Pseudomonas muyukensis: KSS95_10345 Help Entry KSS95_10345       CDS       T07704                                  Symbol rne Name (GenBank) ribonuclease E   KO K08300   ribonuclease E [EC:3.1.26.12] Organism pmuy  Pseudomonas muyukensis Pathway pmuy03018   RNA degradation Brite KEGG Orthology (KO) [BR:pmuy00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     KSS95_10345 (rne)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pmuy03019]     KSS95_10345 (rne)    03009 Ribosome biogenesis [BR:pmuy03009]     KSS95_10345 (rne) Enzymes [BR:pmuy01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.26  Endoribonucleases producing 5'-phosphomonoesters     3.1.26.12  ribonuclease E      KSS95_10345 (rne) Messenger RNA biogenesis [BR:pmuy03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      KSS95_10345 (rne) Ribosome biogenesis [BR:pmuy03009]  Prokaryotic type   rRNA processing factors    KSS95_10345 (rne) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_E_G RNase_E_G_Thio S1 Motif Other DBs NCBI-ProteinID:  QXH37198 LinkDB All DBs Position complement(2288255..2291485) Genome browser AA seq 1076 aa AA seqDB search MKRMLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGKITRIEPSLEAAFVDF GSERHGFLPLKEISREYFKKAPEGRVNIKEVLSEGQEVIVQVEKEERGNKGAALTTFISL AGRYLVLMPNNPRAGGISRRIEGEERNELREALNGLTVPGDMGLIVRTAGLGRSSEEMQW DLDYLLQLWTAIKEASQDRVAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSIDAQEEALT FIRQVMPQYASKVKLYEDSVPLFNRFQIESQIETAFQRVVDLPSGGSIVIDPTEALVSID INSARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEERV RECLEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCSGTGIIRDVESLSLAI LRLIEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRTRARIIILPNDHLETPHF EVQRLRDDNPEVLNNQSSYEIAAAETEEAPQPTATRTLVRQEAAVKTAPARANAPVPSAV EEQPAAPVAPVQHVAEPSLFKGLVKSLVSLFAGKDEPAAAPAVSTEKPATERPARNEERR NGRQQSRNRNGRRDEDRKPREERSERAPREERQPREERAPREERAPREERAPREERQPRQ PREDRRGNREERVRELREPLDATPAVAREERQPREERAPREERVAREERAPREERAPREE RAPREERQPREERAPREERAPREERAPREERQPRPPREERQPRPDEQVAEQAAELVEEQL PNEELLQDEQEGADGERPRRRSRGQRRRSNRRERQRNANGELIDGGDEDAGEEQQPQQHQ ATELGAELAAGIAVTAAVATSNISAEADAEANQQAERATAVVEQAQVEAVEVVAEQAEQV EQVEIAPAVEQPVSEPVVAVEPSIEPVVEVAPQPVIEEAVAEQPAAAVPAPAEPAAVEPA PVVEAGEIEQAQVVEAAEVEAPVAEQPAPVAEAQPEVVEAPVAEPAPVVAEQTPVEAPVE PATVMLSNGRAPNDPREVRRRKREAEAAAAAAAQAAAEAAPAPALDTADEHKPHHG NT seq 3231 nt NT seq  +upstreamnt  +downstreamnt atgaaaagaatgctgattaacgcaactcaacccgaagagttgcgtgtagccctggtggac ggccaacgcctctacgacctggacatcgagtccggtgcccgtgagcagaaaaaggccaac atctacaaaggcaagatcacccggatcgagcccagccttgaagccgccttcgtcgacttc ggctccgaacgtcacggcttcctgccgctgaaagaaatctcccgcgaatacttcaagaaa gcccctgaaggtcgggtcaacatcaaggaagtgctgagcgaaggccaggaagtcatcgtc caggtcgagaaggaagagcgcggcaacaaaggcgccgccctgaccaccttcatcagcctg gccggccgctacctggtgctgatgcccaacaacccgcgcgccggtggcatctcccgccgc atcgaaggcgaagagcgcaacgaactgcgcgaagcgctgaacggcctcaccgttccgggc