Paracoccus mutanolyticus: DPM13_04870
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Entry
DPM13_04870 CDS
T05551
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmut
Paracoccus mutanolyticus
Brite
KEGG Orthology (KO) [BR:
pmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmut03032
]
DPM13_04870 (topA)
03400 DNA repair and recombination proteins [BR:
pmut03400
]
DPM13_04870 (topA)
Enzymes [BR:
pmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DPM13_04870 (topA)
DNA replication proteins [BR:
pmut03032
]
Prokaryotic type
DNA Topoisomerases
DPM13_04870 (topA)
DNA repair and recombination proteins [BR:
pmut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DPM13_04870 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AWX92740
LinkDB
All DBs
Position
complement(880654..883239)
Genome browser
AA seq
861 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGDDYTVLASFGHVRDLPPKDGSVDPEADFAMKWEVAADSRK
HVKAIKDALASDPNLILATDPDREGEAISWHLLETLAPALKKGAEVSRVTFNAITKNAVT
EAMANPRQIDQPLVDAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVALRIIVDRE
MEIEAFKPREYWSVHARLATPRGDEFDATMTVFGGKKLERFDIADGETAQLAVAAIQSRD
LSVASVQAKPASRNPWPPFMTSTLQQEASRKLGLGARACMSAAQRLYEAGHITYMRTDGI
DMAPEAVMAARDAIKARFGAEYLPKSPRMYKNKAKNAQEAHECIRPTDMMLSPDRLPVAD
KDQKALYDLIWKRTIASQMESARMERTTVEIASPDGQVGLRATGQVMLFDGFLRVYDQGR
DDEDEDDGRRLPLIQEGEATEKRSVTPEQHFTQAPPRYTEATLVKRMEELGIGRPSTYAS
IVTTIQDRDYVRKEQNRLIPEDKGRLVTIFLQKYFPRYVSYDFTANLEGELDDISSGERA
YREVLRRFWRDFTAALEGTSELRIGEVLEAIDEALAPHLYPPRADGGDPRECPLCHKGRL
HLKTARSGGAFIGCTNYPECRFTRPISSPDAEIVGDAVLGEDNGDQISLKNGRFGPYVQR
GEATAENPKPPRASIPKGWDLASVDLDRALALLALPREIGPHPEDGVPVEAGIGRYGPYV
KHGAKYANLPDVDEVFTIGMNRAVEVLAQKATRGRAAPAAPLAELGEHPEGGPVQVLAGR
YGPYVKWGKVNATLPRDLEPGAVTLERALELIAEKAGKSGRKPAKKPAAKAEKAPAKKAT
AKKPAAKKPAATKKAGARKAE
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgtcgtcgttgaatctccggccaaggccaagacgatcaataaatacctgggc
gacgactatacggttctggcgtccttcggccatgtccgcgacctgccgcccaaggatggc
agcgtcgatcccgaagccgatttcgccatgaaatgggaggttgcggcggatagccgcaag
cacgtcaaggcgatcaaggatgcgctggcaagcgacccgaacctgatcctggcgaccgac
cccgaccgcgagggcgaggcgatctcctggcacctgctggagacgctggcgccggccctg
aagaagggcgccgaggtcagccgcgtcaccttcaacgccatcaccaagaatgccgtgacc
gaggccatggccaacccgcgccagatcgaccagccgctggtcgatgcctatctggcgcgc
cgcgcgctggattacctcgtcggcttcaacctgtcgccggtcctgtggaggaagctgccc
ggcgccaagtcggccggccgggtgcagtcggtcgccctgcgcatcatcgtcgaccgcgag
atggagatcgaggccttcaagccccgcgaatactggtcggtgcatgcccgcctggccacc
ccgcgcggcgatgagttcgacgccaccatgactgtcttcggcggcaagaagctggaacgc
ttcgacatcgccgacggggaaaccgcgcagctggccgtggccgcgatccagtcgcgcgat
ctgtccgtcgccagcgtccaggccaagccggccagccgcaatccctggccgcccttcatg
acctcgaccctgcagcaggaagccagccgcaagctgggcctgggggcgcgggcctgcatg
tcggcggcgcagcggctctatgaggccggccacatcacctatatgcggaccgatggcatc
gacatggcccccgaggccgtcatggccgcccgcgacgcgatcaaggcccgtttcggcgcg
gaatacctgccgaagagcccgcgcatgtacaagaacaaggccaagaacgcccaggaagcg
cacgagtgcatccgcccgaccgacatgatgctgtcgcccgacaggctgccggtcgcggac
aaggaccagaaggccctgtatgacctgatctggaagcgcaccattgccagccagatggaa
tcggcacgcatggagcgcaccacggtcgagatcgccagccccgacggccaggtcggcctg
cgtgccaccgggcaggtgatgctgttcgacggcttcctgcgtgtctatgaccagggccgc
gacgacgaggacgaggatgacggccgccgcctgccgctgatccaggaaggcgaggcgacc
gaaaagcgcagcgttacccccgagcagcatttcacccaggcacccccgcgctataccgag
gcgaccctggtcaagcgcatggaagaactgggcatcggccggccctcgacctatgccagc
atcgtgacgacgatccaggaccgcgattacgtccgcaaggaacagaaccgcctgatcccc
gaggacaagggccggctggtcacgatctttctgcagaaatacttcccgcgctatgtcagc
tacgactttaccgccaacctggaaggcgagctcgacgacatcagctcgggcgagcgcgcc
taccgcgaggtgctgcgccgcttctggcgggacttcaccgccgcgctggaaggcaccagc
gaattgcgcatcggcgaggtgctggaggccatcgacgaggccctggcgccgcatctctat
ccgccgcgcgccgatggcggcgacccgcgcgaatgcccgctctgccacaaggggcggctg
catctgaagacggcgcgctcgggtggggccttcatcggctgcaccaactatccggaatgc
cgcttcacccgtccgatcagcagccccgatgccgagattgtcggcgatgccgtgctgggc
gaggacaacggcgatcagatcagcctcaagaatggccgcttcggtccctatgtgcagcgg
ggcgaagccacggccgagaaccccaagccgccccgcgcctcgatccccaagggctgggac
ctggcctcggtcgatctggaccgggcactggccctgctggccctgccgcgcgagatcggc
ccgcaccccgaggacggcgtgcccgtcgaggccgggatcggccgctacggcccctatgtg
aagcatggcgcgaaatacgcgaacctgcccgatgtggacgaagtcttcaccatcggcatg
aaccgcgccgtcgaggttctggcccagaaggcgacccgaggccgggcggccccggccgcg
cctctggccgaactgggcgagcatcccgaaggcgggccggttcaggttctggccggccgc
tacggcccctatgtcaaatggggcaaggtcaatgcgaccctgccgcgcgacctggagccc
ggggcggtgacgctggagcgggcgctggagctgatcgccgaaaaggccggcaagtcgggc
aggaaacctgcgaagaagcccgccgccaaggccgaaaaggcccccgccaagaaggccacg
gcgaaaaagcccgcggctaaaaaacccgccgcgaccaagaaggctggcgcccggaaggcc
gagtga
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