Protobothrops mucrosquamatus (Taiwan habu): 107302845
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Entry
107302845 CDS
T05763
Symbol
RC3H1
Name
(RefSeq) roquin-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmur03000
]
107302845 (RC3H1)
04121 Ubiquitin system [BR:
pmur04121
]
107302845 (RC3H1)
Transcription factors [BR:
pmur03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
107302845 (RC3H1)
Ubiquitin system [BR:
pmur04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107302845 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-RING_2
zf-C3HC4_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
FYVE
zf_CCCH_4
PaaA_PaaC
zf-CCCH_UNK
Baculo_IE-1
Vesi_VP2
zf-RING_4
zf-CCCH_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
107302845
NCBI-ProteinID:
XP_015687487
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IEHLPVNSALLQLVGAQMPEQQPITLRSGAEDTKHYEEARKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLTRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRRECPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPAAAIISDE
ATVDLPNRKPSTLPNGIVSPGSAVTQLISRGTDSSYDSVMKPGKMDHHSSSAPGSPPDLL
EPVSKSSHPMPPRGPTDLPPISVGKQLQIVPRGSQLYPAQQTDMFYPDPRGAAPPFEPPP
YQAGVYYPPAQSLQCMSRFVRPPSSVPEPGPPFVEQHYAPYLQDRIMNSQYSAQPQQYPP
MSQPVYPPHYDSRRVYPAAQPYQREDIIRGSPVPIEISPPTVSPYVPETRDRYQQVEGYY
PVGPHLNQIRPSYHREPYSRAPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFASSPTL
PHSLHTDEYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDIVAVGLVEMVN
VDSKGMRDQRLDLQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNPGPIQAMTVQ
GASAKPVSVSDYSPYGTHSAWGGSPYSPHQTVPSQGRLGDRERLSMTDIANHGKPLPSSE
REQQLRLELQQLNHQISQQTRGLEAVSNRLLLQREATPLAGQPQPPPPPPKWPGMISSEQ
LSLELHQVEREIGKRTRELSMESQSSLDVKNKANASKQTENGQQGKVPPEDLSLTFSDLP
NGSAPTQELIGLLSNKTTALNLSEDTDAGAGDQDTQRTGATPTSAP
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgccctatttgcacacaaaca
ttcgacgaaacgatccggaaacccatcagtctaggttgtggccacacagtctgcaagatg
tgcctgaacaagctccatcggaaagcatgtcctttcgaccagaccactatcaatacagac
atagaacatcttcctgtgaactcagctttgctgcagcttgtgggtgctcaaatgccagaa
cagcaaccaataactctacgcagtggtgctgaagatactaaacattatgaggaagccagg
aaatgtgtggaagaactagccttataccttaaaccactcagcagtgcaagaggtgtggga
ttgaacagcacaactcagagtgtgcttagtcggcccatgcaaaggaagcttgtgacatta
gtccattgccagctggtggaagaagaagggcggatccgagctatgcgtgcagcacgatct
ctgggtgaaagaactgttactgagcttattcttcagcaccagaatcctcagcaattatct
tcaaacctttgggctgcagtgagggctagaggctgtcagttccttggaccagcgatgcaa
gaggaagctctgaagttagttcttttagctttagaagatggatctgctttatctcgaaaa
gttttggttctctttgtggtacagaggttggagccacgatttcctcaggcttctaaaacc
agcattgggcatgttgtccagcttctttacagagcctcctgtttcaaggtgactaaacgt
gatgaggattcctccctaatgcaactgaaggaggaattcagaacatatgaagctctgaga
