Protobothrops mucrosquamatus (Taiwan habu): 107302288
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Entry
107302288 CDS
T05763
Symbol
CCDC88A
Name
(RefSeq) girdin
KO
K25392
girdin
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmur03037
]
107302288 (CCDC88A)
Cilium and associated proteins [BR:
pmur03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107302288 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
GAS
bZIP_1
Motif
Other DBs
NCBI-GeneID:
107302288
NCBI-ProteinID:
XP_029143029
LinkDB
All DBs
Position
Unknown
AA seq
2033 aa
AA seq
DB search
MENEIFTPLLEVFISSPLVTWVKTFGSLAGQNATNLEEYVALLDGVFLNEVMLQINPKAV
SQRINKKVNNDGSLRIQNLSILIRQIKSYYQETLQQLIMMPLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQSLDFDVRAAVAAHIQEVTHNQENVFDLQWMDDNA
LTQDYIEPLLKNMALHLKRLIDERDEHSETIIELSEERDSLHFLPHASAAQSPCVSPGMK
CTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQNETELKRLQQENMSLLSD
ARSARVYRDELDALREKAIRVDKLESELSRYKERLHDIEFYKARIEELKEDNQVLLETKT
MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMSLEMAQKQ
SMDESLHLGWELEQINRSSEISEVPQKSLGHEVNELTSSRLLKLEMENQTLLKTVEELQN
AMGSVEGNNSKLMKMEKENQRLNKKLEGLRNEFTEEKQSHQSSQNLCKDLMKEKAQLEKT
IETLRENSERQIKILEQEIEHLNQTVTSLRQRSQISAEARVKDIEKENKILHESIKETSS
KLSKVEFEKKQMKKELEHYKERGERMDELEKEVHHLEKENELLQKRITNLKITCEKIDSL
EQENSSLDVENRKLKKALDSLKNLSFQLESLEKENAQLDEENLELRRTVESLKSNNIKMA
QLELENKELESEKGQLQKSLELMKTSFKKTERLEVSYQGLDTENQRLQKTLENNNKKIQH
LESELQELESENQTLQKNLEELKISSKRLEKLEKENKLLEQETTQLEKDKKQLEKENKRL
RQQADIMDNTLEENNVKIGHLEKENKSLFKEIGLCKEASIRLKEVEKENKELVKRATIDK
KTLVTLREDLVNEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSKYKLLESRL
ESTLKKSLEIKEEKIAALEARLEESTNLNRQLRQELKIVKKNYEALKQRQEEEKMVQSYS
SKLDEESQPVTKWERENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQHETQNN
NLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTINSQSTSLMNQNAQLLIQQSTLEN
ENESIIKEREDLKSFYDSLIKDHEKLEQLHERQAAEYESLISKHGNLKSAHKNLEVEYKD
LEDRYSELLQQKVQLEELEKGLKVEQEKMLQQNKKHEMVAVQYKKLCEENDRLNHTYIQL
LKENEVLQVDHKNLKTLLNSSKLEQTRLEAEFSKLKEQYQQLDITHTKLNNQCELLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYEPSPPRRRGNWITLKMRKLIKSKKDVNRERLKSLTLTPTRSESSEGFLQLPHQ
DSQDSSSVGSNSLEDGQIVGTKKSSMVALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLMQ
SMVLAGGQWIGSSEHLEGPDDISTGKRRKELGSMAFSTTSINFATVNSAAGLRSKQLLNN
KDATSFEDVSPQGISDDSSTGSRIQASRPASLDSGRTSTSNSNNNASLHDVKAGATNNQS
RPQSHSSGEFSLLHEHEAWSSSSSSPIQYLKSHTKSSLLLHHTMSEKIDKQGMRRIKTES
PGSEMVTLQQFLEESHKVTSAELKSSSKDNLLDEVMKFFSENAELTGREKLSKPTSGSSG
IVRSQSVRNTTELSDVKLGKQEPLARLNLNRTEDSKDWNFLETYAAGTKGKIRSAKENVQ
SQRQSKDCNPYATLPRASSVISTAEGTTRRTSIHDFLSKDTRQPIFVDPSPATAEQNIIS
SSSEYNPQQQTSIFYYAPDNAVSFSKNDLANITIPDNLNIPERLSNSRTKTKFITKTFSL
SNVNNDKVGISSSGHFSMPFLTLNTELVCDVSGIPQTSITKTAKSFHSLVKLPQKDHKQP
FENQKSENENKKVDITQNSNKFKILVHSDPNDSESPLPADEDTQTIWYEYGCV
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgagatattcacacctcttttggaggtcttcatatccagcccacttgttacc
tgggttaagacatttggatcgttagctggacaaaatgcaaccaacttggaagaatacgtt
gcacttctagatggagttttcttaaatgaagttatgctgcaaataaaccctaaagcagtt
agtcaaagaataaataagaaggtcaacaatgatggatcacttcgaattcaaaatttgtct
