Protobothrops mucrosquamatus (Taiwan habu): 107298995
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Entry
107298995 CDS
T05763
Name
(RefSeq) LOW QUALITY PROTEIN: antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur02010
ABC transporters
pmur04145
Phagocytosis
pmur05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107298995
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
107298995
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107298995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmur02000
]
107298995
Enzymes [BR:
pmur01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
107298995
Transporters [BR:
pmur02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
107298995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_30
AAA_15
AAA_22
AAA_16
AAA_29
Motif
Other DBs
NCBI-GeneID:
107298995
NCBI-ProteinID:
XP_029142490
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MPVPVVFQAIPLLFCDRILLSLLNGWSSSLVPLGVSAAWLEAALRLLVLLGVRGLLSVGR
TSPMSFCTVAAVSILPPLYLLVGHWFGDPPLLVSSAAWSWWLAIYGAVGFSQLLCGILAE
GRSPKESRKEDKATLCKMLKLFCPDKLYLTGAFLFLVLAVIGETFLPYYTGRLIDILGTK
YDAEAFSTAISLLFLISFASSVFGSCRGGLFMFTISRMVIRTRNLLFSSLVRQDLAFFQE
VKTGALASRLSKDTTMMSRSVPLNTNIFLRTLIKSIGLYVFMIGLSWRLTLLMLIETPLM
MAVQKFYNVRHQALLKAIQDSVAHSEEVVHEVISSVQTVRSFATEEEESQRYEASLEDTC
RLRNQRDLERIVYLFAVRTLIYIYGDALSNVGAAEKVFEYLDRKPSVSTEGMLSPETLSG
HISFQNVSFCYPSRPEIQVLKNVSFELCPGEVMALVGPNGSGKSSCVALLEHFYEPQSGE
VLLDGEPVGKYEHKYLHRQVALVGQEPVLFSGSVWDNIAYGLQGCSEEDVKRAAKEADAL
GFINELEGGFAAEVGEKGGQLSIGQKQRLAIARALIRDPKVLILDEATSALDTKSEAAIL
ESLQKSKARTVLVIAHRMQTVENAHKIVVLEDGVVVEEXTYTELMDRRGPLYRLVERTQA
TSGIATEMLGHRIHCFCRCQMHDWPGR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgccggtccctgtcgtgtttcaggcaattcccctgcttttctgcgaccgaatcctgctc
tccttgctgaatggatggagctcctccctggtccccttgggggtctcagcggcttggctg
gaggccgctctccgactgctggttctcttgggggtcaggggcctgctctccgtgggtcgg
acctccccaatgtccttttgcacggtggctgcagtcagcatcctgccccctttgtacctg
ttggtgggacactggtttggggaccctcccctcctggtctcttcggctgcttggtcttgg
tggctggcaatctacggggcggtgggcttctcccagctcctctgtgggatcctggcagaa
ggacgaagcccaaaggagtcccggaaagaagacaaagccaccctttgtaagatgctcaag
ctcttctgtccagacaagctgtatctcactggcgctttcttgttcctcgtcctggcggtg
attggtgaaacattcctgccctattacaccgggcgtttgattgacatcctgggcaccaaa
tatgacgcagaagccttttccacagctatctctctactcttcctgatctcatttgcaagc
tccgtgtttggcagctgccgtggggggctcttcatgttcacgatctcacggatggttatc
cggactcgcaacttactcttctcttctctggtgcggcaagacctggccttcttccaggag
gtgaaaacaggagctctggcgtcccgcctttccaaagacacgactatgatgagccgctcg
gtgccactcaacaccaacatcttcctgcgcaccctgatcaagtccattgggctctacgta
ttcatgattggcctgtcctggcgcctgacgctgctaatgctgatcgagaccccactcatg
atggccgtccagaagttctataatgtccgtcatcaggctttactgaaggcgatccaggac
tcggtggcccactcagaggaggtggtgcatgaggtaatctcctccgtgcagacggtgcgc
agctttgccactgaggaggaggaatcgcagcgctatgaggcgtccttggaagacacctgc
cggctgaggaaccaaagagacttggaaaggatcgtttacttattcgctgtacggaccctg
atttacatttatggggatgccctgagcaatgtgggcgcagcagaaaaagtatttgaatat
cttgaccggaaaccttctgtcagcacagaagggatgctgtctccagaaaccctctccgga
cacatctccttccaaaatgtttccttctgctatccttcccgccccgagatccaggtcctg
aagaatgtctcctttgagctctgccctggggaagtgatggcgctggtgggcccgaacggc
agcggaaagagcagctgcgtcgccctcctggagcacttctacgaaccccagtctggggag
gtcctgctggatggagaaccagttgggaaatatgagcacaagtatctccataggcaggtg
gccctggtgggccaggagcccgtcctattctccgggtccgtctgggacaatatcgcctac
ggcctgcaaggctgcagtgaagaagatgtgaagagagcagcgaaagaagctgatgccctg
ggattcatcaatgagctggaaggaggcttcgctgcagaggtgggggagaagggagggcag
ctctccatcgggcagaagcaacgattggccatcgcccgggccctgatccgtgacccaaag
gtcttgatactggatgaagccacgagtgccctggacaccaagagtgaagctgcaatcctg
gagtctctgcagaaaagtaaagctcggaccgtgctggtgattgctcaccggatgcagacg
gtggaaaacgcacacaagattgtggtgctggaagacggtgttgttgtggaggagtagact
tacacggaattgatggacaggagaggccccttgtacagactggtggaaaggacccaggca
acttccggcattgcaacggagatgctcggccacaggatccactgcttttgtagatgccaa
atgcatgattggccggggagatag
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