KEGG   Protobothrops mucrosquamatus (Taiwan habu): 107303140
Entry
107303140         CDS       T05763                                 
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
  KO
K06237  collagen type IV alpha
Organism
pmur  Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04382  Cornified envelope formation
pmur04510  Focal adhesion
pmur04512  ECM-receptor interaction
pmur04518  Integrin signaling
pmur04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmur00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107303140 (COL4A6)
   04518 Integrin signaling
    107303140 (COL4A6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107303140 (COL4A6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107303140 (COL4A6)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    107303140 (COL4A6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmur04147]
    107303140 (COL4A6)
   00536 Glycosaminoglycan binding proteins [BR:pmur00536]
    107303140 (COL4A6)
Exosome [BR:pmur04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   107303140 (COL4A6)
Glycosaminoglycan binding proteins [BR:pmur00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107303140 (COL4A6)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 107303140
NCBI-ProteinID: XP_029138762
LinkDB
Position
Unknown
AA seq 1708 aa
MFAGAPVLVIALCLAARPVRGGGKKFYHGICGGRDCTAGCKCFPEKGARGQPGLIGNQGP
MGIEGFTGPEGVRGLKGERGVTGPTGAAGMKGDKGPMGVPGFPGIYGVPGHPGQPGSRGL
PGLDGCNGTIGSPGTSGSDGLPGLQGPPGRPGPKGPKGEPVYAPEIFRGVKGESGLPGLD
GAIGPKGFPGRPGPAGPIGLPGFPGPPGFPGPAGPVGSSNLVFQGEKGEKGDVGLPGLAG
PPSSTGTEEYVGVSKGQRGAKGVPGPKGIPGLPGVPGRPGFWGFGEKGEKGIPGLPGPRG
DMGQRGPEGSIGRKGVLGESGFPGWDGSPGKKGDFGDVGPPGLPIIVDTSGAIISGPPGE
PGTPGNPGSRGDGGTIGLPGFPGQPGRTPTFPGPPGSMGIPGISGVKGDRGEPGRTTVGS
PGLPGKDGAPGLPGPPGLPGASDTAYPAGAILRGEPGEPGIPGPRGPPGIFGLRGYKGEG
GDCACDGGITRIGLPGESGNPGQPGGQGDVGPKGSVGDPGDGILGPPGPPGFPGQPGLPG
IKGQKGEPSSVSGRGPRGDPGNIGLRGPSGPPGTPGRDGVQGVPGQHGPPGDDGFGYPGD
KGFPGLAGAKGKRGEIGLPGIGFPGPNGSFGPRGDPGISGIPGQPGPPGPPGDCCCGEEV
GNGDLDAQGGEAVPCIIPGIVGPPGLPGLSGLPGSKGSKGFPGFSGQPGSIGLKGEPGTP
GEARFPGMPGFPGPRGDPGSKGLPGIDGADGLPGPEGCPGVVGPNGSPGDVFGAEPGSRG
EPGPPGLPGDKGFPGDFGFPGTPGLDGKPGLPGRKGGFGEPGLPGFDGPPGPPGPGGPFG
IKGKPGPLGTIGLPGSQGCQGLPGTKGPRGDAGSPGPAGMKGLPGLNGRPGEAGERGLPG
PPGLWGPDGTPGFPGSKGEKGSLGVIGFPGMPGPPGLPGVDGLQGTSGEPGRSGSPGFSG
FPGLKGDRGVHGPPGPPISIPPEVALRFKGNKGDSGLVGQRGYPGPRGGKGAPGVRGQPG
LPGRSGSPSREKGQPGEPGFPGTFGRPGLLGQKGSGGISGFPGMPGGRGAEGIPGSLAPP
GINGLRGPKGDRGETRGIPGGVGPKGQRGDRGLPGITGVQGTKGDPGYPGDPGLNGQKGS
PGNPGQEGPRGFPGSARGSPGFPGNPGQRGPPGLPGSPGSPGPAGPKGFPGLTGLNGLPG
TKGSPGKQGLNENGLPGPAGIPGVKGQRGEPSFHFGASGLRGPKGPAGEIGLPGSPGATG
VRGPPGTSVPSDIPGKPGDAGRPGEDGLPGFQGPPGPPGPPGPAFNQGDRGNPGPTGPSG
FSGLKGNAGIPGFSGPPGESGFKGFRGDPGFIGKPGQDGPAGDPGFLGPKGKAGRPGFPG
LQGSPGLTQTPEDIRAPPGLMGLPGNDGNPGLNGDPGFQGQTGSQGPKGKAGIPGQVGIN
