Protobothrops mucrosquamatus (Taiwan habu): 107303151
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Entry
107303151 CDS
T05763
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04382
Cornified envelope formation
pmur04510
Focal adhesion
pmur04512
ECM-receptor interaction
pmur04518
Integrin signaling
pmur04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107303151 (COL4A5)
04518 Integrin signaling
107303151 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107303151 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107303151 (COL4A5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107303151 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmur04147
]
107303151 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
pmur00536
]
107303151 (COL4A5)
Exosome [BR:
pmur04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107303151 (COL4A5)
Glycosaminoglycan binding proteins [BR:
pmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107303151 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107303151
NCBI-ProteinID:
XP_029138764
LinkDB
All DBs
Position
Unknown
AA seq
1707 aa
AA seq
DB search
MKLRPGARRLLLLLALGLGAWDAQAAVGLARLPSDAPGGESGAGRACHGCSKSTTCDCSG
HKGEKGDRGFPGLEGQPGLPGFPGPEGPAGSRGEKGDGGFPGATGPKGIRGPPGLPGFPG
TPGLPGLPGQDGPPGLQGIPGCNGTKGERGFPGNSGFPGLPGPPGPAGLLGMKGEKGDII
TSPLPGQKGDPGFPGPPGIQGSAGPPGVEGPFGPPGPRGLTGPPGPPGLPGPKGNMGVNF
QGYKGEKGEQGLQGPPGPPGQIGEQTGNNDIVFQKGDQGVAGDPGPPGPPGPSGLPGPSG
GGKGEKGEQGEPGKRGKPGKDGDPGLTGLPGSPGDPGMHGIPGRDGEKGQKGETGLTGPP
GQVIPRPDTGTTVGPKGSKGFAGYPGSKGDRGYPGSPGPPGLPGTPGVARVGPPGPPGLS
GERGQKGDQGLPGIAIPGQPGIDGQPGRPGPPGPRGPPGSTIPPAGLICERGLPGPEGTR
GDQGFPGERGQKGDKGDTCFNCIGSGIPGPPGQKGFPGLPGDPGSPGLPGSKGDKGVSGV
IGFIGPQGPPGPQGSLGRPGAKGDPGDMIGFPGMKGEKGNSGFPGPPGLPGLDGSPGKDG
IRGYPGSKGEPGSIAFKGDRGPTGDSGLPGLSGERGPPGPPGFGPQGPPGDKGLQGVPGR
PGSPGAPGPKGEPAQSIPEKGPPGPPGPPGRNGEDGFPGDSGQPGSPGLPGIPGQKGEPG
FPGIGLPGPPGPKGFPGVSGEPGLPGNSGRPGADGTPGLPGAKGQKGERGFGVPGPTGPP
GPPGFKGAQGAKGVPGFSGNPGSPGQPGFDGAVGAKGDTGPRGQPGLVGPPGIPGAGGQG
PPGPPGLPGPAGPPGVQGIPGMKGDPGPPGFDVPGPPGDRGNPGFSGSPGLPGGPGSPGS
PGRDGTPGIPGSKGEMGVMGAPGPQGTSGSPGRNGFPGSKGNDGLSGQPGQPGLAGQKGS
KGEPGLPGVPGKFDVNLLGSKGEKGEPGEKGNLGLTGQKGYLGLPGDPGPAGSVGQPGAA
GLPGPKGDTGILGPPGPAGPPGLKGANGEMGLPGPTGSKGSQGIPGRPGQAGSPGSPGLK
GDRGDPGISGIGIPGPPGPKGESGLPGYSGSPGAKGSFGNPGLPGSTGRPGAKGEPGFPG
SPGTPGVAGPKGFDGSAGSPGDPGPPGLPGEFGRPGSPGLLGGKGQPGQDGIPGPAGQKG
EPGQPGFGLPGPPGLQGLAGQKGDSGFSGPPGPPGPPGLKGEMGAKGYPGNQGLEGPPGV
PGRASEGPKGNPGSPGIPGRPGPPGLSGPEGPPGPPGIGGVKGEKGNSGQPGQPGLPGLK
GDQGTPGESVSEKWEGPKALDVYPVLTCVGFGFSGMKGPTGPLGPAGPEGDPGPFGSPGP
PGIPGPAGKTIVIKGDQGPPGLPGQPGMKGLSGLPGPPGLPGSIGLPGDFGHDGLPGFDG
PVGRKGERGLPGQPGLRGSHGPPGPDGLQGPPGQPGTGSVAHGFLITRHSQTTDSPFCPP
GTSRIYDGFSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYW
