Protobothrops mucrosquamatus (Taiwan habu): 107302572
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Entry
107302572 CDS
T05763
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmur03016
]
107302572 (CDKAL1)
Enzymes [BR:
pmur01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
107302572 (CDKAL1)
Transfer RNA biogenesis [BR:
pmur03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
107302572 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
107302572
NCBI-ProteinID:
XP_015687177
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MIAAGDLCLEDIEDIVSAEDPKPFDRQFSRKNIIPKVRKRQSQKNVEVDDPPPRDSVIPG
IQKIWIRTWGCSHNSSDGEYMAGQLAAYGYSITENAAEADLWLLNSCTVKSPAEDHFRNS
IKKAQEGKKKIVLAGCVPQAQPRQDYLHGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYSIEELVNRG
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHVPVQSASDSVLMDMKREYCVADFKHVVDFLKTKVPGITIATDI
ICGFPGETDEDFQETMKLVEEYRFPSLFINQFYPRPGTPAAKMPQVPAQIKKQRTKELSK
LFHSYNPYDHKIGERQKVLVTEESFDSKFYVAHNKFYEQILVPKNPDFMGKMVEVEIFEA
GKHFMRGQPVSEARVFTPSIRRPYARGEVSGLTEEFRQALENDSESKACPSVERQIVQLS
HWMVMQLPWQHEGKLLKMLSLSVALLAVLIAFYYGDI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgctggtgatctttgccttgaggacattgaagatattgtgtcagcagaagat
ccaaagccgtttgatcgtcagttcagtagaaaaaacatcattcctaaagtgcgaaaacgc
cagtcacaaaagaacgtggaagtggatgatcctccccctagagatagtgtgattcccggt
atacagaaaatttggatacgcacatggggatgttcccataatagttcagatggtgaatac
atggctggacagctagctgcttatggatacagtataacagaaaatgcagccgaagcagac
ctctggctattgaacagttgtacagtaaaaagccctgctgaagaccactttcgaaactca
attaagaaagcacaagaaggaaaaaagaaaattgttctagctggatgtgttccacaagcc
cagccccgacaagactatctgcatggactgagcattattggggttcaacagatagatcgt
gtagtggaagtcgttgaggaaactattaagggtcattctgtaagattgctgggacagaaa
aaggataatgggaaacggttggggggagcacgactggatttgccaaagattagaaagaac
cccctgatagaaatcatttccatcaatacagggtgtctcaatgcatgtacttattgcaaa
actaagcatgcccgaggggaattagcaagctattctattgaagaactggtaaacagaggc
aaacagtcctttcaagaaggagtatgcgagatatggctgaccagcgaagatacaggagct
tatggcagagacattggcacagatctcccgactctcttgtggaagctagttgaagtgatc
cccgagggagcaatgctaaggctcggcatgacaaatcctccgtatattttagagcatctg
gaggaaatggctaaaattctcaaccatccaagagtctatgcttttctacatgtaccagtt
caatctgcttctgatagtgtattaatggacatgaagagagaatattgcgtagctgatttc
aaacatgtggtggattttcttaaaactaaagtacctggaataacaattgctacagacatc
atttgtgggtttccaggggaaaccgatgaagattttcaagaaaccatgaaacttgtggaa
gaatacaggtttccaagtctttttattaaccagttttatccacgccctgggactccagct
gcaaaaatgcctcaggttccagctcagataaagaaacaaagaacaaaagaactgtccaaa
ctgtttcattcatacaatccatatgatcacaagattggggagagacagaaagtgcttgtt
acagaagaatcctttgattccaagttttatgttgctcataataagttctacgaacagatt
cttgtaccaaagaaccctgacttcatgggtaagatggtagaagtggaaatttttgaagca
gggaagcattttatgagaggacagccagtatcagaggccagagtgttcactccatctatc
agaaggccatatgcccgaggagaagtttctggtttaacagaggagttcagacaagcactg
gagaatgactcagaatcaaaagcctgtccatctgttgagcggcaaatcgtacaattgagc
cactggatggtgatgcagttgccttggcaacacgagggaaaactgctgaagatgctgtca
ctaagtgtggctcttctagcagttcttattgccttttactatggagacatttaa
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