GLPGSPGMVGDPGSPGTLGLPGFEGRPGNPGLAGLPGMPGRSIGVGYTLVKHSQSDQIPP
CPVGMNKLWEGYSLLYVKGQDKSHNQDLGFAGSCLPRFSTMPFIYCNIDEVCYYASRNDK
SYWLSTTAPIPMMPVSSYQIAQYISRCSVCEAPSQAVAVHSQDITIPQCPEGWRSLWIGY
SFLMHTAAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFSNKYSFWLTTVEATNQF
AESPISETLKAGQLQTRVGRCQVCMKNL
NT seq 5127 nt   +upstreamnt  +downstreamnt
atgttcgccggcgcgcccgtcttggtaattgccctgtgcctggcagcgcgtcccgtccgt
gggggcgggaagaaattttatcatggaatctgtgggggccgcgattgtacagccggctgc
aagtgcttcccggagaaaggggcacggggtcaaccagggctaatcgggaaccaaggacca
atgggcattgaaggctttactggaccagagggagtgagaggactgaaaggagagaggggt
gtaacaggtcctacaggtgcagctggaatgaagggagacaagggcccaatgggtgttcct
ggattccctggaatttatggagttccgggacaccccggtcagccaggatccagaggtctt
cctggtttagatggctgtaatggtaccattggaagtcctggtacctccggatcagatgga
ttgcctggtctccaaggaccaccgggtcgtcctggtcctaaaggtccaaaaggtgaacct
gtttatgccccggaaatttttagaggagtgaagggagaaagtggtcttcctggactggat
ggtgctattggaccaaaaggttttccaggccgaccaggtcctgctggccccatcgggcta
cctggatttccgggaccaccaggtttcccaggtcccgcgggacctgtgggcagtagcaat
ctagttttccagggagaaaaaggagaaaaaggagatgtgggactgccaggactagcagga
cctccatcttccacagggacagaagaatatgttggagtgtccaaaggacagcgaggagca
aagggagttcctggccccaaaggaattccaggcctaccaggagttcctggacgtccgggt
ttctggggctttggagaaaagggagaaaaaggcatccctggtttaccaggacccagggga
gacatgggacagaggggaccggaaggaagcataggcagaaagggggtcctgggcgaatcg
ggatttcccggttgggatggatcaccaggcaaaaagggtgactttggcgatgtgggtcca
ccaggccttccaataattgttgacacaagtggtgccatcatatcaggtccccctggagaa
cccggcacaccaggaaaccctggatctagaggagatggggggactattggtttgccagga
tttcctgggcaaccaggacgaactccaacctttccaggtcccccaggttcaatgggcatc
ccagggatctcaggagttaaaggtgaccgaggagaaccaggaaggaccacagttggatct
ccaggcctacctgggaaagatggagctccagggttaccaggacctccagggttaccaggt
gcttcagatacagcatacccagcaggtgcaatccttagaggagaacctggggaaccaggt
attcccggaccaaggggccccccaggaatctttggcttaagaggatataaaggggaaggt
ggtgattgtgcctgtgatggaggaatcacgagaataggcttgccaggagagtcaggcaac
cctggtcaacctggaggacaaggtgatgttgggccaaaaggatccgtgggggatccagga
gatggtatactaggtccccctgggccacccggtttcccaggtcaacctggtcttccaggc
attaaaggacaaaaaggggaaccatcttcagtctcaggcagaggacctcgaggagatcca
gggaatattggactcaggggtccttcagggccacctggaactcctggtagggatggtgtg
caaggtgtcccaggtcaacatggtcctccgggtgatgatggatttggctacccgggggac
aaaggtttccctggtttagctggtgcaaaggggaagcgtggtgaaattggcctacctggc
attggttttccgggaccaaatggaagctttggacctagaggtgatccagggatcagtggc
attccaggacaacctggcccaccagggccgccaggtgattgctgctgcggtgaggaggtt
ggtaatggagacttagacgctcagggaggagaagctgtgccatgcataatccctggaatc
gtgggtccacctggacttccgggactttcaggattaccaggttccaagggtagcaaagga
ttccctggtttttcagggcagccaggttcaattggcttaaaaggagagccaggcacacct
ggagaggctcggttcccaggaatgccagggtttcctggccctcgtggagatccaggttca
aaaggactaccaggaattgatggggcggatgggctgcctggtccagaaggctgtcctggt
gtggttggtccaaatggatcccctggtgatgtgtttggggctgaaccaggatcccgagga
gaacctgggccacctggcttaccaggagataaaggctttcctggagattttggctttcct
