Pseudomonas muyukensis: KSS95_06210
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Entry
KSS95_06210 CDS
T07704
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pmuy
Pseudomonas muyukensis
Pathway
pmuy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KSS95_06210 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmuy03400
]
KSS95_06210 (recD)
Enzymes [BR:
pmuy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KSS95_06210 (recD)
DNA repair and recombination proteins [BR:
pmuy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS95_06210 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
RecD_N
UvrD_C_2
Helicase_RecD
AAA_22
SH3_13
Viral_helicase1
UvrD-helicase
AAA_16
SLFN-g3_helicase
AAA_28
AAA_17
nSTAND3
PhoH
T2SSE
NACHT
NTPase_1
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QXH36421
LinkDB
All DBs
Position
1385214..1387289
Genome browser
AA seq
691 aa
AA seq
DB search
MSRRLDDLLPTPLQAEHLNALAPLGDSHDLLALLDRWVERGWLRALDRAFVGFLEERAPG
SDPLVLLAAALASHQLGHGHVCLDLRQTLAEPDFALSLPPEGDALTGPLLLPSQLLGSLD
LGLWLQRIGQSTLVADGDALAQRPRPLVLSGERLYLRRYWTYERRIDATLHQRLARQLPL
QADLPQRLAQLFDGGAPAGEVDWQKLACALATRAGFSVITGGPGTGKTTTVVRLLALLQA
PAVEQGRPLRIRLAAPTGKAAARLTESIGQQVARLQVAAEVREQIPTEVSTVHRLLGSRP
GSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLDALPASARLVLLGDKDQLASVEAGA
VLGDLCRDAEDGCYWPQTLAWLEQVGGQSLAGIGLQAGDEPRKPLAQQIVMLRHSRRFGE
GSGIGQLARLVNRQQAQEARALLATRLDDVFCLTLGGEHDKRFDRLLLDGLNQGAEGPQG
YRSYLRTIGRLRPAPGTPVDDPRWEQWAGEVLRSFEAFQLLCAVRKGAWGVEGLNERVAR
VLHNAGLIDNQQPWYEGRPVLVTRNDYGLGLMNGDIGIALRLPDEQGQALLRVAFPRNDG
SGGVRFVLPSRLSEVETVFAMTVHKSQGSEFSHTALVLPDALNPVLTKELVYTGITRAKH
CFSLIEPRAGVFEEAVERKVRRVSGLMLEQV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagccgacgcctcgacgacctgctgcccaccccgttgcaggccgaacacctcaacgcc
ctggcgccactgggcgacagccatgacttgctggccctgctcgatcgctgggtcgagcgc
ggctggttgcgcgccctcgaccgggcgttcgtcggcttcctcgaggagcgcgcgcccggc
agcgatccgctggtgctgctggcggcggcgttggccagccaccagctgggccatggccat
gtctgcctcgacctgcgccagacccttgccgagccggattttgccctgtcgttgccgccg
gaaggggatgccctgaccggccccctgctgctgccctcgcagttgctgggcagcctcgac
ctggggctgtggttgcagcgcatcggccagagcaccctggtggccgatggcgacgccctt
gcgcaacgcccgcggcccttggtgcttagtggtgaacgcctgtacctgcgccgctactgg
acctacgagcggcgcatcgacgccacgctgcaccagcgcctggcccggcagctgccgttg
caggccgacttgccgcagcgcctggcgcagttgttcgacggcggcgcccccgcaggcgag
gtggactggcaaaagcttgcctgtgccctggcgacccgcgccggtttcagcgtgatcacc
ggtggcccgggtactggcaagaccaccacggtggtgcgcctgctggcgctgttgcaggcg
ccggcggtcgagcaggggcggccgctgcgtatccgcctggcagcgccgaccggcaaggcc
gcggcacgcctgaccgaatccattggccaacaggtggcgcgcctgcaagtggcggccgag
gtgcgcgagcagatccccaccgaggtcagcaccgtgcaccgcctgctgggcagccgccca
gggtcgcggcacttccgccatcacgcgggcaatcccttgccgctggacgtgctggtggtc
gacgaggcgtcgatgatcgacctggaaatgatggccaacctgctcgatgccctgccggcc
agcgcgcgcctggtgctgctgggcgacaaggaccagttggcctcggtggaagccggcgcg
gtgctgggggacctgtgccgggatgccgaggatggctgctactggccgcagaccctggcc
tggctggagcaggtgggggggcagtcgctggccggcatcggcttgcaggcgggcgatgag
ccgcgcaagccactggcccagcagattgtcatgctgcgccattcccgacgctttggtgag
ggcagcggcatcggccagctggcgcggctggtcaaccgccagcaggcgcaggaggcgcgg
gcgctgctggccacccggctcgacgatgtgttctgcctgacgctcggtggcgagcacgac
aagcgcttcgatcgcctgctgctcgatggcctcaaccagggcgcagagggcccgcaaggc
taccgcagctacctgcgcacgattggccgcttgcgcccggcgccgggcacgcccgtcgac
gatccgcgctgggagcaatgggccggcgaggtgctgcgcagtttcgaggcgttccagttg
ctgtgcgcggtgcgcaagggcgcctggggcgtcgaagggctgaacgaacgggtcgcccgg
gtgctgcacaatgccgggctgatcgacaaccagcaaccctggtacgagggccgcccggtg
ctggtgacgcgcaacgactacggccttggcctgatgaacggtgatatcggcattgccctg
cgcctgccggacgagcagggccaggcgctgctgcgggtggccttcccgcgcaacgacggc
agtggtggcgtgcgtttcgtcctgcccagccgcctcagcgaagtggaaaccgtgttcgcc
atgaccgtgcacaagtcccagggctcggagttcagccataccgcgctggtgctgcccgac
gcactgaacccggtgctgaccaaggagctggtgtacaccggcatcacccgcgccaagcac
tgcttcagcctgatcgagccgcgcgccggggtgttcgaggaggctgtggagcgcaaggtc
aggcgggtgtcggggctgatgctggagcaagtctga
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