Protobothrops mucrosquamatus (Taiwan habu): 107302065
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Entry
107302065 CDS
T05763
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03022
Basal transcription factors
pmur03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107302065
09124 Replication and repair
03420 Nucleotide excision repair
107302065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmur03021
]
107302065
03400 DNA repair and recombination proteins [BR:
pmur03400
]
107302065
Enzymes [BR:
pmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107302065
Transcription machinery [BR:
pmur03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107302065
DNA repair and recombination proteins [BR:
pmur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107302065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
107302065
NCBI-ProteinID:
XP_015686678
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MGKKERDKKKSKKRHYEEEEEEEYDLTGKESQEAVPSAAGKQVEDSGTKVDEYGAKDYRN
QMPLKADHSSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAYSL
YAAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESTHPE
VIQQLLQDQVIRECRLRNAEGEETELITETFKSKSAISKSGENSGPSTSQGPDGQNKPDV
PADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIQLEYPLLAEYDFRNDSVNP
DINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVL
GNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSWEAE
RVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLI
GPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRAC
QFLIKFHERRNDKIIVFADNVFALKEYAVRLGKPYIYGPTAQGERMQILQNFKHNPKINT
IFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMIAEEYNAFFYSLVS
QDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELMFSSKEEQQQLLQKVLQASDLDA
EEEVVAGEYGSKSSQISRHYGTMSSMSGADDTVYMEYQTSRSKASSNKHIHPLFKRFRK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaggagcgagataagaagaaatcgaaaaaacgccactatgaggaggaagag
gaagaagaatatgaccttacaggcaaagagtcccaagaagcagttccatcagctgcaggg
aagcaagtggaagattctgggaccaaagttgatgaatatggtgcaaaagactacaggaac
cagatgccactcaaagctgatcattcctcacgcccattgtgggtggctcctgatggccat
attttcttagaagccttttcacctgtgtacaagtatgcccaggattttcttgtggccatt
gctgagccagtttgccgacctacccatgtccatgaatataaactgactgcttactccctg
tatgctgctgtcagtgtgggtttgcaaaccagcgatatcactgaatatctacaaaaactg
agtaagactggtgtgcctgatgggatcattcagtttattaagctatgtactgttagttat
ggaaaggtgaagctggtcctgaagcataacaggtattttgtagaaagcacccaccctgaa
gtcattcagcaacttcttcaagaccaagttattagggagtgtcgcctgagaaatgcagag
ggggaagaaactgaactcataactgaaacattcaagagcaaatctgcaatttcaaagtct
ggtgaaaatagtgggccatcaacttctcaagggccagacggtcagaataaaccagatgtc
cctgctgacttatttgaattttatgaacaaatggacaaagatgaagaagaggaagaggaa
actcaaactgtgtcttttgaagtgaagcaggaaatgattgaagagcttcagaagcgttgc
attcagctggagtaccctctgcttgctgaatatgatttcagaaatgattctgtgaatcca
gatattaacatagacttgaaacccacagctgttctccgaccataccaggagaagagtttg
agaaaaatgtttgggaatggtcgtgctagatctggggttatcgtcttgccttgtggtgct
ggcaagtcacttgtaggtgtaacagctgcttgcactgttcgtaagcggtgcctggtattg
ggtaattctgctgtctcagtggagcagtggaaagcccagttcaagatgtggtctaccatt
gatgatagccaaatctgccgatttacttctgatgccaaagacaaaccaattggctgttct
atagctatcagcacctactccatgttgggacacacaacaaagaggtcatgggaggcagag
agagtgatggaatggttgaagagccaagaatggggtctgatgatcctcgatgaagtgcat
accatacctgcaaaaatgttcaggcgtgtgctcactattgttcaggcccattgcaagctt
ggattaacagccactcttgtccgagaagatgacaaaattgtagacctgaatttcctgatt
gggcctaaactctatgaagccaattggatggaattgcaaaacagtggttatattgctaaa
gtccagtgtgctgaggtttggtgtccaatgtctcctgaattctacagagaatacgtagct
attaaaacaaagaagcggatattgctctatactatgaacccaaacaaatttagagcttgc
cagttcctgattaaattccacgaacgaaggaatgataagatcatcgtctttgctgacaat
gtgtttgctttgaaggagtatgctgttagattgggcaaaccttatatttatgggcctaca
gcacagggggagaggatgcaaatactgcagaatttcaaacacaatcccaaaatcaatacc
atctttatctccaaggttggtgatacatcttttgatctgccggaagccaatgttctcatt
caaatttcatctcatgggggctctcgaagacaggaggctcagagactgggtcgagtctta
agagccaaaaaaggaatgattgcagaggaatacaatgcctttttttattctttggtctct
caggacactcaagaaatggcatattctacaaaacgtcaaaggtttctagtagatcaaggc
tatagctttaaggtaattactaaacttgcaggtatggaagaggaagaacttatgttttca
tccaaagaagaacagcagcagctcctccaaaaagttttacaagcctctgatctggatgct
gaagaagaggtggttgcaggagaatatggctcaaagtcatctcagatatcccgacattat
ggcacaatgagttccatgtctggagcagatgatacagtttacatggaatatcaaacctca
cgaagcaaggcgtcttcaaataaacatattcatccactttttaaacgctttaggaaataa
DBGET
integrated database retrieval system