attttaataagacaaattaaatcatattatcaggagacattgcagcaattgatcatgatg
cctttgccaaatgttttaataattggaaaaaatcccttttcagaacaaggcactgaagaa
gtaaaaaaactccttctacttctgcttggctgtgctgttcagtgccagaagaaagaagaa
ttcattgaaagaatacagagtttagattttgatgtaagagcagctgttgccgcccacata
caagaggtaacccataatcaggaaaatgtgttcgatctccagtggatggatgacaatgct
ctaacacaagattatattgaacctctcctaaaaaacatggcattgcatttaaaacgactt
atagatgagcgagatgagcattctgagactatcatagagctttctgaagaacgagactct
cttcattttctacctcatgcatcagcagcacaatcaccttgtgtatctccaggaatgaaa
tgcactgaaagcagacaacacttatcagtggaattagcagatgccaaagcaaagattaga
aggcttagacaagagcttgaggaaaagactgaacagttgctggattgtaagcaagaactt
gaacagaatgaaactgaattaaagcgacttcaacaagagaatatgagtttactttcggat
gcccgatctgccagagtgtatcgggatgaacttgatgctctcagagagaaggcaatccgg
gttgacaagcttgaaagtgaactcagccgatataaagaaaggctacacgatattgaattc
tacaaggctagaatagaggagctaaaagaagataatcaagtattactggaaacaaagaca
atgttggaagatcagttagagggaacccgagcccgttctgataaattgcatgaattggaa
aaggagaatctgcaattaaaggctaaactccacgatatggagatggaacgcgatatggat
cggaagaaaattgaggaacttatggaggaaaatatgtcactagaaatggctcagaagcaa
agtatggatgaatcattacatttgggctgggaacttgaacagataaacagatcatcagaa
atttctgaagtgccacagaagtcacttggtcatgaagtgaatgaactaacatcaagtaga
ttattaaaactagaaatggaaaaccaaactttattaaaaacagtagaagaattacaaaat
gcaatgggttccgtagaaggcaataactcaaaactaatgaaaatggaaaaagaaaatcaa
aggctaaataaaaagcttgaaggacttaggaacgaatttactgaagagaaacagagtcat
cagagtagtcagaatctttgcaaagatctcatgaaagagaaagcacagcttgaaaaaacg
attgaaactttgagagaaaattcagagagacagattaaaatcctggaacaggaaattgaa
cacttgaatcaaactgtcacttcacttcgacagcgttcacaaatcagtgctgaagcaaga
gtaaaagatattgagaaggaaaataaaattctccatgaatctatcaaggagacaagtagc
aaactgagtaaagtagaatttgaaaagaagcaaatgaaaaaagagttggaacattataaa
gaaaggggagaaagaatggatgagttggagaaagaagttcatcatcttgaaaaagaaaat
gaactattacagaaaaggattactaatttaaaaattacatgtgaaaaaattgattcttta
gaacaagagaactccagtctagatgttgaaaacagaaagctgaaaaaggctttagacagt
ctgaaaaatctcagctttcagttagagtctttagagaaagagaacgcacaacttgatgaa
gaaaatttagaactcagaagaactgttgaatctttgaagagtaacaatatcaagatggct
cagttagaattagaaaataaagaactggaaagtgagaaaggacaactacagaagagcctg
gagcttatgaaaacatcttttaaaaagacagaacgtttggaagtaagttatcaaggcttg
gatacagaaaatcaaaggttgcagaaaaccctagaaaacaacaacaaaaaaattcaacat
ctagaaagtgaattacaagaactggagtcagaaaatcaaaccctgcaaaaaaatcttgag
gaactcaaaatctccagtaaacgtttagaaaaattagaaaaagagaataaacttttggag
caagagacaacccagctggaaaaagataagaaacagctagagaaagagaataaaaggctc
aggcaacaagcagatattatggataacacactagaagaaaataatgtgaaaataggtcac
ctggaaaaagagaacaagtcactctttaaagaaattggtttatgtaaagaagcctctatt
cgtctaaaagaagtggaaaaggaaaataaagagcttgtaaaaagagctactattgacaaa
aaaacacttgtcacattacgtgaggatttggtgaatgaaaaactgaagacacagcagatg
aataatgacttggaaaagcttacacatgaacttgaaaagataggtttaaacaaggaacgt
cttttacatgatgagcagagtactgatgacagtaagtacaaacttttggagtcaaggtta
gagtccacactgaagaaatcacttgaaataaaagaagaaaaaattgctgccttggaagcg
cgattagaagaatcaactaatctaaatcgacagttgcgccaagagcttaagatagtgaaa
aagaattatgaagccctcaagcaaagacaagaggaggagaaaatggtacagagttattct
tcaaaacttgatgaagaaagtcagcctgtcactaaatgggaaagagagaatcaggaaact
actagagaacttttgaaggttaaagacagattaattgaagttgaaagaaataatgcaact
