtcctcataacatggttcagacccttagctgagatc
gacggacttgagctgacttatgggcccaaggataccccaggggaccgcacgtccattgac
ctgtccgaagacgaaagccagtattccattggaaatctgaagcctcacactgaatatgaa
gtgaccctcgtgtctcggcgcggaattatggcaagtgaccccatcactgagacttttgtc
acagatctggatgctccccaaaacctcagacacatttctcagacagaccacaccatcacc
ctggagtggaaaaacagtccgacgatgccagatctttacaggatcaaatatgcacccctc
gctgttggagatcacgctgaggtcacagtgcccagaagcacccagggcacctccaaagtt
acactctctggcctgagaccgggaacagaatacggcattggggtaacctcagtgaaagag
gacaaagagagcgttccttccaccatcaatgctggaaccgatctggatagtccgaaggac
ttggagatcattgaccccaccgaaactgcctttactttacgttggaagagacccttggcc
aaaattgaccgctaccgccttactttcgtcaccccactggggaagaagaatgaaattgag
attccggctgatagcacctcctacatccttcggtcattagaggctggaacggagtacacc
atcatccttgtgtctgaaaaaggacgactcaagagtaagccctcaacggtcacaggttct
acagaagaagaagctgagctggggaatttatccattgcaaacgtctactgggatggattc
ttcctcacctggaccgcagctgatggggcctatgagacttttgtcatacaggtgcgggag
tcgaaccaagcagaagatacacggactctcacccttccagggacacaacggtccataagt
ctctccggtctcagaccaagtactctttacacaatcaccctctatgggataactcagggc
taccaaacaaaacccatctttgttgaatctaccacaggggccaaatcagaagttggaaac
ctgactgtttggggcgttaccccagaaagcttcaacctctcctggacgaccgccaaagga
gactttgagatctttaccgttgaaattattgattctaacaggttgctggaacccatggaa
tacaacatttcgggcagtttaaggactgctcatatctcagggctgccccctcaaaccagt
ttcattatctacctctacggagtcactcgtggcttccgcacccaggcattaagcacaacc
gtcataacagaagccgaacctgaagtagatcaccttttggtctcggatgctaccccggat
ggtttccgtctgtcttggacggcggacgatggagcctttgacagttttgtccttaaaatc
agggattccaatagacttttagatcccctggagttaatcgtgccaggtcaccaacggacc
caggatgtcaaagggctgaaagaagggactgaatattatgtagatctctacggagttatc
agcggacggcgttcccagcctctaaacgcaattgctatgacagcggtgggatccccaaag
gaaatcgctttctcggaaataacagaaagttcagctgtggttagttggaagcctccactg
acgcgggttgaaagtttccgggtttcctacaggccggaagctggagatgatctcaaatct
ctgacagttgacggaaacaggagtagaatcaagctagtagatctgatcccgggcataaaa
tatgtcatcagtgttgtggctatcaaaggatttgaagaaagtgaacccatctctggattt
ttggttacagaattggatagtccgtccgggctgagggtggtgaacatcacggattccaaa
gctttagctgtctggcagccagcccttgccgcagtcgacgaatacctgatttcctatctt
ggagaaggagagacagaggtgacacggagagtatccggcaacacgatggaatatgatctc
attggccttcgaccagctaccgaatataccctgaagattcaagcctccaaagggccgcag
aaaagcagaatcctctctgccaaattcattacaggtccagatgctcccaaagctctgact
gcttctgatgtccagtttgaaacagccctgctctcgtggaagccaccccaggcatctatc
acaggctacctcctgatctacgaagctgctgatggcaaagtcaaggaagtggtcctgggg
cccgaatcgacttcttatagcctggtggacttgagttcatccactttgtacacagcaaat
cttcaggcactgttccacacgttgaagagcaacttcatccaaaccacgttcaccacaact
ggactcctctaccctttccccagagactgctcccaagctctgctgaatggagaaatcgct
tctggactctacaccatttatctcaacggcaatcagtctcagcccctggaagtgtactgc
gacatgagttctgacggaggcgggtggattgtctttctgaggaggcagaatggcgaagta
aacttctaccagaactggaggacttacgagagtggttttggagatcccaacaatgaattc
tggctagggctggacaagcttcacaaaatcacttcccaaggcccgtatgagctgagggta
gatctgcgcgatcgtggagagactgcctatgctctctacaacaagtttactgtgggtgat
gccaggacacgctatcggctgaaagtagatggctacagtggcaatgcaggtgattccatg
agttaccacaacgtacgagcgttctccacctttgacaaggaccacgactccgccatcaca
aattgtgccttatcgtacaaaggggcgttctggtacaaaaactgccatcgggtcaacctt
atgggtcggtacggagacaacagccacagccagggcgtcaactggttccactggaaaggc
cacgagcattcgattgcctttgcggagatgaaagtccgaccttccagttttaggaactta
gaaggaaggcagaagagagcataa
DBGET
integrated database retrieval system
