Paracoccus mutanolyticus: DPM13_00260
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Entry
DPM13_00260 CDS
T05551
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmut
Paracoccus mutanolyticus
Pathway
pmut03030
DNA replication
pmut03430
Mismatch repair
pmut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DPM13_00260
03430 Mismatch repair
DPM13_00260
03440 Homologous recombination
DPM13_00260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmut03032
]
DPM13_00260
03400 DNA repair and recombination proteins [BR:
pmut03400
]
DPM13_00260
Enzymes [BR:
pmut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DPM13_00260
DNA replication proteins [BR:
pmut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DPM13_00260
DNA repair and recombination proteins [BR:
pmut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DPM13_00260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
Motif
Other DBs
NCBI-ProteinID:
AWX92265
LinkDB
All DBs
Position
complement(56145..59615)
Genome browser
AA seq
1156 aa
AA seq
DB search
MAENTPRFIHLRTHSEHSLLEGAVPVKKLPDLAAQNGMPAVALTDTNALFAALEFSVKAQ
DYGIQPIVGCQVTLAADVTAPIVLLAQNEAGWLNLMALSTCLYLRDGGALPHVTVDELEA
HAEGLICLTGGPLGPVGLLVAQGRQPEARALVERLAAAFPTRLYVELQRHHDAEGRPLPE
EQAAEGGMIDIAYDLGLPLVATNDVYFPKSDLYAAHDALICISERAYVDQTAPRRRLTPQ
HYFKSQAEMATLFADLPEAIENTVEIARRCAFAVSKRKPILPRFADDEVEELRRQAWEGL
RARLAIIPHAVPVEEYEERLRFELGIIEQMGFPGYFLIVADFIKWAKDHGIPVGPGRGSG
AGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIQYVQEKYGRD
KVGQIITFGALLSKAAVRDVGRVLQLPFGQVDRLSKMIPVEGVKPVSVTKALADEPRLRE
AAKEEVVGRLLDYAAKLEGLLRNASTHAAGVVIGDRPLHRLVPLYRDPASDMPATQFNMK
WVEQAGLVKFDFLGLKTLTVIQNAVDLINGGGRPLHVAADGRVLYEPAKGAENQINLIPL
DDKASYDLFASARTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPMENIPTYCE
VKNGLRPLESLHPTIDPILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKKIAE
EMAKERPKFVEGCKKQGIDAKKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKANH
PVEFMAAVMNCDIHLTDKLAVYKREADRMGIETVPPCVNRSLATFSVRDGRIHYALGALK
GVGAEAMKLITEARGDRPFRDMLDFARRVDMKRVGKRPLEMLARAGAFDCLEENRCKVLK
SLDGLVAWSAAVQEAAASSQSSLFGGGEDLPPPRPVTAPVWLPTEKLAEEHAAIGFYLSG
HPLDDYLPALRRKNVQTLAEVTQAALDGALVASLAGTVAFRAEKKSARGTRFAFVGLSDP
TGMYEVTVFSDTLDAHRQHLEPGANVVLQVQVEPSGEQVKLLARSVTPLDQAVADAGANR
LAVEIAGLDAVPMIAEALARIQTEVNAPSRARGPITLRLKDGEDLVDIEITEDAPLTTPA
RQALRVIPGVLEVLEE
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaacaccccccgattcatccacctgcgcacccattccgagcattccctgctg
gagggggcggtgcccgtgaagaaactgcccgatctggctgcgcaaaacggcatgccggcc
gtcgccctgaccgacaccaacgcgctgttcgcggcgctggagttttccgtcaaggcgcag
gattacggcatccagcccatcgtgggctgccaggtgacgctggccgctgacgttacggca
cccatcgtcctgctggcgcagaacgaggcaggctggcttaatctcatggcactttcgaca
tgcctttacctgcgcgacggcggcgcgctgccccatgtcacggtcgacgaactcgaggcc
catgccgagggcctgatctgcctgaccggcggccccctgggtccggtcggcctgctggtc
gcccagggccgccagcccgaggcccgcgcgctggtcgaacggctcgccgccgcctttccg
acccggctttacgtcgaactgcagcgccaccacgacgccgagggccgcccgcttcccgaa
gagcaggcggccgagggcggcatgatcgacattgcctatgacctgggcctgccgctggtt
