KEGG   Pseudomonas muyukensis: KSS95_05820
Entry
KSS95_05820       CDS       T07704                                 
Symbol
vapC
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
pmuy  Pseudomonas muyukensis
Brite
KEGG Orthology (KO) [BR:pmuy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pmuy03016]
    KSS95_05820 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pmuy02048]
    KSS95_05820 (vapC)
Transfer RNA biogenesis [BR:pmuy03016]
 Prokaryotic type
  tRNA degradation factors
   KSS95_05820 (vapC)
Prokaryotic defense system [BR:pmuy02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    KSS95_05820 (vapC)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: QXH36350
LinkDB
Position
complement(1288343..1288753)
AA seq 136 aa
MLRYMLDTNICIFTIKNKPQVVRDAFNRYHGQLAISTVTLMELIYGAEKSAAPERNLAIV
EGFAARLDVLDYDIQGAAHTAQLRAELAKAGTPIGPYDRMIAGHARARGLTLVTNNLREF
QRVPGLRVEDWVTHTR
NT seq 411 nt   +upstreamnt  +downstreamnt
atgctcaggtacatgctcgataccaacatctgcattttcaccatcaagaacaagccacag
gtagtacgcgatgcattcaatcgctaccacggccaactggccatcagcacggtaaccctg
atggaactgatctacggtgcggaaaaatccgccgcgccggaacgtaacctggccattgtc
gaggggttcgccgcacggctcgatgtgcttgactacgacatacagggcgccgctcacacc
gcgcagctacgtgcggagctggccaaggccggcacgcccatcggcccctacgacagaatg
attgccggccacgcccgcgctcgcggccttacgctggtgaccaacaacctgcgcgagttc
cagcgtgtaccagggttgcgtgtggaagactgggtgacacacacacgctga

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