Paracoccus mutanolyticus: DPM13_02600
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Entry
DPM13_02600 CDS
T05551
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmut
Paracoccus mutanolyticus
Pathway
pmut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DPM13_02600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmut03400
]
DPM13_02600
Enzymes [BR:
pmut01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DPM13_02600
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DPM13_02600
DNA repair and recombination proteins [BR:
pmut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DPM13_02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AWX92491
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All DBs
Position
454723..455568
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AA seq
281 aa
AA seq
DB search
MPELPEVETVRRGLLPHLEGHVLARAEARRPDLRWPLPPDLVQVLTGARVTALRRRSKYI
LADLEERGTLLLHLGMSGRMLIEGQSQGEFHRDPAILPRHDHVVLWTDQGTRITFNDARR
FGMVDLIAPGAAHPLLAHLGPEPLGPDFTPDVLARALAGRRTPIKAALLDQRIVAGLGNI
YVSEALHRAGIDPRRLAGRIGAARIAALVGHIRDVLDEAIAAGGSSLRDHRQASGELGYF
QHSFRVYDREGAPCPRPACPGTIRRIVQSGRSSFYCPACQR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactgcccgaggtcgaaaccgtccgccgcggcctgctgccgcaccttgagggg
cacgtccttgcgcgcgccgaggcgcgccgtcccgacctgcgctggccgctgccgccggac
ctggtgcaggtgctgaccggcgcccgtgtcacggcgctgcggcggcggtcgaagtacatc
ctggccgacctggaggagcggggcacgctgcttttgcacctgggcatgtcggggcggatg
ctgatcgagggccagtcgcagggcgagttccaccgcgaccccgcgatcctgccgcgccac
gaccatgtggtgctgtggaccgaccaggggacgcgcatcaccttcaacgacgcgcggcga
ttcggcatggtggacctgatcgcgcccggagcagcgcatccgctgctggcgcatctgggg
ccagagccgctgggccccgacttcacccccgacgtgctggcccgcgcgctggccgggcgc
aggacgccgatcaaggccgcgctgctggaccagcggatcgtggcgggactgggcaacatc
tatgtgtccgaggcgctgcaccgggcgggcatcgacccgcgccggctggcgggccggatc
ggggccgcgcggatcgcggcgctggtcgggcatatccgcgacgtgctggacgaggccatc
gccgccggcggatcgtcgctgcgcgaccaccgccaggccagcggggagctgggctatttc
cagcacagcttccgggtctatgaccgcgagggcgcgccctgcccgcgccccgcctgcccc
gggaccattcgccggatcgtgcagtcgggacggtcgagcttttactgccccgcctgtcaa
cgttga
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