Pseudomonas muyukensis: KSS95_16385
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Entry
KSS95_16385 CDS
T07704
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pmuy
Pseudomonas muyukensis
Pathway
pmuy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmuy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KSS95_16385
09124 Replication and repair
03420 Nucleotide excision repair
KSS95_16385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmuy03021
]
KSS95_16385
03036 Chromosome and associated proteins [BR:
pmuy03036
]
KSS95_16385
03400 DNA repair and recombination proteins [BR:
pmuy03400
]
KSS95_16385
Enzymes [BR:
pmuy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KSS95_16385
Transcription machinery [BR:
pmuy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KSS95_16385
Chromosome and associated proteins [BR:
pmuy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
KSS95_16385
DNA repair and recombination proteins [BR:
pmuy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KSS95_16385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
DUF7711
Motif
Other DBs
NCBI-ProteinID:
QXH33747
LinkDB
All DBs
Position
complement(3665504..3667759)
Genome browser
AA seq
751 aa
AA seq
DB search
MSYTVAVRALCEFSAKAGDLDLRFTPSPTAEEGMAGHRRVVARRGAGYEAEVTLEGEYQG
LRVRGRADGYDPARNRLEEIKTHRGDLARQPANHRQLHWAQAKVYGWLLCQARQLADIEL
ALVYLEVDNDRQTLVSERHGADELRQFFESQCQCFLAWAQAQAQRLAERDLGLQALRFPY
PAFRQGQRQLAETLYKAVSTGRCLMAQASTGIGKTLGTLFPLLKAVVPQQLDKLYFLTAK
TPGRALALDALRQITQACAQPALRSLELIARDKACEFPDKACHGESCPLARGFYDRLPAA
RAAAAQVPLLDRATLREVALAHQVCPYYLGQEMARWVDVLVADYNYYFDAHALLFGLAQV
NQWRTAVLVDEAHNLVERGRQMYSASLDQGRLLALRQSKPAGLGSALDRLNRQWNALYKA
QMAPYQAAEQLPEAFLGALQQCIGLIQERMNQAPSDVEPAVLEFFYQALQFSRVAELFDP
HFLFDITQRSGPRGRRLATLCLRNVVPARLLGPRMSAARSVTLFSATLNPQHYYRDLLGM
PADTAWLEVAAPFRGEQLQVRIVSEVSTRYQQRQASLAPIVALIAAQYRRQPGNYLAFFS
SFEYLEQVAGLLAATHPGIPQWRQAPGMDESSREAFLARFVEGGQGVGFAVLGGAFGEGV
DLPGTRLIGAFVATLGLPQVNPVNEQFKQRLGRQFGAGFDYAYLYPGVRKVIQAAGRVIR
GEQDRGVLLLIDERFAEPRVRQMFPSWWHCA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaccgttgccgtgcgggccctgtgcgagttcagcgccaaggctggcgacctg
gacctgcggttcaccccgtcgcctactgccgaggaaggcatggccggtcatcgccgggta
gtggcccggcgcggggccgggtatgaagccgaggtgacgctcgagggcgagtaccagggc
ctgcgcgtccgtggccgagccgatggctacgacccggcgcgcaaccgcctggaagagatc
aagacccaccgtggcgacctggctcgccagccggccaaccatcgccagttgcactgggcc
caggccaaggtctacggctggctgctgtgccaggcgcggcaactggcggacatcgagctg
gccctggtgtacctggaggtggacaacgatcgccagacccttgtcagcgagcgccatggc
gccgacgaactgcgccagttcttcgaaagccagtgccagtgctttctggcctgggcgcaa
gcgcaggcccagcgcctggccgagcgcgacctggggctgcaggcgctgcgttttccctat
cctgcgttccgccagggccagcggcagctggccgagacgctgtacaaggccgtgagcacc
ggccgctgcctgatggcccaggccagcaccggtatcggcaagaccctcggcacgctgttc
ccgctgctcaaggcggtggtaccgcagcaactggacaagctgtacttcctgaccgccaag
acgcccggccgcgccctggcgctggatgccttgcggcaaatcacccaggcctgcgcgcaa
ccggcgctgcgtagcctcgaactgatcgcgcgcgacaaggcctgcgaatttccggacaag
gcctgccatggcgagtcatgcccgttggcgcgggggttctacgaccgcttgccggccgcc
cgcgcggcggcggcgcaagtgccgttgctcgaccgtgcgacactgcgcgaggtggccctg
gcgcatcaggtctgcccgtattacctgggccaggagatggcgcgctgggtcgacgtgctg
gtggccgactacaactactatttcgacgcccacgccttgttgttcggcctggcccaggtc
aaccagtggcgcaccgcggtgctggtggacgaagcgcacaacctggtggagcgcggtcga
cagatgtacagcgccagcctcgaccagggccggttgctggccctgcgccagagcaagccg
gccgggttgggcagcgcccttgaccgcctgaatcggcagtggaacgcgttgtacaaggcg
cagatggcgccgtaccaggcggccgagcaattgcccgaagccttcctgggggcgttgcaa
cagtgcatcgggctgatccaggagcgcatgaaccaggccccgagcgacgtcgagcccgct
gtgctggagttcttctaccaggcgttgcagttcagccgggtcgccgaactgttcgacccg
cacttcctgttcgacatcacccagcgtagcgggccgcgtggccggcgcctggccacgttg
tgcctgcgcaacgtggtgccggcgcggctgctggggccgcggatgagcgcggcgcgcagt
gtcaccttgttctccgccaccctcaatccgcagcactattaccgcgacctgctgggcatg
ccggccgacacggcctggctggaagtcgccgcgccgtttcgcggcgagcagctccaggta
cgcatcgtcagcgaggtgtcgacccgataccagcagcgccaggcctcgctggcgccgatc
gtcgcgttgatcgccgcccagtaccgtcgccagccgggcaactacctggcgttcttcagc
agtttcgaatacctggaacaggtggccgggttgctggccgcgacccaccccggcattccc
cagtggcgccaggcaccgggcatggacgaaagcagtcgcgaggcgtttctggcgcgtttc
gtcgagggcgggcagggcgttggtttcgccgtgctcggcggtgcgttcggcgaaggcgtg
gacctgccgggcacgcgcctgatcggcgcctttgtcgccaccctggggctgccccaggtc
aacccggtcaacgagcagttcaagcagcgcctgggccggcagtttggcgcgggcttcgac
tacgcctacctgtaccccggggtgcgcaaggtgatccaggcggcgggccgggtcatccgt
ggcgagcaggaccgtggcgtgctgctgctgatcgacgagcgtttcgccgagccgcgggtg
cgacagatgttccccagctggtggcactgcgcctga
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