Protobothrops mucrosquamatus (Taiwan habu): 107302799
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Entry
107302799 CDS
T05763
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107302799 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmur03041
]
107302799 (PRPF4)
Spliceosome [BR:
pmur03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107302799 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD_LRWD1
WD40_like
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
107302799
NCBI-ProteinID:
XP_015687438
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MASLRVSAGTKMKASNDGDAPPAKKGPIFYGSLEEKERERILKGESGMMGKEAVKAAIEA
GNINISTGEVFDLEDHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLF
GEGPAERRERLRNILSVVGPDALKKTKKDDEKSKKSKEEYQQTWYHEGPTTLKTARLWIA
NYSLPRAVKRLDEARLFKEVPEATRTSQKQELHKSLRSLNNFCSQIGDDRPISFCHFSSN
SKFLATACWSGLCKIWSVPDCKLVLTLRGHNTNVGAIVFHPKATISLDKKDVNLASCAAD
GSVKLWSLESDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQE
GHSKGVYDIAFHGDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGVSFSPNGYHI
ATGSGDNTCKVWDLRQRRCIYTIPAHQNLITGVKYEPNHGNFLLTGAYDNTAKVWTHPGW
NPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWMAE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttgcgggtctccgcggggacaaaaatgaaggcttccaacgatggagacgcc
cctcctgctaagaagggccccattttctatgggagcctggaggagaaagagcgcgagcgg
attctgaagggcgagtcggggatgatgggcaaagaagccgtcaaagcagccattgaggcg
ggcaatatcaacatctccaccggcgaagtttttgacctggaagaccacatcagcgagcgt
caagccgaagtcctggccgaatttgagcgccggaaacgggcgaggcaaatcaacgtttcc
acagacgactccgaggtcaaggcctgcttacgggcgctcggagaacccataacgctgttt
ggagaagggccagccgaaaggagggagagactgcgtaacattctctcggtggttggtccg
gatgccttgaaaaaaaccaagaaggatgatgaaaaatccaagaagtccaaagaggagtat
cagcagacttggtaccatgaagggccaaccaccttgaagacagccagactctggattgca
aattactctcttccacgagcagtgaagcggctggacgaagcccgtttgtttaaggaggtg
cccgaagccacacggacatcccagaaacaagagcttcacaaatctttgaggtctctgaat
aacttctgcagccaaattggggatgaccgtccgatttccttttgtcacttcagttccaac
tccaaattcttggccacggcctgttggagcggcctgtgcaagatatggtcagtgccagat
tgcaagcttgttctcactttgagagggcataataccaacgttggcgccatcgtcttccat
cccaaggcaaccatctcattggacaagaaggatgtcaatctggcgtcctgcgcagccgac
ggctctgtcaagctctggagtctagaaagcgacgaaccagtggctgacatagaaggtcac
acggtcagagtggcccgggtcacttggcatccttctggcagatttttgggcaccacgtgc
tacgaccactcctggcgtttgtgggacctggaagcccaggaggagatccttcaccaggag
gggcacagcaaaggggtctacgatatcgccttccacggtgatggctccctagctggcacc
ggcggcctcgatgcatttggccgcgtctgggacctgcgcaccggccgctgcatcatgttc
ctggaaggacatctcaaagagatctacggggtcagcttttcccctaatgggtaccacatc
gctaccggcagtggagacaacacctgcaaagtttgggaccttcgccagaggaggtgcatt
tacaccatccccgcccatcagaatctgatcaccggggtgaaatatgaaccgaatcacggc
aacttcttgctgaccggggcctacgacaacacggccaaggtgtggacccaccctggctgg
aaccccttgaagaccttggccggacacgagggcaaagtcatgggtctggacatttccttg
gacgggcagctgattgccacctgctcctacgaccggaccttcaagctatggatggcagaa
taa
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