Protobothrops mucrosquamatus (Taiwan habu): 107303080
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Entry
107303080 CDS
T05763
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03013
Nucleocytoplasmic transport
pmur03015
mRNA surveillance pathway
pmur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107303080 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
107303080 (CASC3)
03015 mRNA surveillance pathway
107303080 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmur03019
]
107303080 (CASC3)
Messenger RNA biogenesis [BR:
pmur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107303080 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
107303080
NCBI-ProteinID:
XP_015687756
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MADRRRQRASQDSSEEDESDSPPGSAGSSPQSGTHRFGLAGAASTGDATAGTENVEAPVT
VGGSPADSECESEDGIEGDAVLSDYESAEDSEAEEGEYSEEETTKMDLKRDRNDTELRTK
ADKGDEKPESKGTVAGERQSGDGQESTEQVENKIGKKLPKHLDDDEDRKNPAYIPRKGLF
FEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAH
NPDDIKPRRVRKPRFGSPPQRESNWSSERPSKPPRHQSLDSTSVAPRTFINRNSAGTGWM
ASPRAFPKPSGYKDTRPSYRAVDVNSQHAPRFSEQSKPESSYRARRSDPIPAREPSPKSE
IPPIQNSPVKKEVVVLENQTPPADILQTQPDRPVEKKSYSRARRSRNKASETGKLADEVP
PPSELIPAPLKTADIIPSPSSAKTANWEVPVEANLDGLEQDMTQLNMTEQNWNQGQPQFI
PPQGLPNQMHIGTAPPPQFNRIEDMGVQGGRAKRYSSQRQRPVPEPAPPVHISIMEGHYY
DALQFQGPIYTHGENPTPLPPQGVIVQPEMHLSHPGLHPHQAPAPLANAGLYPPPVSMPP
GQQPPPPPPPPQQLLAPTYFPPPGVMNFGNPSYPYPPGALPPPPPPHLYPNTQTQSQVYG
GVTYYNTVQQQVQPKPSPPRRASQPVTIKPPPPEDGRHEKSKERNNI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgtaggaggcagcgcgcttcgcaggatagcagcgaagaggatgagtccgat
tcgccgcctggaagcgcaggttcttcaccgcagagcggcactcaccgctttggcttagcc
ggagcggcaagcaccggggatgctactgctggtactgaaaatgtggaggcgccggtgacg
gttggaggtagcccggccgactcggagtgtgaaagtgaagatggcatagaaggagatgct
gtactgtctgactatgaaagtgctgaggattctgaggctgaggaaggagaatacagtgaa
gaagaaacaactaaaatggacttaaagcgggacagaaatgacactgaattgagaacaaaa
gcagacaaaggggatgagaaaccagaatcaaaaggcacagttgcaggtgaaaggcagagt
ggggatgggcaggaaagcactgaacaagttgaaaacaaaattggtaaaaaacttcctaag
catctagatgatgatgaagaccggaagaacccagcatacatacctcgtaaaggtcttttc
tttgaacatgacctccgtggacaaacccaggaagaggaagtccgaccaaaaggtcgccag
cgtaaattgtggaaagatgagggacgatgggaacatgacaagtttcgagaagatgagcaa
gcaccaaaatccagacaagagctaattgctctttatggctatgatatccgctctgcacac
aaccctgatgacatcaaacccaggagggtgcgcaaaccaagatttgggagtccaccacag
agagaatccaattggtccagtgaacgaccaagtaagccaccacgacatcagagtctagac
agtacttctgtggcacctcggacattcattaatcgaaactccgcagggacaggatggatg
gccagcccaagggcattccccaaacctagtggctataaagatactcgcccaagttatcga
gctgtggatgtaaatagtcaacatgcacctcgcttcagtgaacagtcaaagcctgaaagc
agttaccgggccagacgatcagatccaatcccagcaagagagccttctcccaaatctgag
ataccacctattcaaaacagccctgttaaaaaagaagtagtagttttggaaaatcaaact
ccacctgcagatattctacagacacagccagataggcctgtggaaaaaaaatcatattct
cgggcaaggaggagtcggaacaaagcaagtgagacaggaaaattggcagatgaagttcca
cctccatcagaattgataccggcaccattaaaaactgctgatattataccatcaccttct
tctgcaaagactgctaattgggaggtacctgttgaggcaaatctggatggtcttgaacaa
gacatgactcagttgaatatgacagaacaaaactggaaccaagggcagccccagttcata
ccaccacagggtttgcctaatcagatgcacattggaacagccccaccccctcaattcaac
aggatagaagacatgggggttcaaggtgggcgtgcaaaacgctactcatcacagcgtcag
cggcctgtcccagaacctgctccaccagtccatataagcataatggaagggcattactat
gatgcattacagttccaaggtccaatttatacacatggtgaaaatcctactccacttcct
cctcaaggggtgattgttcaaccagaaatgcatctttcacatccaggattgcatccacat
caggcacctgcacctctggctaatgctggcttatatcctcctcctgtctccatgcctcct
gggcagcagccaccaccaccaccaccaccaccacaacagctgttagcaccaacctacttt
ccccctcctggagtaatgaattttggcaatcccagttacccctaccctccaggagcactt
ccacctcccccacctccccacctgtatccaaacactcaaacccagtctcaggtgtatgga
ggggtcacctactacaacacagttcagcagcaagtgcagcccaaaccttctccaccccga
agagcctcccagccagtcactatcaagccaccccctcctgaggatggcagacatgaaaaa
tccaaagaaaggaacaacatttag
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