ggaacaccaggtctggatggaaagcctggcctgccaggtagaaaaggaggatttggagaa
ccaggtcttccaggctttgatggaccgccaggaccgccaggaccaggaggtccatttggc
atcaaaggaaaaccaggtccgttgggaacaatcggccttccaggatcacaaggctgccaa
gggcttcctggaacaaaaggaccaagaggagatgctggttcaccaggtcccgccggcatg
aaagggctcccagggcttaatggaaggccaggagaggctggagaacgaggattgcctgga
cctccgggtctctggggcccagacggaactccaggttttcccggctcaaaaggtgaaaag
ggctcgttgggcgtgattggctttcccgggatgccaggcccacctgggcttcctggcgtg
gatggcctccaaggaacgtctggtgaaccaggaagaagtggaagccctgggttttctggc
ttccctggcctcaaaggggacagaggtgtccatggtcctcctggccctcccatttccata
cccccagaggtggccctccgattcaaagggaataaaggagattctggactggttggacag
agagggtatccaggaccaagagggggaaaaggagctcctggggtccgggggcagccggga
cttccaggaagatccggatcgccatctagggagaaaggacagccaggagagccaggtttt
ccaggaacgtttggtcgtcctgggttattgggacaaaagggatctggtggcatctcaggc
tttcctggaatgcctgggggaagaggtgctgaaggtataccaggctcactggccccccca
ggaattaacggattgcgtggtccaaaaggtgaccgaggggaaacccgaggaatcccaggt
ggtgtgggacctaagggccaacgaggggaccgagggcttccaggtatcacaggtgtccaa
ggaacaaaaggtgacccaggatacccaggagatcctggactaaatggacagaaaggttca
ccaggaaaccctggacaagaaggaccaagaggctttcctggatctgcgagaggcagccca
ggttttccaggtaatcctgggcaacgtggacctccaggattgcctggatctcctggatct
cctggccctgcaggaccaaaaggatttccaggactgactggcctaaatggtttacctggc
actaagggctcacctggaaaacaaggcctgaatgaaaacggactccctggaccggcagga
attccaggtgtcaaaggtcaacgaggtgaacccagtttccactttggagcttctggtctt
cgtggaccaaaagggcctgcaggagaaataggtcttcctgggagcccaggtgccactggt
gtgcgaggcccccctggcacctctgtgccttcagacattcctggaaagcctggtgatgct
ggacgtcctggagaagatgggctgccaggcttccaaggacctcctgggccaccaggacct
ccgggcccagccttcaatcaaggtgatcgaggtaatccaggccccaccggtccttctggc
ttctcaggcctcaaaggcaatgcaggcatccctggatttagtggaccccctggagaatca
ggtttcaaaggattcagaggggacccaggtttcataggaaagcctgggcaagatggaccg
gcaggtgatccaggtttccttgggccaaagggcaaagcaggccgtccaggttttcctggg
ctgcaaggatctccaggcttaacccaaacaccagaagatatcagagctcctcctggctta
atgggattgcccggaaatgatggcaaccctggtttaaatggagaccctggcttccagggg
caaactggatcacaaggtccaaaaggaaaggcaggcatacctggccaggtgggaatcaat
ggcttaccaggttctcctgggatggtaggagacccaggttctccaggaactctggggcta
ccaggatttgaaggacgtcctgggaatccaggtctggctgggctgccagggatgccaggg
cgtagcattggagtgggctataccttggtgaaacatagccagtcggaccagattccaccc
tgtccggtgggcatgaacaaactctgggaaggttacagtttgctctatgtgaaaggccag
gacaagtcccacaatcaagatctgggttttgctggctcctgcctgcctcgcttcagcacg
atgccttttatttattgcaacatcgacgaagtgtgctactacgccagccgcaatgataaa
tcatattggctttccaccacggctccaatacccatgatgcccgtcagcagctaccaaatc
gcccagtacatcagtcgctgctcagtgtgtgaagcaccgtcccaagctgtggctgtccac
agccaggacatcaccatcccacaatgccccgaaggctggcgcagtctctggattgggtac
tccttcctcatgcacacggctgccgaaggcggtggccaatccctggtctcccccggatcc
tgcctggaggacttccgtgccacccctttcattgagtgcaacggtgcccgaggaacgtgc
cattacttttccaacaagtacagtttttggctgaccacagtggaggcgaccaatcaattt
gctgagtctcccatctccgaaacgctgaaagcgggtcagctccagacacgggtgggacgg
tgccaagtctgcatgaaaaatttgtag

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