ctgcaagcagagaagcaagccctgaaaactcaactaaagcaacatgagacgcagaataat
aatttgcaagctcagattttagcacttcaaagacagactgtttccttacaggagcaaaat
acaaccctgcaaactcaaaatgcaaaacttcaggtggagaattcaacaattaattcccaa
agcacatcacttatgaaccagaatgcacagctattgattcaacaatcaaccttagaaaat
gaaaatgaatccataataaaggaacgggaagacctgaagtcattttatgattctctaatc
aaagatcatgaaaaattggaacaacttcatgagcggcaagcagctgaatatgagtctctc
atttctaaacatggaaaccttaaatctgcacataagaatcttgaggtagaatataaggat
ttagaagacagatacagtgaattacttcagcaaaaagtacaactagaggaattggaaaaa
ggcctcaaagtggagcaagagaaaatgcttcagcaaaacaagaaacatgaaatggtagca
gtgcaatacaaaaagctttgtgaagaaaatgatagattaaatcatacatacatacaactt
ttgaaagagaatgaagttcttcaggttgatcacaagaatttaaaaactttattaaacagt
tctaaactagagcaaacaagactggaggctgaattttctaaacttaaagaacaatatcaa
caactggacattactcacacaaaattaaataatcagtgcgagttgcttagccaactaaaa
gggaacttagaagaagaaaacagacatctactggaccaaatacagactttaatgctacaa
aacagaacacttttggaacagaatatggaaagcaaagatctcttccatgttgagcaaaga
caatatattgacaagttgaatgaattgagaagacaaaaagaaaaattagaagaaaagatt
atggatcagtataaattctatgaaccatctccccctagaaggagaggcaactggattact
ctgaaaatgaggaaattgataaaatcaaagaaagatgtcaaccgagaacgcctcaaatct
ttgactctaacaccaacccgctcagaatctagtgaaggatttcttcagctgccacatcaa
gatagtcaagatagttcctctgtgggctcaaattcacttgaagatggccagatagtggga
actaaaaaaagcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaag
gaaaaagacaaaatgaaggccttctaccgtcgctccatgtcaatgaatgacctgatgcag
tccatggtcttagcaggaggacaatggataggtagttctgagcatctggaaggtcctgat
gatatatccacgggtaaaaggagaaaagaattgggatctatggccttctctactacatcc
atcaactttgcaactgtcaactctgctgcaggcttgagatccaagcagttgcttaataat
aaagatgcaacatcttttgaagatgtcagtccacaaggaattagtgacgattctagtaca
ggttcaagaattcaagcttccagaccggccagccttgatagtggcagaacatcaactagc
aatagcaataataatgcatcactgcatgatgtcaaagcaggtgcaactaacaaccaaagc
aggcctcaaagccacagtagtggagaattcagccttcttcatgagcatgaagcatggtcc
agtagtagcagcagccccatacagtatttgaaaagtcacactaaatctagtctcctgctt
catcatacaatgtcagaaaaaatagataaacaaggaatgcggagaattaaaactgaatcc
cctggaagtgaaatggttactctgcagcaatttctggaagaaagtcataaagttacttca
gcagagctaaagtcttcaagcaaagataatcttttggatgaagtaatgaaatttttttcg
gagaatgctgaattaacaggaagagaaaaactaagcaaacccacatcaggcagtagtggt
attgtcagatcgcagagtgtaagaaatacaacagaattatctgatgtaaagttaggtaag
caagagcctcttgcaaggctcaatttaaacagaacagaagattctaaagattggaacttt
ttagagacatatgctgcaggcactaaaggaaagatcagatctgctaaagaaaatgtccag
tcacagcgacaatccaaagactgcaatccctatgctactttacctcgtgcaagcagtgtg
atttcaacagcagaaggaactactcggaggaccagtatccatgattttttatctaaggac
actaggcagccaatatttgttgatccttctccagctacagctgaacaaaatattatatca
tcttcgagtgagtacaatcctcaacaacaaacttctattttttattatgctcctgataat
gcagttagtttttccaaaaatgacttagctaatattactatacctgataatttgaatata
cctgaaaggcttagcaattccagaacaaagaccaaatttattactaaaacattttctctc
agtaatgtaaataatgataaagtgggtatatcatcttcaggccatttttctatgccattt
ctgacgcttaatactgaattagtctgtgatgttagtggaatacctcaaacatccataacc
aaaacagctaaatcatttcattcattggtgaaattgccacagaaagatcacaaacaacct
tttgaaaatcagaaatctgaaaatgaaaataaaaaggtagatatcacacagaatagcaac
aaatttaaaatccttgtgcattcagaccctaatgatagtgaatccccattaccagctgat
gaagatacccaaactatttggtatgaatatggttgtgtatga
DBGET
integrated database retrieval system