LSTPEPMPMSMEPLTGKNIQPFISRCTVCEAPAMVIAVHSQTIQIPSCPQGWNSLWIGYS
FMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEISEMF
NKPQSETLKAGDLRARISRCQVCMKRT
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgcccgggcgcccgtcgcctcctcttgctgctcgccctgggactcggcgct
tgggacgcccaggctgcggtgggtcttgctcggctcccttcggatgcccccggaggggag
agcggggcgggcagggcgtgccatgggtgttccaaaagcactacgtgtgactgcagtgga
cataaaggagaaaagggtgatcgaggtttcccaggtttagaaggccagcccggtttgcct
ggattccctggcccagaaggaccagctggatcccgtggcgagaagggtgatggtggattt
ccaggggctacaggacccaaaggcattcgaggtcctccagggttaccaggttttccggga
acaccagggcttcctggactgcccggtcaggatggacctccagggctccaaggtatccca
ggatgcaatggaacgaagggagaacgtggttttccaggcaactcgggtttcccaggtttg
cctggacctcccgggcccgccggtttgctaggaatgaagggtgaaaaaggagatattatc
acctctcccctccctggacagaaaggtgatccaggatttcccggtccacctggaattcaa
ggctctgccggtccccctggtgtagaaggtccatttggtcctcccggaccccgaggtttg
acgggtcctcctggtcccccaggactgccaggtcctaagggcaatatgggcgtgaatttc
caaggatacaaaggagaaaaaggtgaacagggacttcaaggacccccagggccaccagga
cagatcggcgaacagacgggaaataatgatatagtatttcaaaaaggagatcagggtgtt
gcaggtgacccaggccccccagggcctccggggccctccgggcttcctggcccttctggg
ggtggaaaaggtgaaaaaggtgagcaaggagaaccaggcaaaagagggaagccaggaaaa
gacggggaccccggattgacaggtttgcctggttctcccggtgatcctggcatgcatggc
atcccgggaagagatggagagaaaggtcaaaaaggagaaactggtttaactggcccacct
ggacaggtgattccaaggccggatactggtacaacagtgggaccaaaaggtagcaaaggt
tttgcgggctatcctggaagcaaaggagatcgtggttatcctggctccccgggccctcct
ggtttaccaggcaccccaggagttgcaagggtaggtcctcctggtccacctggattatct
ggtgaaaggggacagaaaggggatcagggccttcctgggatcgctataccaggacagcca
ggaattgatggtcaaccagggcgcccaggaccaccagggccccggggaccaccagggtca
accattccacctgctggtctgatttgtgaacgaggacttcctggccctgaaggaacccga
ggagaccaaggatttccaggggaaagaggccagaaaggtgacaagggtgacacctgcttt
aactgcataggaagtggcatcccgggccctccagggcaaaaaggctttccggggctccct
ggagatccagggtctcctggtcttcctgggtcaaaaggtgacaaaggcgtttctggtgta
attggatttattgggcctcaaggtcctcccggaccccaaggttctcttggacgtcctggt
gctaaaggtgatccaggtgacatgattggtttccctggaatgaaaggtgaaaagggaaat
tcaggtttcccaggtcctccagggctgcccggcttagatggttctccggggaaagatgga
atccgaggttatcctggatccaagggcgagccaggtagcattgctttcaaaggagaccgg
ggccctactggggattcaggtcttcctggactcagtggagagcgagggcctccaggacct
cccggatttggaccacaaggtcctccaggagacaaggggctgcaaggcgttcctggacgt
ccaggttccccaggagctccagggcccaaaggcgaacctgctcaatctattcccgaaaaa
ggacccccggggcctccaggccccccaggcagaaatggtgaagatggttttccaggagac
tctggtcaacctggatcgcctgggttgccaggaatccccggccaaaaaggtgaacccggc
ttccctggcattggactcccaggcccaccagggcccaaaggttttcccggtgtatcaggt
gaacctggacttccaggaaactctggaagacccggagctgatggaacccctggacttcct
ggagcgaaaggacaaaagggagagcgaggatttggcgttccaggacccacagggccacct
gggccaccaggtttcaaaggagcgcaaggtgccaaaggagtgcccggcttctcaggaaat
cctggctccccaggacagccaggttttgatggagctgtcggagctaaaggtgatacagga