gcgacgaacgacgtctatttcccgaaatcggacctttacgccgcccatgacgcgctgatc
tgcatttccgaacgggcctatgtcgaccagaccgcgccgcgccgccggctgacgccgcag
cattacttcaagtcgcaggcggaaatggcgacgctgttcgccgacctgcccgaggcgatc
gaaaacaccgtcgaaatcgcccgccgctgtgcctttgccgtcagcaagcgcaagccgatc
ctgccgcgtttcgccgatgacgaggtcgaggaattgcgccgccaggcctgggagggcctg
cgcgcgcgtctggccatcatcccccacgcggtcccggtcgaggaatacgaggaacgcctg
cggttcgaactgggcatcatcgagcagatgggctttcccggatatttcctgatcgtggcc
gatttcatcaaatgggccaaggaccacggcatcccggtcgggccggggcggggctcgggc
gcgggttcgctggtggcctatgcgctgaccatcaccgacctcgaccccttgcgctacagc
ctgctgttcgaacgcttcctgaacccggagcgggtgtcgatgccggacttcgacatcgac
ttctgcatggatcgccgcgaggaggtgatccagtatgtccaggagaaatacggtcgcgac
aaggtgggccagatcatcaccttcggcgcgctgctgtccaaggccgcggtgcgcgacgtg
ggacgcgtgttgcaactgccgttcggccaggtcgaccgcctgtccaagatgatcccggtc
gaaggggtcaagcccgtaagcgtgaccaaagcccttgcggacgaaccccggctgcgcgag
gccgcgaaggaagaggtcgtgggccggctgctggactatgcggccaagctggaagggctg
ctcaggaacgcctcgacccatgcggcgggggtggtgatcggggaccggccgctgcaccgg
ctggtgccgctttaccgcgacccggcgtccgacatgccggcgacgcagttcaacatgaaa
tgggtcgaacaggccgggttggtcaagttcgacttcctgggcctgaagaccctgacggtc
atccagaacgccgtcgatctgatcaacggcggcggccggccgctgcatgtcgccgccgat
gggcgcgtgttgtacgaacccgccaagggggccgaaaaccagatcaacctgatcccgctg
gacgacaaggccagctatgatctgttcgccagcgctcgcaccgtcgccgtgttccaggtg
gaaagctcgggcatgatggacgcactacgccgcatgaagccgacctgcatcgaggacatc
gtcgctctggtcgcgctttatcgtcctggcccgatggagaacatcccgacctattgcgag
gtcaagaacgggttgcggccgctggaatcgctgcacccgaccatcgatccgatcctggcc
gagacgcagggcatcatcgtctatcaggaacaggtgatgcagatcgcccaggtcatggcg
ggctattctctgggcggcgcggacctcttgcgccgcgccatgggcaagaagatcgccgag
gagatggccaaggagcggccgaagttcgtcgaaggctgcaagaagcagggaatcgacgcg
aagaaagccggagaggtctttgaccttcttgagaaattcgcgaactacggcttcaacaag
tcgcatgccgcggcctatgcggtcgtcagctatcagaccgcctggctgaaggccaaccac
ccggtcgagttcatggccgcggtgatgaactgcgatatccacctgaccgacaagctggcc
gtctacaagcgcgaggccgaccgtatggggatcgagacggtgccgccctgcgtcaaccgc
tcgcttgccaccttcagcgtgcgggacgggcgcatccactatgccttgggcgcgctcaag
ggcgtgggggccgaggcgatgaagctgatcaccgaggcacggggcgaccggcccttccgc
gacatgctggattttgcccggcgcgtggacatgaagcgcgtgggcaagcgcccgctggag
atgctggcgcgggcaggggcctttgactgcctcgaggaaaaccgctgcaaggtcctgaaa
tcgctagatggtctggtcgcctggtcggcggcggtgcaagaggccgcggcctcgtcccag
tcctcgctgttcggtgggggcgaggatctgccgccgccccgtccggtgaccgcgccggtc
tggctgccgaccgaaaagctggccgaggagcacgccgcgatcgggttctacctgtcgggc
catccgctggacgattacctgccggcgctgcgtcgcaagaacgtccagaccttggccgag
gtgacgcaggccgcgcttgatggggcgctggtcgcctcgctggccggcacggtggccttc
cgggcggaaaagaagtccgcgcgcggcacgcgctttgccttcgtcggcctgtccgacccc
accggcatgtacgaggtgacggtgttttccgacacgctggacgcccaccgccagcatctg
gaacccggcgcgaacgtggtgcttcaggtgcaggtcgagccttcgggcgagcaggtcaag
ctgctcgcgcgctcggtcacgccgctggatcaggcggtggccgacgcgggcgcgaaccgg
ctggcggtggaaatcgccggcctcgacgccgtgccgatgatcgccgaggcgctggcccgc
atccagaccgaggtcaacgccccctcgcgcgcccgcggccccatcaccctgcggctgaag
gacggcgaggacctggtcgacatcgagatcaccgaggatgcgcccctgacgacgccggcg
cgccaggcgctgcgcgtcatcccgggggtgctggaggtgctggaggaatag
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