Paracoccus mutanolyticus: DPM13_04790
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Entry
DPM13_04790 CDS
T05551
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pmut
Paracoccus mutanolyticus
Pathway
pmut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DPM13_04790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmut03400
]
DPM13_04790
Enzymes [BR:
pmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DPM13_04790
DNA repair and recombination proteins [BR:
pmut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DPM13_04790
RecFOR pathway proteins
DPM13_04790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_16
RNA_helicase
AAA_14
AAA_2
AAA_3
TsaE
Rad17
AAA_33
AAA_17
AAA_28
nSTAND3
AAA_18
AAA_24
ABC_tran
Cytidylate_kin
NB-ARC
NACHT
NPHP3_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AWX94390
LinkDB
All DBs
Position
865362..866387
Genome browser
AA seq
341 aa
AA seq
DB search
MIQPDPMLRPEPIEGESEDRALRPQMLSDFVGQAEARANLRVFIESARMRGKAMDHTLFH
GPPGLGKTTLAQIMARELGVNFKMTSGPVLARAGDLAAILTNLEARDVLFIDEIHRMNPA
VEEILYPALEDFELDLVIGEGPAARTVRIELQPFTLVGATTRLGLLTTPLRDRFGIPTRL
EFYTIEELDLIVTRGARLLGVPSDPEGTREIARRARGTPRIAGRLLRRVIDFALVEGDGR
LTRQIADSALTRLGVDHLGLDTADRRYLTLMAEHYGGGPVGVETLSAALSESRDAIEEVI
EPYLMQQGLVARTPRGRMLARLGWRHLGLDVPRVQESLFDD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgatccagcccgaccccatgctgcgccccgagccgatcgagggcgaatccgaggaccgc
gccctgcgcccgcagatgctgtccgattttgtcggccaggccgaggcgcgcgccaacctg
cgcgtcttcatcgaaagcgcccggatgcgcggcaaggcgatggaccacaccctgttccac
gggccgcccggcctcggcaagacgacgctggcccagatcatggcgcgcgaactgggcgtg
aacttcaagatgacttcaggcccggttctggcccgggccggggacctcgcggcgatcctg
accaatctcgaggcgcgcgacgtgttgttcatcgacgagatccaccgcatgaacccggcg
gtcgaggagatcctctatcccgcgctcgaggacttcgaactggacctggtgatcggcgaa
ggcccagccgcgcgcaccgtgcggatcgagttgcagccctttaccctggtcggcgcgacg
acccggctaggccttctgacgacgccgctgcgcgaccggtttggcattccgacccggctg
gagttctacacgatcgaggaactggacctgatcgtgacccggggcgcccggctgctgggc
gtcccgtcggaccccgaaggcacgcgagagatcgcccgccgcgcccggggcacgccccgc
atcgccggtcgcctgctgcgccgggtgatcgacttcgccctggtcgagggcgacggccgc
ctgacccgccagatcgccgacagcgccttgacgcgtctgggggtggatcacttgggtctg
gacaccgccgaccgtcgctatctgacgctgatggcggaacattacggtggcggcccggtc
ggcgtcgaaaccctgtccgctgccctgtcggaaagccgcgatgccatcgaggaggtgatc
gagccctacctcatgcagcagggcctggttgcccgcacccctcgcggcaggatgctggcc
cggctgggctggcggcatctggggctggacgttccgcgcgtgcaggaaagcctgttcgac
gattaa
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