Protobothrops mucrosquamatus (Taiwan habu): 107302710
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Entry
107302710 CDS
T05763
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmur00536
]
107302710 (COL25A1)
Glycosaminoglycan binding proteins [BR:
pmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107302710 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
107302710
NCBI-ProteinID:
XP_015687374
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MVGKRNPDANGEAGCFGGQGFCPLRSAPPFNSLLAACLLSVGSIASCVYLGMKTNDLQAR
VFAIETAQGDMGAAALAGSYQTLPSYSLDQLNSLMQEKVEQLLAQKTYEHMAKIRTVREA
SLDCNCPPGPPGKRGKRGRRGETGPPGQPGPQGPPGPKGEKGDQGDQGPRMVFPKINHGF
LSADQQLIKRRLIKGDQGQVGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQG
LVGPQGPPGQKGSFGAPGIPGTDGQQGEPGAMGERGVSGLKGDPGQRGEKGDAGEFGPKG
HPGEKGDPGSSAAGIKGEPGQSGRPGQKGEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGL
PGTKGERGEVGAPGKGERGEPGAPGLKGRSGESGTRGPKGSKGDPGNNGDLGAVGPRGPP
GEKGDQGATEIIDFNGNIHEALQRITTLTVTGPPGPPGLQGLQGSKGEPGSPGLSGADGE
QGPKGSKGDLGDPGIPGEKGGIGLPGLPGSNGMKGEKGDVGLPGSQGPSLIGPPGSPGPH
GPPGPMGPHGLPGPKGMDGPIGPHGPAGPKGDRGEKGIAGDPGPRGPYGLPGKDGEPGLD
GFPGPRGEKGDVGEKGEKGFRGIKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQKVDG
KEFPSVQSV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggtggggaaaagaaaccccgacgccaacggggaagccggctgctttggcggacagggc
ttctgtcccctcaggtctgctccgcccttcaactcgctgctggctgcctgccttctctcg
gtgggatccatagcttcctgcgtctatctggggatgaagaccaacgaccttcaggcgagg
gtctttgccattgagacagcgcaaggggacatgggtgccgctgctcttgctgggtcctac
cagacgctgcccagctattctttggatcagctgaattccctgatgcaggaaaaagtggag
caacttctggctcagaagacctatgaacatatggcaaaaatcaggacagtaagagaagct
tctttggactgcaactgcccaccaggtcctcctggtaaacgaggtaaacgaggaagaaga
ggagagactggacctcccggtcaacctggtcctcaaggtccacctggtccaaaaggtgag
aagggagatcaaggtgatcagggccctcggatggtgtttcctaaaatcaatcatgggttt
ctctctgctgatcagcagctcattaaacgccgcctcattaagggtgatcaagggcaagtt
ggacctcctggacctcctggaccccctggaccaagagggcctcctggagatactggcaaa
gatgggccacgaggaatgcctggggtgccgggagaacctggaaaaccaggtgaacaagga
ttggtgggacctcagggacctccgggacaaaagggctcatttggtgcacctggtatccca
ggaacagatggacaacagggagaacctggtgcaatgggagaaagaggagtctctgggctt
aagggtgatcctggacaacggggagaaaagggtgatgctggagaatttggtcccaaaggt
caccctggagaaaagggtgatcctggatcttctgctgcgggaattaagggggaacctgga
caatcgggtagaccaggacaaaagggtgaacctggactacctggacttcctgggttacct
ggaattaagggtgaaccgggtttcctaggtccacagggagaacctggattgccaggattg
ccaggaacaaagggtgaaagaggagaagtaggagctcctgggaaaggtgaacgaggtgag
cctggagctccagggctaaaggggaggtcaggtgaatctggaactagaggccctaaaggg
tcaaagggtgatccaggaaataacggtgatttgggagcagtgggaccaaggggtccacct
ggagaaaaaggtgaccaaggtgccacagaaatcattgacttcaatggaaatatccatgaa
gctttacagaggattaccaccttaactgtcacgggtcctccaggcccacctggactccaa
ggattgcaaggatcaaagggtgaacctggatcaccaggattatctggtgctgatggggag
cagggacccaaaggttcaaagggtgatctgggtgacccaggaataccaggagaaaaagga
ggtattggacttccaggtttgccaggatccaatggaatgaaaggagaaaaaggagatgtt
ggattaccaggttctcaaggtccctctctcataggacctccaggttctcctggtccacat
ggtccaccaggacctatgggacctcatggactccctgggccaaagggtatggatggtccc
attggtccacatggtcctgcaggtccaaagggagacagaggtgaaaaaggaattgcagga
gatcctgggcccagaggaccgtatggtttgcctggcaaagatggtgaacctggccttgat
ggattccctggtccacgtggagaaaagggtgatgtaggagaaaagggagaaaagggattc
cgtggaattaagggggaaaaaggggagccaggccaacctggtctggatgggctggatgcc
ccttgccaattggggccagatgggttaccaatgcccggttgctggcaaaaggttgatgga
aaagaatttccatctgtgcagtctgtgtag
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