Paracoccus mutanolyticus: DPM13_06360
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Entry
DPM13_06360 CDS
T05551
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pmut
Paracoccus mutanolyticus
Brite
KEGG Orthology (KO) [BR:
pmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmut03032
]
DPM13_06360 (gyrB)
03400 DNA repair and recombination proteins [BR:
pmut03400
]
DPM13_06360 (gyrB)
Enzymes [BR:
pmut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DPM13_06360 (gyrB)
DNA replication proteins [BR:
pmut03032
]
Prokaryotic type
DNA Topoisomerases
DPM13_06360 (gyrB)
DNA repair and recombination proteins [BR:
pmut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DPM13_06360 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AWX92911
UniProt:
A0ABM6WQK0
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All DBs
Position
1169277..1171715
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AA seq
812 aa
AA seq
DB search
MNEPAPQPSEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADFVRVKIHADSSVSVRDNGRGIPTDLHPSEGVSAAEVIMTQLHAGGKFDQNSYKVSGG
LHGVGVSVVNALSDWLELRIWRNGKEHYARFENGDTVEHLRVVGDAAPGDKGTEVRFLAS
SREEREDGTFSNRDFVFKTLENRLRELAFLNSGVRIILEDERPAEPLRTELFYEGGVREF
VKFIDRSKTPVMADPIFITGERNGIGVEVAMWWNDSYHETVLPFTNNIPQRDGGTHLAGF
RGALTRVINTYAQTSGAAKREKVDFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEV
RPAVEGLVVEKLSEWFEENPAEAKSILGKIIEAALAREAARKARELTRRKTAMDVASLPG
KLADCQEKDPALSELFIVEGDSAGGSAKQGRSRQNQAVLPLRGKILNVERARFDRMLSSD
QVGTLITALGTGIGRDEFNLGKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQMPELIEAG
HLYIAQPPLYKVSRGRSEVYLKDEAALEDYLIEQGIDGATLRLGNGDTIAGADLARVVDE
ARTARRILRAYPTHYPAHITEQAAIAGALVPGRVDADAQGVANAIAARLDMIAEEYERGW
SGRPTQDAGIRLTRLLRGVEESRTLDGPMLRSGESRRLGAMTEGLTEIYGQTAHLIRKDR
DIPIHGPLSLLQAIFLEGEKGLSLQRYKGLGEMNPEQLWETTLDPAARTMLQVRIEDLSE
ADDIFTKLMGDVVEPRRDFIQQNALSVENLDI
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacccgccccccagccctccgaatacggcgccgattccatcaaggttctcaag
ggcctggaagccgtgcgcaagcgtcccggcatgtatatcggcgataccgacgacggctcg
ggccttcatcacatggtctatgaggtcgtggacaacggcatcgacgaggcgctggccggt
catgccgatttcgtgcgcgtcaagatccacgccgacagcagcgtttcggtgcgcgacaac
gggcgcggcatcccgaccgacctgcatcccagcgaaggcgtctcggcggccgaggtcatc
atgacccagctgcacgcgggcggaaagttcgaccagaacagctacaaggtctcgggcggg
ttgcacggcgtcggtgtttccgtggtcaacgcgctgtcggactggctggaattgcggatc
tggcgcaatggcaaggaacattacgcccgctttgaaaacggcgacacggtcgagcatctg
cgcgtggtcggcgatgccgcgcccggcgacaagggcaccgaggtgcgctttctggcctcg
tcccgcgaagagcgcgaggacggcaccttttccaaccgcgacttcgtgttcaagacgctg
gaaaaccggctgcgcgaactggccttcctgaactcgggcgtgcgcatcatcctggaggac
gagcgcccggccgaacccctgcgcaccgagctgttctatgaaggcggcgtgcgggaattc
gtgaaattcatcgaccgatccaagactccggtcatggccgacccgatcttcatcaccggg
gagcgcaacggcatcggcgtcgaggtggcgatgtggtggaacgacagctaccacgaaact
gtgctgccctttaccaacaacatcccgcagcgcgacgggggcacccatctggcgggcttc
cggggcgcgctgacgcgggtcatcaacacctatgcccagaccagcggcgcggcaaagcgc
gagaaggtcgatttcaccggcgacgacgcgcgcgagggattgacctgcgtgctgtcggtc
aaggtgcccgatcccaagttctccagccagaccaaggacaagctggtgtccagcgaggtg
cgcccggcggtcgaggggctggtggtcgagaagctgtccgagtggttcgaggaaaacccg
gccgaggcgaaatccatcctgggcaagatcatcgaagccgccctggcccgcgaggccgcc
cgcaaggcgcgcgagctgacccggcgcaagaccgcgatggacgtggccagcctgcccggc
aagctggccgattgccaggaaaaggaccccgcactgtcggagctgttcatcgtcgagggc
gactcggccggcggctccgcgaagcagggccgttcgcgccagaaccaggccgtgctgccc
ctgcgcggcaagatcctgaacgtggaacgggcgcgctttgaccgcatgctgtcgagcgac
caggtcggcaccctgatcaccgcgctgggaaccggcatcggccgggacgaattcaacctg
ggcaagctgcgctatcacaagatcgtcatcatgaccgatgccgatgtcgacggcgcccat
atccgcaccctgctgctgaccttcttcttccggcagatgccggagttgatcgaggccggg
catctttatatcgcgcagccgccgctttacaaagtctcgcgcgggcggtccgaggtctat
ctgaaggacgaggcggcgcttgaggattacctgatcgagcagggtatcgacggcgccacg
ctgcggctgggcaacggcgacaccatcgccggcgcggacctggcgcgcgtggtcgacgag
gcccggaccgcgcggcgcatcctgcgcgcctatccgacgcactaccccgcccatatcacc
gagcaggccgccatcgccggcgcgctggtcccgggccgggtcgatgccgatgcgcagggg
gttgccaatgccatcgccgcgcggctggacatgatcgccgaggaatacgaacgcggctgg
tctggccgcccgacccaggacgccggcatccgcctgacccgcctgctgcgcggggtcgag
gaaagccgcaccctggacgggccgatgctgcgcagcggggaaagccggcggctgggcgcc
atgaccgaaggcctgaccgagatctatggccagaccgcgcatctgatccgcaaggatcgc
gacatcccgatccatggcccgctgagtctgctgcaggccatcttcctggaaggcgaaaag
ggcctgtcgttgcaacgctacaagggtctgggcgaaatgaatcccgaacagctgtgggaa
accacgctcgaccccgcggcgcgcacgatgttgcaagtgcgaatcgaggatctgagcgag
gctgacgatattttcaccaagctcatgggcgatgtcgtcgaaccgcgccgggattttatt
caacaaaatgcgctgagtgtcgaaaacttggacatctga
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