gacatgggcctgatcgtgcgcaccgcgggcctgggccgcagcagcgaagaaatgcagtgg gacctcgactacctgctgcagctgtggaccgccatcaaggaagcctcgcaagaccgcgtc gcgccgttcctgatctaccaggaaagcaacgtcatcattcgcgccatccgcgactacctg cgccaggacatcggcgaagtgctgatcgacagcatcgacgcccaggaagaagccctgacc ttcatccgccaggtgatgccgcagtacgccagcaaggtgaagctgtacgaagacagcgtg ccgctgttcaaccgcttccagatcgaaagccagatcgagaccgccttccagcgcgtcgtc gacctgccgtccggcggctcgatcgtcatcgacccgaccgaggccctggtctccatcgac atcaactcggcgcgcgccaccaagggcagcgacatcgaggaaaccgcgctgcagaccaac ctggaagcggccgaggaaatcgcccgccagctgcgcctgcgtgatatcggcggcctgatc gtcatcgacttcatcgacatgaccccggcgaagaaccagcgcgccgtcgaagaacgcgtg cgtgaatgcctggaggccgaccgcgcccgcgtacaggtaggccgtatctcgcgcttcggc ctgctggagatgtcgcgccaacgcctgcgcccgtcgctgggtgaaagcagcggcatcgtc tgcccacgctgctcgggcaccggcatcatccgtgacgtcgagtcgctgtcgctggcgatc ctgcgcctgatcgaggaagaagccctgaaggaccgcaccgccgaggttcgcgcccaggtg ccgatcccggtggccgccttcctgctcaacgagaagcgcaactcgatcaccaagatcgaa ctgcgcacccgcgcgcgcatcatcatcctgccgaacgatcacctggaaaccccgcacttc gaagtccagcgcctgcgcgacgacaacccggaagtgctgaacaaccagtccagctacgag atcgccgccgccgaaaccgaagaagcgccgcaaccgaccgccacccgtaccctggtgcgc caggaagccgcggtgaaaaccgcgccggcccgcgccaacgccccggtgccgagcgctgtc gaagagcagccagccgcgccggtcgcgccggtccagcacgttgccgagccaagcctgttc aagggcctggtcaagtcgctggtcagcctgttcgccggcaaggacgaacctgccgccgcc ccggccgtgagcaccgagaagccggctaccgagcgcccagcgcgcaacgaggagcgccgc aacggtcgccagcagagccgcaaccgcaatggccgccgcgacgaagaccgcaagccgcgc gaagagcgcagcgaacgtgctccgcgtgaagagcgccagccccgtgaagaacgcgcccct cgcgaggaacgtgcaccacgtgaagaacgcgccccacgcgaagagcgtcagccacgtcag ccgcgcgaagaccgccgtggcaaccgcgaagagcgcgtgcgtgaactgcgcgagccgctg gacgccaccccagccgtcgcccgcgaagagcgccagccccgtgaagaacgtgccccgcgc gaagaacgtgtagcccgcgaagagcgtgccccacgtgaagaacgtgcaccacgcgaagag cgcgccccacgcgaagagcgccagccacgcgaggaacgtgccccgcgtgaagagcgcgcg ccacgcgaagagcgtgccccgcgtgaagaacgccagccgcgtccgccgcgcgaagagcgc cagccgcgccctgacgagcaggttgccgaacaggccgccgagctggtcgaagagcagttg ccgaacgaagagctgctgcaggacgagcaggaaggcgccgatggcgagcgtccacgccgc cgttcccgtggccagcgtcgtcgcagcaaccgccgcgagcgccagcgcaacgccaatggc gagctgatcgatggcggcgacgaagacgccggtgaagagcagcagccacagcagcaccag gccaccgagctgggtgccgaattggccgccggcatcgccgtcaccgccgccgttgccacc agcaacatcagcgccgaagccgacgccgaagccaaccagcaggctgagcgcgccaccgcg gtggtcgagcaggcccaggtcgaagccgtcgaggtcgtcgccgagcaagccgagcaggtc gagcaggtcgagatcgccccagcggtcgagcaacctgtcagcgagccggtcgtcgccgtc gagccgagcatcgagcccgtggttgaagtcgcgccacaaccagtgatcgaagaagccgtc gccgagcagcctgccgccgccgtcccagcccctgcagaacctgcagcggtcgaaccagcc cctgtggttgaagccggtgagatcgagcaggcccaggttgtcgaagcggccgaagtcgag gcacccgttgccgagcagcctgctccggtagccgaagcccagcctgaagtggtcgaagcg ccagtcgccgagcctgctccagtggttgccgagcagaccccggtcgaagcgccggtcgag cccgctaccgtcatgctgtccaacggccgcgcgccgaacgacccacgtgaagtgcgtcgt cgcaagcgtgaagccgaagccgcagccgccgctgctgcccaggccgccgccgaagcagcc ccggcaccggcgctggacaccgccgatgagcacaagcctcatcacggttga

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