cgagaacatgattcccaaattgtacaaattgctatggaggctggtttgcggatagctcca
gatcagtggtcttcattgctgtatggagaccagtctcacaaatcccacatgcagtccatt
attgacaagttgcagaccccagcctcttttgcacagagtgttcaggaattaacaattgct
ctccagagaactggtgatccagctaatttgacccggcttcgaccccatcttgaacttctt
gcaaatattgatcccagtccagatgccccaccacccacatgggaacagcttgagaatgga
ttagttgctgtacggactgtggtacatggattggttgattacattcagaatcacagcaaa
aaaggagctgatcagcaacagccacctcagcacagcaagtacaagacatatatgtgtcga
gatatgaagcagagaagagaatgcccccgtggggccagctgcacatttgcacactcacag
gaagaactagaaaaatttcgcaagatgaacaaacgtctagttcctcgaagacctttgagt
gcctccttaggtcaactaaatgaagtgggcctaccagcagcagctattatctcagatgaa
gcaacagtggacttacccaatagaaaaccttctaccttgccaaatgggattgtttcacca
ggcagtgcagtgacacaacttatctctcgtgggaccgactccagttatgactcagtcatg
aaacctgggaagatggatcaccatagtagcagtgcccctggatcacctcctgatttgctg
gaacctgtttccaagagctctcacccaatgcccccccgaggacctacagacttgcctcca
atttctgtgggcaagcagctccaaatagttcctcgaggctcccagttgtatccagctcag
caaaccgatatgttctatccagatcctcgaggagcagctcccccattcgagcctccaccc
tatcaagcaggtgtatattatcctccagctcaatcactacagtgtatgtctcgatttgtc
cgacctccatcatctgttcctgaaccaggacctccttttgtagaacaacattatgcaccc
tatctccaagatcgcatcatgaactcacaatacagcgcacaaccacagcaataccctcca
atgagtcaacctgtatatcctcctcattatgacagcagacgtgtgtatcctgctgctcag
ccataccaacgggaagatattatccgaggaagtcctgttccgattgaaatttctccacct
actgtatcaccatatgtacctgaaacaagagacagatatcaacaggtggagggctactat
ccagttggaccacatctgaatcagattagaccttcatatcatagagaaccttatagtcgg
gctccccctcagccacaccctagtctagatgaattgcatcgaaggcgaaaggagattatg
gctcaactggaagaaaggaaggtcatctccccaccaccatttgcatcatcaccaaccctg
cctcattctttacacactgatgagtacttggatgaagacctgaaggtagcaggaaaatac
aaaggaaatgattacagccaatactctccctggtcgtgtgacactattggctcctacatt
ggaaccaaagatgcaaaacccaaagacattgtggcagtgggtcttgtagagatggtgaat
gtggacagcaagggaatgcgagatcaacgtttggatttacaaaggagagcagcagagact
ggtgatgatgatcttattccctttggagatagacctacagtttcgaggtttggtgccatc
tcacgtacctccaaagcaatgtaccagaatccaggccccatacaagccatgacagttcaa
ggggcttctgcaaaaccagtcagtgtttcagattacagcccatatggaacacacagtgca
tggggaggttcaccatattcaccccatcaaactgtaccttctcagggccggcttggtgac
agggagagattatctatgacagatattgctaaccatggaaaacctttgccatcatctgag
agagaacagcagcttcgtcttgaactgcagcagttaaaccatcagataagtcagcagaca
cgaggacttgaggcggttagtaacaggctgctgttgcagagggaagcgacccctttggca
ggccaaccacagcccccaccaccacctcctaagtggcctggaatgatctcaagtgaacag
ctgagcttggagctgcaccaggtggagagggaaatcgggaagagaacccgggaactaagc
atggagagccagtcttcattggatgtgaaaaacaaagcaaatgctagtaaacagactgaa
aatggacagcaaggcaaagtaccacctgaggatctttctctaacattcagtgatcttcca
aatggatctgccccaacccaagaacttataggccttctgtcaaacaaaactacagctctg
aacttgtcagaggacaccgacgcaggagcaggtgaccaggatacccagagaactggagca
acacccacctctgctccttga
DBGET
integrated database retrieval system
