Pseudomonas muyukensis: KSS95_03315
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Entry
KSS95_03315 CDS
T07704
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmuy
Pseudomonas muyukensis
Pathway
pmuy03420
Nucleotide excision repair
pmuy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KSS95_03315 (uvrD)
03430 Mismatch repair
KSS95_03315 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmuy03400
]
KSS95_03315 (uvrD)
Enzymes [BR:
pmuy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSS95_03315 (uvrD)
DNA repair and recombination proteins [BR:
pmuy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KSS95_03315 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KSS95_03315 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_22
AAA_11
DUF5681
Motif
Other DBs
NCBI-ProteinID:
QXH35877
LinkDB
All DBs
Position
complement(707202..709385)
Genome browser
AA seq
727 aa
AA seq
DB search
MHNDDLSLLLNSLNDAQRQAVAASQGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASAHSI
LSVTFTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLAQNFQILDSD
DQQRLIKRVIREMGLDEQKWPARQVQWFINGQKDEGLRPRHIQASGDLFLATMRDIYVAY
EQACDRAGVIDFSELLLRALDLWRDQPDLLHHYQRRFRHILVDEFQDTNAVQYAWLRLLA
SGGDSLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAELIRLEQNYRSTGGILKAANALI
ANNSGRLGKELWTDMGEGEPLTLYAAYNEHDEARYVVETIESIIKQGSARNEIAILYRSN
AQSRVLEEALLRERVPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRG
IGEKTVEAIREHARHSQLSMWDAMCQLLAAKALKGRAASALGAFIELLENLAAKVLDMPL
HLMTQTVIEQSGLIIYHQEEKGEKGQARVENLEELVSAARNFETSDEDADLSPLSAFLGH
ASLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNTVSRPFGGA
KTPASSLFANANIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgatgacctctccctcctgctgaactccctcaacgacgcccaacgccaggcc
gtagccgcctcgcaggggcgccaactggtattggccggcgccggctcgggcaagacccgg
gtactggtgcaccgtatcgcctggctgatccaggtcgaacaggcctcggcccattcgatc
ctgtcggtgaccttcaccaacaaggccgcggctgaaatgcgccagcgtatcgagcaactg
ctgggtatcaacccagccggcatgtgggtgggcaccttccacggcctggcgcatcgcttg
ctgcgcgcccactggcaggaagcaggcctggcgcagaacttccagatcctcgacagcgac
gaccagcagcgcctgatcaagcgggtaatccgcgagatgggcctggacgagcaaaagtgg
ccggcgcgccaggtccagtggttcatcaacgggcagaaggacgagggcctgcgcccgcgc
cacatccaggccagcggcgacctgttcctggccaccatgcgcgacatctatgtggcctac
gaacaagcctgtgatcgcgccggggtcatcgatttctccgaactgctgctgcgcgccctc
gacctgtggcgcgaccagccagacctgctgcaccactaccagcgccgcttccggcacatc
ctggtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctcgct
agcggcggcgacagcctgatggcggtgggcgacgacgaccagtcgatctacggctggcgc
ggggcgaagatcgagaacatccaccagtacaccgccgacttccccgacgccgagctgatc
cgcctggagcagaactaccgctccaccggcggcatcctcaaggccgccaacgccttgatc
gccaacaacagcgggcgcctgggcaaggagctgtggaccgatatgggcgagggcgagccg
ctcacgctgtatgccgcgtacaacgagcacgacgaagcgcgctacgtggtcgagaccatc
gaaagcatcatcaagcagggcagcgcgcgcaacgagatcgccatcctgtaccgctccaac
gcccagtcgcgggtgctggaagaagccctgctgcgcgagcgcgtgccctaccgcatctat
ggcggccagcgcttcttcgagcgcgccgagatcaagaacgccatggcctacctgcgcctg
ctcgaaggccgcggcaacgacgccgcgctggaacgggtgatcaacgtgccgccacgcggc
atcggcgagaaaaccgtcgaggcgatccgcgagcacgcccgccacagccagctgtcgatg
tgggacgccatgtgccagctgctcgccgccaaggccctcaagggccgtgccgccagcgcc
ctgggcgcgttcatcgagctgctcgagaacctcgccgccaaggtcttggacatgccgctg
cacctgatgacccagaccgtcatcgagcaatccgggctgatcatctaccaccaggaagaa
aagggcgagaaaggccaggcccgggtggaaaaccttgaggaactggtcagcgccgcgcgc
aacttcgagaccagcgacgaagacgccgacctgtcgccgctgtcggccttcctcggccac
gcctcgctggaggccggcgacacccaggccgacgagcacgaggacagcatccagctgatg
accctgcacagcgccaagggcctggagttcccctacgtgttcctggtgggcatggaagaa
ggcctgttcccgcacaagatgagcctggaagagcccgggcgcctcgaagaggagcgccgc
ctggcctatgtcggcatcacccgggccatgcgtcagctggtgatgacctacgccgagacc
cggcgcctgtatggcagcgagacctacaacaaggtgtcgcgtttcgtccgcgagatcccg
gccgggctggtgcaggaagtacgcctgtcgaacactgtcagccgtccgttcggcggcgcc
aagacacccgccagcagcctgttcgccaatgccaacatcccgcagaccgcattcaacctg
ggccaacgggtgcagcatgcggtattcggcgagggcgtgatcctcaacttcgaggggtcc
ggcgcccaggcccgggtgcaggtgaatttctccgaaggcagcaagtggctgatgctcggt
tacgccaagctggaagcgatctga
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