ccacgtggccagcctggactagttggacctccagggattccaggagctggtgggcaagga
ccacctggaccacctggtcttccaggaccagcaggaccaccaggagttcaaggcatccct
ggtatgaaaggtgatcctgggccaccaggatttgatgttcccggtcctccaggtgacagg
ggcaacccaggtttttctggatcacctggtcttccaggtggaccaggttcccctggttct
ccaggacgagatggaactccaggcataccaggaagcaaaggcgagatgggagtgatgggg
gcacctggtcctcagggaacatctggatctcctggcagaaatggctttcctggctccaaa
ggcaatgatggtttatcaggacaaccaggacaaccaggacttgccggacaaaaaggcagc
aaaggggaacctggtttgccaggagttccgggaaaatttgatgttaacctattgggttcc
aaaggagaaaagggggaacctggagagaaaggtaaccttggtctgaccggtcagaagggt
tatctaggcctcccaggtgacccagggcccgctggatcagttggacagccaggtgcagct
ggattgccaggtcccaaaggagacactgggattctaggcccccctggaccagctgggcct
ccaggacttaaaggtgccaacggcgagatgggcctgccaggtcccactggctcaaaaggt
tcacaaggcatcccagggcgtcctggccaggctggttctcctggatcacctggactgaag
ggagacaggggcgatcccggtatttcaggcatcggtattccaggtcctcctggccccaag
ggtgaaagcggactgcctggttactctggttctccaggcgctaaagggtcctttggaaat
ccggggttgcctggctcgacaggcaggccaggagccaaaggtgaacctggctttcctgga
tccccagggacaccaggcgttgcaggaccaaaaggttttgatggatctgcaggaagccca
ggtgatccagggccacctggacttccaggtgaatttggtcgccctggctctccaggcctt
ctggggggaaaaggacaacctgggcaagatggcatccctggaccagcagggcagaaaggt
gaaccaggtcaaccaggatttggacttcccggacctccaggcctccaaggactcgcaggt
caaaagggagattcaggcttctctggacccccagggcctccaggaccccctggtttaaaa
ggagaaatgggcgccaagggatatcctggcaaccagggcttagaaggtcctccaggagtt
cctgggcgagcatcagaaggacctaagggtaaccctggatctccaggcatcccaggacgg
ccaggtcctccaggtctttctgggcctgagggacctcctggaccacccgggattggagga
gtgaaaggagaaaaaggaaactctggccaacctggtcagcctggactgcccggactgaag
ggtgatcaggggacacctggagagtcggtaagtgaaaaatgggaggggccaaaagctctt
gatgtctaccctgtattaacttgtgtgggttttggcttttcaggtatgaagggacctact
ggacctttgggacctgctggccctgaaggagaccctggaccctttggctccccaggtcct
ccaggaatacctggcccggctggaaaaacaattgtgattaaaggtgatcaaggaccacct
ggtcttccaggacaacctggaatgaaaggtctatctggacttccaggacctccaggtttg
ccaggttcaattggtcttcctggtgactttggacatgatggccttcctggttttgatggt
ccagtggggcgtaaaggggagagaggactcccaggccagccaggtctacgtggttcacac
ggaccccctggccctgatggattgcaaggtcctccaggacagccaggaacaggttcggtt
gcccatggattcctcataactcgccacagccaaaccaccgacagccccttctgcccaccg
ggaaccagccggatctatgatggattttcccttctctacgtacaaggaaacgagagagct
cacgggcaggatctgggcactgctggcagctgtctccgccgtttcagcaccatgcccttc
atgttttgcaacatcaacaacgtctgtaactttgcatccaggaatgactactcttactgg
ctttctactcctgagccgatgccaatgagcatggagcccctaactggaaagaatatccaa
ccttttattagccgttgcacagtctgtgaagctcctgcgatggtcatagcagtccacagc
cagaccattcagatcccctcgtgtccacagggctggaattcgctatggatcggatattca
ttcatgatgcacaccagtgcgggagccgaaggatccggacaggccttggcttctcctggc
tcctgccttgaggaattccgctcagctccctttattgagtgccacggccgagggacctgc
aactattacgccaattcatacagtttttggctggccactgtggaaatatcagaaatgttt
aataaacctcaatcggagactcttaaggctggcgacctccgggcccgtatcagtcgatgc
caagtttgcatgaagaggacgtaa
DBGET
integrated database retrieval system
